RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 SF3B2Q13435 895 aaKnown RBP7.2□□□□□ -1.26
TUBE1-209ENST00000604814 KDF1Q8NAX2 398 aaPredicted RBP7.2□□□□□ -1.26
TUBE1-209ENST00000604814 DDX56Q9NY93 547 aaKnown RBP7.2□□□□□ -1.26
TUBE1-209ENST00000604814 SEPT3Q9UH03 358 aa7.2□□□□□ -1.26
TUBE1-209ENST00000604814 A0A1W2PRU2 124 aa7.2□□□□□ -1.26
TUBE1-209ENST00000604814 SH3BP5O60239 455 aa7.2□□□□□ -1.26
TUBE1-209ENST00000604814 LDHBP07195 334 aaKnown RBP7.2□□□□□ -1.26
TUBE1-209ENST00000604814 CTSOP43234 321 aaPredicted RBP7.2□□□□□ -1.26
TUBE1-209ENST00000604814 NFE2L2Q16236 605 aa7.2□□□□□ -1.26
TUBE1-209ENST00000604814 TMC4Q7Z404 712 aa7.2□□□□□ -1.26
TUBE1-209ENST00000604814 NLRP3Q96P20 1036 aa7.2□□□□□ -1.26
TUBE1-209ENST00000604814 RNF19AQ9NV58 838 aa7.2□□□□□ -1.26
TUBE1-209ENST00000604814 PRR12Q9ULL5 1215 aa7.2□□□□□ -1.26
TUBE1-209ENST00000604814 PRPF40AO75400 957 aaKnown RBP7.19□□□□□ -1.26
TUBE1-209ENST00000604814 PTMSP20962 102 aa7.19□□□□□ -1.26
TUBE1-209ENST00000604814 TBX4P57082 545 aa7.19□□□□□ -1.26
TUBE1-209ENST00000604814 CLDN10P78369 228 aa7.19□□□□□ -1.26
TUBE1-209ENST00000604814 EML3Q32P44 896 aa7.19□□□□□ -1.26
TUBE1-209ENST00000604814 FMNL3Q8IVF7 1028 aa7.19□□□□□ -1.26
TUBE1-209ENST00000604814 MKNK1Q9BUB5 465 aa7.19□□□□□ -1.26
TUBE1-209ENST00000604814 SPC25Q9HBM1 224 aa7.19□□□□□ -1.26
TUBE1-209ENST00000604814 ARHGEF10LQ9HCE6 1279 aa7.19□□□□□ -1.26
TUBE1-209ENST00000604814 GNRH1P01148 92 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 XRCC5P13010 732 aaKnown RBP7.18□□□□□ -1.26
TUBE1-209ENST00000604814 MAPK8P45983 427 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 FMR1Q06787 632 aaKnown RBP eCLIP7.18□□□□□ -1.26
TUBE1-209ENST00000604814 PSMD2Q13200 908 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 MCF2L2Q86YR7 1114 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 STAG1Q8WVM7 1258 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 RAB6BQ9NRW1 208 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 DNMT3LQ9UJW3 386 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 TREHO43280 583 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 PAX3P23760 479 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 DAB2P98082 770 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 FGD1P98174 961 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.18□□□□□ -1.26
TUBE1-209ENST00000604814 TMTC2Q8N394 836 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 ZNF775Q96BV0 537 aaPredicted RBP7.18□□□□□ -1.26
TUBE1-209ENST00000604814 RBCK1Q9BYM8 510 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 DNAAF2Q9NVR5 837 aaKnown RBP7.18□□□□□ -1.26
TUBE1-209ENST00000604814 NOD1Q9Y239 953 aa7.18□□□□□ -1.26
TUBE1-209ENST00000604814 LONRF3Q496Y0 759 aa7.17□□□□□ -1.26
TUBE1-209ENST00000604814 TSHZ1Q6ZSZ6 1077 aa7.17□□□□□ -1.26
TUBE1-209ENST00000604814 JDP2Q8WYK2 163 aa7.17□□□□□ -1.26
TUBE1-209ENST00000604814 K7ELQ4 463 aaPredicted RBP7.16□□□□□ -1.26
TUBE1-209ENST00000604814 ENPP3O14638 875 aa7.16□□□□□ -1.26
TUBE1-209ENST00000604814 RHBDL3P58872 404 aa7.16□□□□□ -1.26
TUBE1-209ENST00000604814 CLN3Q13286 438 aa7.16□□□□□ -1.26
TUBE1-209ENST00000604814 BIRC2Q13490 618 aa7.16□□□□□ -1.26
TUBE1-209ENST00000604814 SLC27A3Q5K4L6 730 aa7.16□□□□□ -1.26
TUBE1-209ENST00000604814 NME8Q8N427 588 aa7.16□□□□□ -1.26
TUBE1-209ENST00000604814 ATP1A2P50993 1020 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 ZNF394Q53GI3 561 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 ESCO1Q5FWF5 840 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 ZFYVE27Q5T4F4 411 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 VPS37DQ86XT2 251 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 TRIM50Q86XT4 487 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 GPATCH11Q8N954 259 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 RNF217Q8TC41 542 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 TMC1Q8TDI8 760 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 CNKSR1Q969H4 720 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 PCDHGB7Q9Y5F8 929 aa7.15□□□□□ -1.26
TUBE1-209ENST00000604814 PPP1R12AO14974 1030 aaPredicted RBP7.15□□□□□ -1.27
TUBE1-209ENST00000604814 RNF144AP50876 292 aaPredicted RBP7.15□□□□□ -1.27
TUBE1-209ENST00000604814 PRICKLE2Q7Z3G6 844 aa7.15□□□□□ -1.27
TUBE1-209ENST00000604814 RPS6KC1Q96S38 1066 aa7.15□□□□□ -1.27
TUBE1-209ENST00000604814 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.15□□□□□ -1.274e-13■■□□□ 13.6
TUBE1-209ENST00000604814 PRC1O43663 620 aa7.14□□□□□ -1.27
TUBE1-209ENST00000604814 LGR5O75473 907 aa7.14□□□□□ -1.27
TUBE1-209ENST00000604814 STAU1O95793 577 aaKnown RBP7.14□□□□□ -1.27
TUBE1-209ENST00000604814 FGRP09769 529 aa7.14□□□□□ -1.27
TUBE1-209ENST00000604814 SEC13P55735 322 aa7.14□□□□□ -1.27
TUBE1-209ENST00000604814 LYSMD3Q7Z3D4 306 aa7.14□□□□□ -1.27
TUBE1-209ENST00000604814 ZNF654Q8IZM8 581 aa7.14□□□□□ -1.27
TUBE1-209ENST00000604814 ESYT1Q9BSJ8 1104 aa7.14□□□□□ -1.27
TUBE1-209ENST00000604814 NXF1Q9UBU9 619 aaKnown RBP7.14□□□□□ -1.27
TUBE1-209ENST00000604814 PNMA2Q9UL42 364 aa7.14□□□□□ -1.27
TUBE1-209ENST00000604814 NDUFB5O43674 189 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 IL2RAP01589 272 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 GPC1P35052 558 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 GTF2IP78347 998 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 C4orf46Q504U0 113 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 CAPN12Q6ZSI9 719 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 DDX41Q9UJV9 622 aaKnown RBP7.13□□□□□ -1.27
TUBE1-209ENST00000604814 KIAA1024Q9UPX6 916 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 RBM19Q9Y4C8 960 aaKnown RBP7.13□□□□□ -1.27
TUBE1-209ENST00000604814 TERTO14746 1132 aaKnown RBP7.13□□□□□ -1.27
TUBE1-209ENST00000604814 DKK1O94907 266 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 PDGFRBP09619 1106 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 GTF2E1P29083 439 aaPredicted RBP7.13□□□□□ -1.27
TUBE1-209ENST00000604814 VEGFBP49765 207 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 GDF10P55107 478 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 RACK1P63244 317 aaKnown RBP7.13□□□□□ -1.27
TUBE1-209ENST00000604814 AMPD3Q01432 767 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 CENPCQ03188 943 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 SIX5Q8N196 739 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 XAGE2Q96GT9 111 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 ETNK1Q9HBU6 452 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 WWC3Q9ULE0 1092 aa7.13□□□□□ -1.27
TUBE1-209ENST00000604814 RHOQP17081 205 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms