RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 UBR3Q6ZT12 1888 aa17.01■□□□□ 0.31
HLA-F-230ENST00000606273 PPP4CP60510 307 aa17■□□□□ 0.31
HLA-F-230ENST00000606273 DALRD3Q5D0E6 543 aaKnown RBP17■□□□□ 0.31
HLA-F-230ENST00000606273 KIAA1551Q9HCM1 1747 aa17■□□□□ 0.31
HLA-F-230ENST00000606273 TIMELESSQ9UNS1 1208 aa17■□□□□ 0.31
HLA-F-230ENST00000606273 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
HLA-F-230ENST00000606273 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
HLA-F-230ENST00000606273 RGS20O76081 388 aa16.98■□□□□ 0.31
HLA-F-230ENST00000606273 VEGFAP15692 232 aaPredicted RBP16.98■□□□□ 0.31
HLA-F-230ENST00000606273 PADI6Q6TGC4 694 aa16.98■□□□□ 0.31
HLA-F-230ENST00000606273 TTC13Q8NBP0 860 aa16.98■□□□□ 0.31
HLA-F-230ENST00000606273 RTCBQ9Y3I0 505 aaKnown RBP16.98■□□□□ 0.31
HLA-F-230ENST00000606273 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
HLA-F-230ENST00000606273 N4BP2Q86UW6 1770 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-230ENST00000606273 GYS1P13807 737 aa16.97■□□□□ 0.31
HLA-F-230ENST00000606273 HSP90AB2PQ58FF8 381 aa16.97■□□□□ 0.31
HLA-F-230ENST00000606273 KIF13BQ9NQT8 1826 aa16.96■□□□□ 0.31
HLA-F-230ENST00000606273 KCNC4Q03721 635 aa16.96■□□□□ 0.31
HLA-F-230ENST00000606273 PUS7Q96PZ0 661 aaKnown RBP16.96■□□□□ 0.31
HLA-F-230ENST00000606273 RTL1A6NKG5 1358 aa16.96■□□□□ 0.31
HLA-F-230ENST00000606273 RGPD2P0DJD1 1756 aa16.96■□□□□ 0.31
HLA-F-230ENST00000606273 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
HLA-F-230ENST00000606273 TMOD3Q9NYL9 352 aa16.95■□□□□ 0.3
HLA-F-230ENST00000606273 GLTPD2A6NH11 291 aa16.94■□□□□ 0.3
HLA-F-230ENST00000606273 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
HLA-F-230ENST00000606273 RFC4P35249 363 aa16.93■□□□□ 0.3
HLA-F-230ENST00000606273 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
HLA-F-230ENST00000606273 PRDM10Q9NQV6 1147 aa16.93■□□□□ 0.3
HLA-F-230ENST00000606273 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
HLA-F-230ENST00000606273 INSRP06213 1382 aa16.92■□□□□ 0.3
HLA-F-230ENST00000606273 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
HLA-F-230ENST00000606273 FOXN1O15353 648 aa16.92■□□□□ 0.3
HLA-F-230ENST00000606273 CHRNA5P30532 468 aa16.92■□□□□ 0.3
HLA-F-230ENST00000606273 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
HLA-F-230ENST00000606273 SLC4A9Q96Q91 983 aa16.92■□□□□ 0.3
HLA-F-230ENST00000606273 RPS6KA4O75676 772 aa16.91■□□□□ 0.3
HLA-F-230ENST00000606273 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
HLA-F-230ENST00000606273 POTECB2RU33 542 aa16.9■□□□□ 0.3
HLA-F-230ENST00000606273 FYB1O15117 783 aa16.9■□□□□ 0.3
HLA-F-230ENST00000606273 MKRN1Q9UHC7 482 aaKnown RBP16.9■□□□□ 0.3
HLA-F-230ENST00000606273 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
HLA-F-230ENST00000606273 C4AP0C0L4 1744 aa16.88■□□□□ 0.29
HLA-F-230ENST00000606273 RNF40O75150 1001 aa16.88■□□□□ 0.29
HLA-F-230ENST00000606273 LMNB1P20700 586 aa16.88■□□□□ 0.29
HLA-F-230ENST00000606273 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
HLA-F-230ENST00000606273 RASSF7Q02833 373 aa16.88■□□□□ 0.29
HLA-F-230ENST00000606273 FAM161AQ3B820 660 aa16.88■□□□□ 0.29
HLA-F-230ENST00000606273 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
HLA-F-230ENST00000606273 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
HLA-F-230ENST00000606273 ITGB4P16144 1822 aa16.87■□□□□ 0.29
HLA-F-230ENST00000606273 DDR1Q08345 913 aa16.87■□□□□ 0.29
HLA-F-230ENST00000606273 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
HLA-F-230ENST00000606273 BRCA1P38398 1863 aaKnown RBP16.86■□□□□ 0.29
HLA-F-230ENST00000606273 PHKG2P15735 406 aa16.86■□□□□ 0.29
HLA-F-230ENST00000606273 CTCFP49711 727 aaPredicted RBP16.86■□□□□ 0.29
HLA-F-230ENST00000606273 IFNL2Q8IZJ0 200 aa16.86■□□□□ 0.29
HLA-F-230ENST00000606273 CNTNAP4Q9C0A0 1308 aa16.86■□□□□ 0.29
HLA-F-230ENST00000606273 ARFGEF1Q9Y6D6 1849 aa16.85■□□□□ 0.29
HLA-F-230ENST00000606273 FLT4P35916 1363 aa16.85■□□□□ 0.29
HLA-F-230ENST00000606273 KDRP35968 1356 aa16.85■□□□□ 0.29
HLA-F-230ENST00000606273 PTGDRQ13258 359 aa16.84■□□□□ 0.29
HLA-F-230ENST00000606273 SRP68Q9UHB9 627 aaKnown RBP16.84■□□□□ 0.29
HLA-F-230ENST00000606273 TM4SF1P30408 202 aa16.83■□□□□ 0.28
HLA-F-230ENST00000606273 TJAP1Q5JTD0 557 aa16.83■□□□□ 0.28
HLA-F-230ENST00000606273 SWT1Q5T5J6 900 aaKnown RBP16.83■□□□□ 0.28
HLA-F-230ENST00000606273 KIF24Q5T7B8 1368 aa16.83■□□□□ 0.28
HLA-F-230ENST00000606273 ABHD8Q96I13 439 aa16.83■□□□□ 0.28
HLA-F-230ENST00000606273 EYA1Q99502 592 aa16.83■□□□□ 0.28
HLA-F-230ENST00000606273 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
HLA-F-230ENST00000606273 SEMA3EO15041 775 aa16.82■□□□□ 0.28
HLA-F-230ENST00000606273 CNTNAP1P78357 1384 aa16.81■□□□□ 0.28
HLA-F-230ENST00000606273 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
HLA-F-230ENST00000606273 LBX1P52954 281 aa16.81■□□□□ 0.28
HLA-F-230ENST00000606273 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
HLA-F-230ENST00000606273 TESK2Q96S53 571 aa16.81■□□□□ 0.28
HLA-F-230ENST00000606273 NCAPD2Q15021 1401 aa16.8■□□□□ 0.28
HLA-F-230ENST00000606273 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
HLA-F-230ENST00000606273 ERVV-2B6SEH9 535 aa16.8■□□□□ 0.28
HLA-F-230ENST00000606273 SBF1O95248 1867 aa16.8■□□□□ 0.28
HLA-F-230ENST00000606273 VEGFBP49765 207 aa16.79■□□□□ 0.28
HLA-F-230ENST00000606273 MLLT1Q03111 559 aaPredicted RBP16.79■□□□□ 0.28
HLA-F-230ENST00000606273 MTRQ99707 1265 aa16.79■□□□□ 0.28
HLA-F-230ENST00000606273 EMILIN1Q9Y6C2 1016 aa16.79■□□□□ 0.28
HLA-F-230ENST00000606273 NFKBIEO00221 500 aa16.78■□□□□ 0.28
HLA-F-230ENST00000606273 RGS19P49795 217 aa16.78■□□□□ 0.28
HLA-F-230ENST00000606273 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
HLA-F-230ENST00000606273 SLF2Q8IX21 1173 aa16.77■□□□□ 0.28
HLA-F-230ENST00000606273 TTLL6Q8N841 843 aa16.77■□□□□ 0.28
HLA-F-230ENST00000606273 IRX2Q9BZI1 471 aaPredicted RBP16.76■□□□□ 0.27
HLA-F-230ENST00000606273 PASKQ96RG2 1323 aa16.75■□□□□ 0.27
HLA-F-230ENST00000606273 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
HLA-F-230ENST00000606273 HSPA5P11021 654 aaKnown RBP16.75■□□□□ 0.27
HLA-F-230ENST00000606273 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
HLA-F-230ENST00000606273 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
HLA-F-230ENST00000606273 HSPA8P11142 646 aaKnown RBP16.74■□□□□ 0.27
HLA-F-230ENST00000606273 INTS5Q6P9B9 1019 aaKnown RBP16.74■□□□□ 0.27
HLA-F-230ENST00000606273 IL21Q9HBE4 155 aa16.74■□□□□ 0.27
HLA-F-230ENST00000606273 CCDC85CA6NKD9 419 aa16.73■□□□□ 0.27
HLA-F-230ENST00000606273 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
HLA-F-230ENST00000606273 CABP4P57796 275 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms