RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 RIPK4P57078 832 aa23.86■■□□□ 1.41
CCDC12-213ENST00000605875 SUSD4Q5VX71 490 aa23.86■■□□□ 1.41
CCDC12-213ENST00000605875 RPGRQ92834 1020 aaKnown RBP23.86■■□□□ 1.41
CCDC12-213ENST00000605875 CLEC11AQ9Y240 323 aa23.86■■□□□ 1.41
CCDC12-213ENST00000605875 UBN2Q6ZU65 1347 aa23.85■■□□□ 1.41
CCDC12-213ENST00000605875 EPHX2P34913 555 aa23.85■■□□□ 1.41
CCDC12-213ENST00000605875 CC2D2BQ6DHV5 1058 aa23.85■■□□□ 1.41
CCDC12-213ENST00000605875 JDP2Q8WYK2 163 aa23.85■■□□□ 1.41
CCDC12-213ENST00000605875 IBTKQ9P2D0 1353 aaPredicted RBP23.84■■□□□ 1.41
CCDC12-213ENST00000605875 ITGBL1O95965 494 aaPredicted RBP23.84■■□□□ 1.41
CCDC12-213ENST00000605875 TMPOP42166 694 aaKnown RBP23.84■■□□□ 1.41
CCDC12-213ENST00000605875 ZNF34Q8IZ26 560 aa23.84■■□□□ 1.41
CCDC12-213ENST00000605875 SNED1Q8TER0 1413 aa23.84■■□□□ 1.41
CCDC12-213ENST00000605875 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
CCDC12-213ENST00000605875 CNTNAP1P78357 1384 aa23.83■■□□□ 1.41
CCDC12-213ENST00000605875 HOXA10P31260 410 aaPredicted RBP23.83■■□□□ 1.41
CCDC12-213ENST00000605875 GIGYF2Q6Y7W6 1299 aaKnown RBP23.83■■□□□ 1.41
CCDC12-213ENST00000605875 PNMA8AQ86V59 439 aaPredicted RBP23.83■■□□□ 1.41
CCDC12-213ENST00000605875 GPC2Q8N158 579 aa23.83■■□□□ 1.41
CCDC12-213ENST00000605875 RBM17Q96I25 401 aaKnown RBP23.83■■□□□ 1.41
CCDC12-213ENST00000605875 TSPYL4Q9UJ04 414 aa23.83■■□□□ 1.41
CCDC12-213ENST00000605875 RIC1Q4ADV7 1423 aa23.83■■□□□ 1.4
CCDC12-213ENST00000605875 ERBB4Q15303 1308 aa23.83■■□□□ 1.4
CCDC12-213ENST00000605875 TMEM88BA6NKF7 163 aa23.82■■□□□ 1.4
CCDC12-213ENST00000605875 LMOD3Q0VAK6 560 aa23.82■■□□□ 1.4
CCDC12-213ENST00000605875 ADAMTSL1Q8N6G6 1762 aa23.81■■□□□ 1.4
CCDC12-213ENST00000605875 NTSR2O95665 410 aa23.81■■□□□ 1.4
CCDC12-213ENST00000605875 EIF6P56537 245 aaKnown RBP23.81■■□□□ 1.4
CCDC12-213ENST00000605875 GRIPAP1Q4V328 841 aa23.81■■□□□ 1.4
CCDC12-213ENST00000605875 PPP1R42Q7Z4L9 355 aa23.81■■□□□ 1.4
CCDC12-213ENST00000605875 RUNDC1Q96C34 613 aa23.81■■□□□ 1.4
CCDC12-213ENST00000605875 CRAMP1Q96RY5 1269 aa23.81■■□□□ 1.4
CCDC12-213ENST00000605875 EIF2S2P20042 333 aaKnown RBP23.8■■□□□ 1.4
CCDC12-213ENST00000605875 NEUROD2Q15784 382 aa23.8■■□□□ 1.4
CCDC12-213ENST00000605875 ADAMTS8Q9UP79 889 aa23.8■■□□□ 1.4
CCDC12-213ENST00000605875 GJA3Q9Y6H8 435 aa23.8■■□□□ 1.4
CCDC12-213ENST00000605875 TCERG1O14776 1098 aaKnown RBP23.79■■□□□ 1.4
CCDC12-213ENST00000605875 PPEF1O14829 653 aaPredicted RBP23.79■■□□□ 1.4
CCDC12-213ENST00000605875 PARP10Q53GL7 1025 aa23.79■■□□□ 1.4
CCDC12-213ENST00000605875 CNTROBQ8N137 903 aa23.79■■□□□ 1.4
CCDC12-213ENST00000605875 PDIA6Q15084 440 aa23.78■■□□□ 1.4
CCDC12-213ENST00000605875 MAP1SQ66K74 1059 aaPredicted RBP23.78■■□□□ 1.4
CCDC12-213ENST00000605875 C3orf67Q6ZVT6 689 aa23.78■■□□□ 1.4
CCDC12-213ENST00000605875 LARGE2Q8N3Y3 721 aa23.78■■□□□ 1.4
CCDC12-213ENST00000605875 COL4A5P29400 1685 aa23.78■■□□□ 1.4
CCDC12-213ENST00000605875 VEGFBP49765 207 aa23.77■■□□□ 1.4
CCDC12-213ENST00000605875 NLRP3Q96P20 1036 aa23.77■■□□□ 1.4
CCDC12-213ENST00000605875 LMOD1P29536 600 aaPredicted RBP23.76■■□□□ 1.39
CCDC12-213ENST00000605875 LRP10Q7Z4F1 713 aa23.76■■□□□ 1.39
CCDC12-213ENST00000605875 SLC51AQ86UW1 340 aa23.76■■□□□ 1.39
CCDC12-213ENST00000605875 UTP14AQ9BVJ6 771 aaKnown RBP23.76■■□□□ 1.39
CCDC12-213ENST00000605875 ZNF316A6NFI3 1004 aaPredicted RBP23.75■■□□□ 1.39
CCDC12-213ENST00000605875 FOXN1O15353 648 aa23.75■■□□□ 1.39
CCDC12-213ENST00000605875 TMX4Q9H1E5 349 aaPredicted RBP23.75■■□□□ 1.39
CCDC12-213ENST00000605875 BABAM1Q9NWV8 329 aa23.75■■□□□ 1.39
CCDC12-213ENST00000605875 ANXA1P04083 346 aa23.74■■□□□ 1.39
CCDC12-213ENST00000605875 PROSER3Q2NL68 480 aa23.74■■□□□ 1.39
CCDC12-213ENST00000605875 SLC10A5Q5PT55 438 aa23.74■■□□□ 1.39
CCDC12-213ENST00000605875 TRIM35Q9UPQ4 493 aa23.74■■□□□ 1.39
CCDC12-213ENST00000605875 NIM1KQ8IY84 436 aa23.73■■□□□ 1.39
CCDC12-213ENST00000605875 LTBP1Q14766 1721 aa23.73■■□□□ 1.39
CCDC12-213ENST00000605875 EPS15P42566 896 aa23.72■■□□□ 1.39
CCDC12-213ENST00000605875 DEFB115Q30KQ5 88 aa23.72■■□□□ 1.39
CCDC12-213ENST00000605875 AIDAQ96BJ3 306 aa23.72■■□□□ 1.39
CCDC12-213ENST00000605875 PPIP5K2O43314 1243 aa23.71■■□□□ 1.39
CCDC12-213ENST00000605875 SCNN1DP51172 638 aa23.71■■□□□ 1.39
CCDC12-213ENST00000605875 NECTIN2Q92692 538 aa23.71■■□□□ 1.39
CCDC12-213ENST00000605875 ATP6V0A2Q9Y487 856 aa23.71■■□□□ 1.39
CCDC12-213ENST00000605875 RASSF10A6NK89 507 aa23.7■■□□□ 1.38
CCDC12-213ENST00000605875 AIMP1Q12904 312 aaKnown RBP23.7■■□□□ 1.38
CCDC12-213ENST00000605875 AOC3Q16853 763 aa23.7■■□□□ 1.38
CCDC12-213ENST00000605875 HSP90AB3PQ58FF7 597 aa23.7■■□□□ 1.38
CCDC12-213ENST00000605875 COPS6Q7L5N1 327 aa23.7■■□□□ 1.38
CCDC12-213ENST00000605875 VPS33BQ9H267 617 aa23.7■■□□□ 1.38
CCDC12-213ENST00000605875 ABCC4O15439 1325 aa23.69■■□□□ 1.38
CCDC12-213ENST00000605875 CTCFP49711 727 aaPredicted RBP23.69■■□□□ 1.38
CCDC12-213ENST00000605875 XAGE3Q8WTP9 111 aa23.69■■□□□ 1.38
CCDC12-213ENST00000605875 PRDM10Q9NQV6 1147 aa23.69■■□□□ 1.38
CCDC12-213ENST00000605875 DDX21Q9NR30 783 aaKnown RBP eCLIP23.69■■□□□ 1.38
CCDC12-213ENST00000605875 ABT1Q9ULW3 272 aaKnown RBP23.69■■□□□ 1.38
CCDC12-213ENST00000605875 LAS1LQ9Y4W2 734 aaKnown RBP23.69■■□□□ 1.38
CCDC12-213ENST00000605875 ANKRD36CQ5JPF3 1778 aa23.69■■□□□ 1.38
CCDC12-213ENST00000605875 CCDC184Q52MB2 194 aa23.68■■□□□ 1.38
CCDC12-213ENST00000605875 USP50Q70EL3 339 aaPredicted RBP23.68■■□□□ 1.38
CCDC12-213ENST00000605875 SUPT20HQ8NEM7 779 aa23.68■■□□□ 1.38
CCDC12-213ENST00000605875 WBP1LQ9NX94 342 aa23.68■■□□□ 1.38
CCDC12-213ENST00000605875 BBOX1O75936 387 aa23.67■■□□□ 1.38
CCDC12-213ENST00000605875 NLRP10Q86W26 655 aa23.67■■□□□ 1.38
CCDC12-213ENST00000605875 LAMB2P55268 1798 aa23.67■■□□□ 1.38
CCDC12-213ENST00000605875 HCLS1P14317 486 aaPredicted RBP23.66■■□□□ 1.38
CCDC12-213ENST00000605875 TCIRG1Q13488 830 aa23.66■■□□□ 1.38
CCDC12-213ENST00000605875 KRT24Q2M2I5 525 aa23.66■■□□□ 1.38
CCDC12-213ENST00000605875 SP8Q8IXZ3 490 aa23.66■■□□□ 1.38
CCDC12-213ENST00000605875 RTFDC1Q9BY42 306 aaPredicted RBP23.66■■□□□ 1.38
CCDC12-213ENST00000605875 TRMT112Q9UI30 125 aaKnown RBP23.66■■□□□ 1.38
CCDC12-213ENST00000605875 WDR33Q9C0J8 1336 aaKnown RBP23.65■■□□□ 1.38
CCDC12-213ENST00000605875 CHL1O00533 1208 aa23.65■■□□□ 1.38
CCDC12-213ENST00000605875 APAF1O14727 1248 aa23.65■■□□□ 1.38
CCDC12-213ENST00000605875 FMR1Q06787 632 aaKnown RBP eCLIP23.65■■□□□ 1.38
CCDC12-213ENST00000605875 DPP8Q6V1X1 898 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms