RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 L3MBTL3Q96JM7 780 aaPredicted RBP28.66■■■□□ 2.18
TMEM248-207ENST00000607045 TAF1DQ9H5J8 278 aaPredicted RBP28.66■■■□□ 2.18
TMEM248-207ENST00000607045 MYBBP1AQ9BQG0 1328 aaKnown RBP28.66■■■□□ 2.18
TMEM248-207ENST00000607045 TCERG1O14776 1098 aaKnown RBP28.65■■■□□ 2.18
TMEM248-207ENST00000607045 KRT24Q2M2I5 525 aa28.65■■■□□ 2.18
TMEM248-207ENST00000607045 FZD9O00144 591 aa28.64■■■□□ 2.18
TMEM248-207ENST00000607045 LMOD3Q0VAK6 560 aa28.64■■■□□ 2.18
TMEM248-207ENST00000607045 COPS6Q7L5N1 327 aa28.64■■■□□ 2.18
TMEM248-207ENST00000607045 TRIM35Q9UPQ4 493 aa28.64■■■□□ 2.18
TMEM248-207ENST00000607045 IQCA1LA6NCM1 817 aa28.63■■■□□ 2.17
TMEM248-207ENST00000607045 CHL1O00533 1208 aa28.63■■■□□ 2.17
TMEM248-207ENST00000607045 AIMP1Q12904 312 aaKnown RBP28.63■■■□□ 2.17
TMEM248-207ENST00000607045 PPP1R42Q7Z4L9 355 aa28.63■■■□□ 2.17
TMEM248-207ENST00000607045 RBM17Q96I25 401 aaKnown RBP28.63■■■□□ 2.17
TMEM248-207ENST00000607045 PSMD1Q99460 953 aa28.63■■■□□ 2.17
TMEM248-207ENST00000607045 ADAMTS8Q9UP79 889 aa28.63■■■□□ 2.17
TMEM248-207ENST00000607045 LAS1LQ9Y4W2 734 aaKnown RBP28.63■■■□□ 2.17
TMEM248-207ENST00000607045 CRAMP1Q96RY5 1269 aa28.62■■■□□ 2.17
TMEM248-207ENST00000607045 SNED1Q8TER0 1413 aa28.61■■■□□ 2.17
TMEM248-207ENST00000607045 PARP10Q53GL7 1025 aa28.61■■■□□ 2.17
TMEM248-207ENST00000607045 SLC10A5Q5PT55 438 aa28.61■■■□□ 2.17
TMEM248-207ENST00000607045 CC2D2BQ6DHV5 1058 aa28.61■■■□□ 2.17
TMEM248-207ENST00000607045 XAGE3Q8WTP9 111 aa28.61■■■□□ 2.17
TMEM248-207ENST00000607045 RUNDC1Q96C34 613 aa28.61■■■□□ 2.17
TMEM248-207ENST00000607045 UTP14AQ9BVJ6 771 aaKnown RBP28.61■■■□□ 2.17
TMEM248-207ENST00000607045 IBTKQ9P2D0 1353 aaPredicted RBP28.61■■■□□ 2.17
TMEM248-207ENST00000607045 COL13A1Q5TAT6 717 aaPredicted RBP28.6■■■□□ 2.17
TMEM248-207ENST00000607045 NLRP3Q96P20 1036 aa28.6■■■□□ 2.17
TMEM248-207ENST00000607045 EAPPQ56P03 285 aaPredicted RBP28.59■■■□□ 2.17
TMEM248-207ENST00000607045 LDHDQ86WU2 507 aa28.59■■■□□ 2.17
TMEM248-207ENST00000607045 HACL1Q9UJ83 578 aa28.59■■■□□ 2.17
TMEM248-207ENST00000607045 WDR43Q15061 677 aaKnown RBP eCLIP28.58■■■□□ 2.17
TMEM248-207ENST00000607045 JDP2Q8WYK2 163 aa28.58■■■□□ 2.17
TMEM248-207ENST00000607045 PPEF1O14829 653 aaPredicted RBP28.57■■■□□ 2.16
TMEM248-207ENST00000607045 ZNF428Q96B54 188 aa28.57■■■□□ 2.16
TMEM248-207ENST00000607045 EPHX2P34913 555 aa28.56■■■□□ 2.16
TMEM248-207ENST00000607045 RIC1Q4ADV7 1423 aa28.56■■■□□ 2.16
TMEM248-207ENST00000607045 RNF123Q5XPI4 1314 aa28.56■■■□□ 2.16
TMEM248-207ENST00000607045 NLRP10Q86W26 655 aa28.56■■■□□ 2.16
TMEM248-207ENST00000607045 DDX21Q9NR30 783 aaKnown RBP eCLIP28.56■■■□□ 2.16
TMEM248-207ENST00000607045 CREBZFQ9NS37 354 aa28.56■■■□□ 2.16
TMEM248-207ENST00000607045 CLEC11AQ9Y240 323 aa28.56■■■□□ 2.16
TMEM248-207ENST00000607045 PASKQ96RG2 1323 aa28.55■■■□□ 2.16
TMEM248-207ENST00000607045 ITGBL1O95965 494 aaPredicted RBP28.55■■■□□ 2.16
TMEM248-207ENST00000607045 HCLS1P14317 486 aaPredicted RBP28.55■■■□□ 2.16
TMEM248-207ENST00000607045 TCIRG1Q13488 830 aa28.55■■■□□ 2.16
TMEM248-207ENST00000607045 GPC2Q8N158 579 aa28.55■■■□□ 2.16
TMEM248-207ENST00000607045 MKRN1Q9UHC7 482 aaKnown RBP28.55■■■□□ 2.16
TMEM248-207ENST00000607045 GJA3Q9Y6H8 435 aa28.55■■■□□ 2.16
TMEM248-207ENST00000607045 LARGE2Q8N3Y3 721 aa28.53■■■□□ 2.16
TMEM248-207ENST00000607045 CHPF2Q9P2E5 772 aa28.53■■■□□ 2.16
TMEM248-207ENST00000607045 COL4A5P29400 1685 aa28.52■■■□□ 2.16
TMEM248-207ENST00000607045 EIF6P56537 245 aaKnown RBP28.52■■■□□ 2.16
TMEM248-207ENST00000607045 GRIPAP1Q4V328 841 aa28.52■■■□□ 2.16
TMEM248-207ENST00000607045 HSP90AB3PQ58FF7 597 aa28.52■■■□□ 2.16
TMEM248-207ENST00000607045 ATP6V0A2Q9Y487 856 aa28.52■■■□□ 2.16
TMEM248-207ENST00000607045 HSPA1AP0DMV8 641 aaKnown RBP28.51■■■□□ 2.15
TMEM248-207ENST00000607045 HSPA1BP0DMV9 641 aaKnown RBP28.51■■■□□ 2.15
TMEM248-207ENST00000607045 PRKRIP1Q9H875 184 aaPredicted RBP28.51■■■□□ 2.15
TMEM248-207ENST00000607045 TRMT112Q9UI30 125 aaKnown RBP28.51■■■□□ 2.15
TMEM248-207ENST00000607045 ABCC4O15439 1325 aa28.5■■■□□ 2.15
TMEM248-207ENST00000607045 MAP1SQ66K74 1059 aaPredicted RBP28.5■■■□□ 2.15
TMEM248-207ENST00000607045 SCN4AP35499 1836 aa28.49■■■□□ 2.15
TMEM248-207ENST00000607045 HDGFL1Q5TGJ6 251 aa28.49■■■□□ 2.15
TMEM248-207ENST00000607045 PNMA8AQ86V59 439 aaPredicted RBP28.49■■■□□ 2.15
TMEM248-207ENST00000607045 CNTROBQ8N137 903 aa28.48■■■□□ 2.15
TMEM248-207ENST00000607045 CFAP44Q96MT7 982 aa28.48■■■□□ 2.15
TMEM248-207ENST00000607045 BBOX1O75936 387 aa28.47■■■□□ 2.15
TMEM248-207ENST00000607045 EPS15P42566 896 aa28.47■■■□□ 2.15
TMEM248-207ENST00000607045 AOC3Q16853 763 aa28.47■■■□□ 2.15
TMEM248-207ENST00000607045 ANKRD13DQ6ZTN6 518 aa28.47■■■□□ 2.15
TMEM248-207ENST00000607045 PPIP5K2O43314 1243 aa28.46■■■□□ 2.15
TMEM248-207ENST00000607045 DUSP27Q5VZP5 1158 aa28.46■■■□□ 2.15
TMEM248-207ENST00000607045 SP8Q8IXZ3 490 aa28.46■■■□□ 2.15
TMEM248-207ENST00000607045 TMX4Q9H1E5 349 aaPredicted RBP28.46■■■□□ 2.15
TMEM248-207ENST00000607045 SH3TC1Q8TE82 1336 aa28.45■■■□□ 2.15
TMEM248-207ENST00000607045 TMEM88BA6NKF7 163 aa28.45■■■□□ 2.14
TMEM248-207ENST00000607045 SCNN1DP51172 638 aa28.45■■■□□ 2.14
TMEM248-207ENST00000607045 NIM1KQ8IY84 436 aa28.45■■■□□ 2.14
TMEM248-207ENST00000607045 PLBD2Q8NHP8 589 aa28.45■■■□□ 2.14
TMEM248-207ENST00000607045 MBIPQ9NS73 344 aa28.45■■■□□ 2.14
TMEM248-207ENST00000607045 ATP5J2-PTCD1G3V325 749 aa28.44■■■□□ 2.14
TMEM248-207ENST00000607045 APAF1O14727 1248 aa28.44■■■□□ 2.14
TMEM248-207ENST00000607045 DBF4Q9UBU7 674 aaPredicted RBP28.44■■■□□ 2.14
TMEM248-207ENST00000607045 HOXB7P09629 217 aa28.43■■■□□ 2.14
TMEM248-207ENST00000607045 DDX46Q7L014 1031 aaKnown RBP28.43■■■□□ 2.14
TMEM248-207ENST00000607045 ISCA1Q9BUE6 129 aa28.43■■■□□ 2.14
TMEM248-207ENST00000607045 RTFDC1Q9BY42 306 aaPredicted RBP28.43■■■□□ 2.14
TMEM248-207ENST00000607045 ZNF853P0CG23 659 aa28.42■■■□□ 2.14
TMEM248-207ENST00000607045 DPP8Q6V1X1 898 aaPredicted RBP28.42■■■□□ 2.14
TMEM248-207ENST00000607045 MPNDQ8N594 471 aa28.42■■■□□ 2.14
TMEM248-207ENST00000607045 FAM89AQ96GI7 184 aa28.42■■■□□ 2.14
TMEM248-207ENST00000607045 CNTNAP1P78357 1384 aa28.41■■■□□ 2.14
TMEM248-207ENST00000607045 LMOD1P29536 600 aaPredicted RBP28.41■■■□□ 2.14
TMEM248-207ENST00000607045 VEGFBP49765 207 aa28.41■■■□□ 2.14
TMEM248-207ENST00000607045 CXCL9Q07325 125 aa28.41■■■□□ 2.14
TMEM248-207ENST00000607045 VPS33BQ9H267 617 aa28.41■■■□□ 2.14
TMEM248-207ENST00000607045 ELL2O00472 640 aaPredicted RBP28.4■■■□□ 2.14
TMEM248-207ENST00000607045 FMR1Q06787 632 aaKnown RBP eCLIP28.4■■■□□ 2.147e-6■□□□□ 8.9
TMEM248-207ENST00000607045 GRAPQ13588 217 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms