RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 NYXQ9GZU5 481 aa24.42■■□□□ 1.5
IRF3-231ENST00000602190 DDX21Q9NR30 783 aaKnown RBP eCLIP24.42■■□□□ 1.5
IRF3-231ENST00000602190 MAP3K15Q6ZN16 1313 aa24.41■■□□□ 1.5
IRF3-231ENST00000602190 UBN2Q6ZU65 1347 aa24.41■■□□□ 1.5
IRF3-231ENST00000602190 WDR33Q9C0J8 1336 aaKnown RBP24.41■■□□□ 1.5
IRF3-231ENST00000602190 U2AF1L5P0DN76 240 aaPredicted RBP24.41■■□□□ 1.5
IRF3-231ENST00000602190 U2AF1Q01081 240 aaKnown RBP eCLIP24.41■■□□□ 1.5
IRF3-231ENST00000602190 JDP2Q8WYK2 163 aa24.4■■□□□ 1.5
IRF3-231ENST00000602190 CLEC11AQ9Y240 323 aa24.4■■□□□ 1.5
IRF3-231ENST00000602190 MAP2K1Q02750 393 aaPredicted RBP24.39■■□□□ 1.49
IRF3-231ENST00000602190 NUTM1Q86Y26 1132 aa24.39■■□□□ 1.49
IRF3-231ENST00000602190 CRAMP1Q96RY5 1269 aa24.39■■□□□ 1.49
IRF3-231ENST00000602190 FAM177BA6PVY3 158 aa24.38■■□□□ 1.49
IRF3-231ENST00000602190 ZNF34Q8IZ26 560 aa24.37■■□□□ 1.49
IRF3-231ENST00000602190 NTSR2O95665 410 aa24.36■■□□□ 1.49
IRF3-231ENST00000602190 EIF6P56537 245 aaKnown RBP24.36■■□□□ 1.49
IRF3-231ENST00000602190 EIF4A1P60842 406 aaKnown RBP24.36■■□□□ 1.49
IRF3-231ENST00000602190 TTLL7Q6ZT98 887 aa24.36■■□□□ 1.49
IRF3-231ENST00000602190 LRP10Q7Z4F1 713 aa24.36■■□□□ 1.49
IRF3-231ENST00000602190 SLC51AQ86UW1 340 aa24.36■■□□□ 1.49
IRF3-231ENST00000602190 LAMB2P55268 1798 aa24.35■■□□□ 1.49
IRF3-231ENST00000602190 ANKRD36CQ5JPF3 1778 aa24.35■■□□□ 1.49
IRF3-231ENST00000602190 EPS15P42566 896 aa24.35■■□□□ 1.49
IRF3-231ENST00000602190 USP50Q70EL3 339 aaPredicted RBP24.35■■□□□ 1.49
IRF3-231ENST00000602190 PNISRQ8TF01 805 aaKnown RBP24.35■■□□□ 1.49
IRF3-231ENST00000602190 ABHD8Q96I13 439 aa24.35■■□□□ 1.49
IRF3-231ENST00000602190 MIS18AQ9NYP9 233 aa24.35■■□□□ 1.49
IRF3-231ENST00000602190 ERBB4Q15303 1308 aa24.35■■□□□ 1.49
IRF3-231ENST00000602190 GTF2E1P29083 439 aaPredicted RBP24.34■■□□□ 1.49
IRF3-231ENST00000602190 SUSD4Q5VX71 490 aa24.34■■□□□ 1.49
IRF3-231ENST00000602190 CST9Q5W186 159 aa24.34■■□□□ 1.49
IRF3-231ENST00000602190 VPS33BQ9H267 617 aa24.34■■□□□ 1.49
IRF3-231ENST00000602190 FMR1Q06787 632 aaKnown RBP eCLIP24.33■■□□□ 1.49
IRF3-231ENST00000602190 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
IRF3-231ENST00000602190 GIGYF2Q6Y7W6 1299 aaKnown RBP24.33■■□□□ 1.49
IRF3-231ENST00000602190 PLEKHF1Q96S99 279 aa24.33■■□□□ 1.49
IRF3-231ENST00000602190 LMOD1P29536 600 aaPredicted RBP24.32■■□□□ 1.48
IRF3-231ENST00000602190 C3orf67Q6ZVT6 689 aa24.32■■□□□ 1.48
IRF3-231ENST00000602190 RPGRQ92834 1020 aaKnown RBP24.32■■□□□ 1.48
IRF3-231ENST00000602190 CAPNS2Q96L46 248 aa24.32■■□□□ 1.48
IRF3-231ENST00000602190 RTFDC1Q9BY42 306 aaPredicted RBP24.32■■□□□ 1.48
IRF3-231ENST00000602190 ABT1Q9ULW3 272 aaKnown RBP24.32■■□□□ 1.48
IRF3-231ENST00000602190 TLL2Q9Y6L7 1015 aa24.32■■□□□ 1.48
IRF3-231ENST00000602190 LARGE2Q8N3Y3 721 aa24.31■■□□□ 1.48
IRF3-231ENST00000602190 GJA3Q9Y6H8 435 aa24.31■■□□□ 1.48
IRF3-231ENST00000602190 PPEF1O14829 653 aaPredicted RBP24.3■■□□□ 1.48
IRF3-231ENST00000602190 SLC34A2O95436 690 aa24.3■■□□□ 1.48
IRF3-231ENST00000602190 SLC10A5Q5PT55 438 aa24.3■■□□□ 1.48
IRF3-231ENST00000602190 RBM17Q96I25 401 aaKnown RBP24.3■■□□□ 1.48
IRF3-231ENST00000602190 PGAP2Q9UHJ9 254 aa24.3■■□□□ 1.48
IRF3-231ENST00000602190 LRRC37AA6NMS7 1700 aa24.3■■□□□ 1.48
IRF3-231ENST00000602190 ECE1P42892 770 aa24.29■■□□□ 1.48
IRF3-231ENST00000602190 RGS19P49795 217 aa24.29■■□□□ 1.48
IRF3-231ENST00000602190 KIF6Q6ZMV9 814 aa24.29■■□□□ 1.48
IRF3-231ENST00000602190 GPRC5DQ9NZD1 345 aa24.29■■□□□ 1.48
IRF3-231ENST00000602190 GPTP24298 496 aa24.28■■□□□ 1.48
IRF3-231ENST00000602190 PARP10Q53GL7 1025 aa24.28■■□□□ 1.48
IRF3-231ENST00000602190 HHIPL1Q96JK4 782 aa24.28■■□□□ 1.48
IRF3-231ENST00000602190 ATP6V0A2Q9Y487 856 aa24.28■■□□□ 1.48
IRF3-231ENST00000602190 CDHR2Q9BYE9 1310 aa24.28■■□□□ 1.48
IRF3-231ENST00000602190 TRAF5O00463 557 aa24.27■■□□□ 1.48
IRF3-231ENST00000602190 MAP2K2P36507 400 aa24.27■■□□□ 1.48
IRF3-231ENST00000602190 PDIA6Q15084 440 aa24.27■■□□□ 1.48
IRF3-231ENST00000602190 CYP4F22Q6NT55 531 aa24.27■■□□□ 1.48
IRF3-231ENST00000602190 NIM1KQ8IY84 436 aa24.27■■□□□ 1.48
IRF3-231ENST00000602190 ZBTB3Q9H5J0 574 aa24.27■■□□□ 1.48
IRF3-231ENST00000602190 ADARB2Q9NS39 739 aaKnown RBP24.27■■□□□ 1.48
IRF3-231ENST00000602190 DUOX1Q9NRD9 1551 aa24.27■■□□□ 1.48
IRF3-231ENST00000602190 NGEFQ8N5V2 710 aa24.26■■□□□ 1.47
IRF3-231ENST00000602190 GPR101Q96P66 508 aaPredicted RBP24.26■■□□□ 1.47
IRF3-231ENST00000602190 RRP7AQ9Y3A4 280 aaKnown RBP24.26■■□□□ 1.47
IRF3-231ENST00000602190 CXCL9Q07325 125 aa24.25■■□□□ 1.47
IRF3-231ENST00000602190 SAPCD2Q86UD0 394 aa24.25■■□□□ 1.47
IRF3-231ENST00000602190 PPIP5K2O43314 1243 aa24.24■■□□□ 1.47
IRF3-231ENST00000602190 MYL6BP14649 208 aa24.24■■□□□ 1.47
IRF3-231ENST00000602190 NFE2L2Q16236 605 aa24.24■■□□□ 1.47
IRF3-231ENST00000602190 AOC3Q16853 763 aa24.24■■□□□ 1.47
IRF3-231ENST00000602190 PPP1R42Q7Z4L9 355 aa24.24■■□□□ 1.47
IRF3-231ENST00000602190 ZNRF3Q9ULT6 936 aa24.24■■□□□ 1.47
IRF3-231ENST00000602190 ABCC4O15439 1325 aa24.24■■□□□ 1.47
IRF3-231ENST00000602190 NLRP3Q96P20 1036 aa24.23■■□□□ 1.47
IRF3-231ENST00000602190 FAM161AQ3B820 660 aa24.22■■□□□ 1.47
IRF3-231ENST00000602190 THUMPD2Q9BTF0 503 aaKnown RBP24.22■■□□□ 1.47
IRF3-231ENST00000602190 KIAA2012Q0VF49 1180 aa24.21■■□□□ 1.47
IRF3-231ENST00000602190 SUPT20HQ8NEM7 779 aa24.21■■□□□ 1.47
IRF3-231ENST00000602190 ZC3H15Q8WU90 426 aaKnown RBP24.21■■□□□ 1.47
IRF3-231ENST00000602190 TAF1P21675 1872 aa24.2■■□□□ 1.46
IRF3-231ENST00000602190 SP8Q8IXZ3 490 aa24.2■■□□□ 1.46
IRF3-231ENST00000602190 DDX60Q8IY21 1712 aaKnown RBP24.19■■□□□ 1.46
IRF3-231ENST00000602190 CA12O43570 354 aa24.19■■□□□ 1.46
IRF3-231ENST00000602190 BBOX1O75936 387 aa24.19■■□□□ 1.46
IRF3-231ENST00000602190 HIRAP54198 1017 aaPredicted RBP24.19■■□□□ 1.46
IRF3-231ENST00000602190 UTP14AQ9BVJ6 771 aaKnown RBP24.19■■□□□ 1.46
IRF3-231ENST00000602190 CASP8AP2Q9UKL3 1982 aa24.18■■□□□ 1.46
IRF3-231ENST00000602190 AOC2O75106 756 aa24.18■■□□□ 1.46
IRF3-231ENST00000602190 GMPSP49915 693 aaPredicted RBP24.18■■□□□ 1.46
IRF3-231ENST00000602190 BRPF1P55201 1214 aaPredicted RBP24.18■■□□□ 1.46
IRF3-231ENST00000602190 BABAM1Q9NWV8 329 aa24.18■■□□□ 1.46
IRF3-231ENST00000602190 PROSER3Q2NL68 480 aa24.17■■□□□ 1.46
IRF3-231ENST00000602190 BEGAINQ9BUH8 593 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms