RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 PDE4CQ08493 712 aa7.99□□□□□ -1.13
FOCAD-208ENST00000603648 LAMC2Q13753 1193 aa7.99□□□□□ -1.13
FOCAD-208ENST00000603648 PGBD3Q8N328 593 aa7.99□□□□□ -1.13
FOCAD-208ENST00000603648 ZDHHC1Q8WTX9 485 aa7.99□□□□□ -1.13
FOCAD-208ENST00000603648 CABP1Q9NZU7 370 aa7.99□□□□□ -1.13
FOCAD-208ENST00000603648 SPDYE3A6NKU9 549 aa7.98□□□□□ -1.13
FOCAD-208ENST00000603648 PPP1R12BO60237 982 aaPredicted RBP7.98□□□□□ -1.13
FOCAD-208ENST00000603648 CARNS1A5YM72 827 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 EML1O00423 815 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 FOXO3O43524 673 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 PRMT3O60678 531 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 H2AFB1P0C5Y9 115 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 H2AFB2P0C5Z0 115 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 NOS2P35228 1153 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 PHKA2P46019 1235 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 PLA2G4AP47712 749 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 HIRAP54198 1017 aaPredicted RBP7.97□□□□□ -1.13
FOCAD-208ENST00000603648 LBRQ14739 615 aaKnown RBP7.97□□□□□ -1.13
FOCAD-208ENST00000603648 PRIMPOLQ96LW4 560 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 C2orf49Q9BVC5 232 aaPredicted RBP7.97□□□□□ -1.13
FOCAD-208ENST00000603648 RUBCNLQ9H714 662 aa7.97□□□□□ -1.13
FOCAD-208ENST00000603648 CXXC1Q9P0U4 656 aaPredicted RBP7.97□□□□□ -1.13
FOCAD-208ENST00000603648 A0A1B0GTH6 734 aa7.96□□□□□ -1.14
FOCAD-208ENST00000603648 SERTM1A2A2V5 107 aa7.96□□□□□ -1.14
FOCAD-208ENST00000603648 ELNP15502 786 aa7.96□□□□□ -1.14
FOCAD-208ENST00000603648 EFHC2Q5JST6 749 aa7.96□□□□□ -1.14
FOCAD-208ENST00000603648 L3MBTL2Q969R5 705 aa7.96□□□□□ -1.14
FOCAD-208ENST00000603648 CHMP3Q9Y3E7 222 aa7.96□□□□□ -1.14
FOCAD-208ENST00000603648 BNIP3LO60238 219 aa7.95□□□□□ -1.14
FOCAD-208ENST00000603648 ATP2B4P23634 1241 aa7.95□□□□□ -1.14
FOCAD-208ENST00000603648 ZDHHC3Q9NYG2 299 aa7.95□□□□□ -1.14
FOCAD-208ENST00000603648 PARP3Q9Y6F1 533 aa7.95□□□□□ -1.14
FOCAD-208ENST00000603648 FAM229AH3BQW9 127 aa7.94□□□□□ -1.14
FOCAD-208ENST00000603648 SSFA2P28290 1259 aa7.94□□□□□ -1.14
FOCAD-208ENST00000603648 FKBP5Q13451 457 aaPredicted RBP7.94□□□□□ -1.14
FOCAD-208ENST00000603648 NBPF1Q3BBV0 1214 aa7.94□□□□□ -1.14
FOCAD-208ENST00000603648 SH3PXD2AQ5TCZ1 1133 aa7.94□□□□□ -1.14
FOCAD-208ENST00000603648 C1orf216Q8TAB5 229 aa7.94□□□□□ -1.14
FOCAD-208ENST00000603648 CHMP7Q8WUX9 453 aaPredicted RBP7.94□□□□□ -1.14
FOCAD-208ENST00000603648 NACC1Q96RE7 527 aa7.94□□□□□ -1.14
FOCAD-208ENST00000603648 ZNF232Q9UNY5 417 aa7.94□□□□□ -1.14
FOCAD-208ENST00000603648 ATP4AP20648 1035 aa7.93□□□□□ -1.14
FOCAD-208ENST00000603648 ADH6P28332 368 aa7.93□□□□□ -1.14
FOCAD-208ENST00000603648 MSX1P28360 303 aa7.93□□□□□ -1.14
FOCAD-208ENST00000603648 TXLNAP40222 546 aa7.93□□□□□ -1.14
FOCAD-208ENST00000603648 COL26A1Q96A83 441 aa7.93□□□□□ -1.14
FOCAD-208ENST00000603648 NDFIP2Q9NV92 336 aa7.93□□□□□ -1.14
FOCAD-208ENST00000603648 C1orf53Q5VUE5 145 aa7.92□□□□□ -1.14
FOCAD-208ENST00000603648 PHLDB3Q6NSJ2 640 aa7.92□□□□□ -1.14
FOCAD-208ENST00000603648 TRAIPQ9BWF2 469 aa7.92□□□□□ -1.14
FOCAD-208ENST00000603648 TATP17735 454 aaPredicted RBP7.91□□□□□ -1.14
FOCAD-208ENST00000603648 B4GALNT3Q6L9W6 998 aa7.91□□□□□ -1.14
FOCAD-208ENST00000603648 FCHSD1Q86WN1 690 aa7.91□□□□□ -1.14
FOCAD-208ENST00000603648 C7orf43Q8WVR3 580 aa7.91□□□□□ -1.14
FOCAD-208ENST00000603648 AIDAQ96BJ3 306 aa7.91□□□□□ -1.14
FOCAD-208ENST00000603648 CRISPLD1Q9H336 500 aa7.91□□□□□ -1.14
FOCAD-208ENST00000603648 HCN4Q9Y3Q4 1203 aa7.91□□□□□ -1.14
FOCAD-208ENST00000603648 GPC6Q9Y625 555 aaPredicted RBP7.91□□□□□ -1.14
FOCAD-208ENST00000603648 ALDH16A1Q8IZ83 802 aa7.9□□□□□ -1.14
FOCAD-208ENST00000603648 VTI1AQ96AJ9 217 aa7.9□□□□□ -1.14
FOCAD-208ENST00000603648 PHACTR1Q9C0D0 580 aa7.9□□□□□ -1.14
FOCAD-208ENST00000603648 KLF15Q9UIH9 416 aa7.9□□□□□ -1.14
FOCAD-208ENST00000603648 PTCD1O75127 700 aaKnown RBP7.89□□□□□ -1.15
FOCAD-208ENST00000603648 IRAK1P51617 712 aa7.89□□□□□ -1.15
FOCAD-208ENST00000603648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.89□□□□□ -1.15
FOCAD-208ENST00000603648 TRIM28Q13263 835 aaKnown RBP7.88□□□□□ -1.15
FOCAD-208ENST00000603648 GRIK4Q16099 956 aa7.88□□□□□ -1.15
FOCAD-208ENST00000603648 RTN1Q16799 776 aa7.88□□□□□ -1.15
FOCAD-208ENST00000603648 MYO19Q96H55 970 aa7.88□□□□□ -1.15
FOCAD-208ENST00000603648 ZIC5Q96T25 663 aa7.88□□□□□ -1.15
FOCAD-208ENST00000603648 MKNK1Q9BUB5 465 aa7.88□□□□□ -1.15
FOCAD-208ENST00000603648 QTRT2Q9H974 415 aaKnown RBP7.88□□□□□ -1.15
FOCAD-208ENST00000603648 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
FOCAD-208ENST00000603648 BRD1O95696 1058 aa7.87□□□□□ -1.15
FOCAD-208ENST00000603648 CAPN12Q6ZSI9 719 aa7.87□□□□□ -1.15
FOCAD-208ENST00000603648 HOMEZQ8IX15 550 aa7.87□□□□□ -1.15
FOCAD-208ENST00000603648 RHPN1Q8TCX5 695 aa7.87□□□□□ -1.15
FOCAD-208ENST00000603648 NGLY1Q96IV0 654 aa7.87□□□□□ -1.15
FOCAD-208ENST00000603648 A0A1W2PNR3 127 aa7.86□□□□□ -1.15
FOCAD-208ENST00000603648 PDIA4P13667 645 aaKnown RBP7.86□□□□□ -1.15
FOCAD-208ENST00000603648 ARSJQ5FYB0 599 aaPredicted RBP7.86□□□□□ -1.15
FOCAD-208ENST00000603648 NLRP8Q86W28 1048 aa7.86□□□□□ -1.15
FOCAD-208ENST00000603648 PCMTD2Q9NV79 361 aa7.86□□□□□ -1.15
FOCAD-208ENST00000603648 RNF112Q9ULX5 631 aa7.86□□□□□ -1.15
FOCAD-208ENST00000603648 SCNN1AP37088 669 aa7.85□□□□□ -1.15
FOCAD-208ENST00000603648 C16orf46Q6P387 395 aa7.85□□□□□ -1.15
FOCAD-208ENST00000603648 BICDL1Q6ZP65 573 aa7.85□□□□□ -1.15
FOCAD-208ENST00000603648 PCBP4P57723 403 aaKnown RBP7.84□□□□□ -1.15
FOCAD-208ENST00000603648 HIF1AQ16665 826 aa7.84□□□□□ -1.15
FOCAD-208ENST00000603648 COX20Q5RI15 118 aa7.84□□□□□ -1.15
FOCAD-208ENST00000603648 FIGNL1Q6PIW4 674 aa7.84□□□□□ -1.15
FOCAD-208ENST00000603648 TP53INP1Q96A56 240 aa7.84□□□□□ -1.15
FOCAD-208ENST00000603648 SAP130Q9H0E3 1048 aa7.84□□□□□ -1.15
FOCAD-208ENST00000603648 AVENQ9NQS1 362 aaPredicted RBP7.84□□□□□ -1.15
FOCAD-208ENST00000603648 SEPT3Q9UH03 358 aa7.84□□□□□ -1.15
FOCAD-208ENST00000603648 LRFN2Q9ULH4 789 aa7.84□□□□□ -1.15
FOCAD-208ENST00000603648 TAL1P17542 331 aaPredicted RBP7.83□□□□□ -1.16
FOCAD-208ENST00000603648 ARID4AP29374 1257 aaPredicted RBP7.83□□□□□ -1.16
FOCAD-208ENST00000603648 NAA30Q147X3 362 aaPredicted RBP7.83□□□□□ -1.16
FOCAD-208ENST00000603648 SAMD5Q5TGI4 173 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms