RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 PCNTO95613 3336 aa23.67■■□□□ 1.38
CHMP2A-208ENST00000601220 EIF2S2P20042 333 aaKnown RBP23.66■■□□□ 1.38
CHMP2A-208ENST00000601220 COL13A1Q5TAT6 717 aaPredicted RBP23.66■■□□□ 1.38
CHMP2A-208ENST00000601220 CC2D2BQ6DHV5 1058 aa23.66■■□□□ 1.38
CHMP2A-208ENST00000601220 CRAMP1Q96RY5 1269 aa23.66■■□□□ 1.38
CHMP2A-208ENST00000601220 PASKQ96RG2 1323 aa23.65■■□□□ 1.38
CHMP2A-208ENST00000601220 ANXA1P04083 346 aa23.65■■□□□ 1.38
CHMP2A-208ENST00000601220 DDX10Q13206 875 aaKnown RBP23.65■■□□□ 1.38
CHMP2A-208ENST00000601220 SLC10A5Q5PT55 438 aa23.65■■□□□ 1.38
CHMP2A-208ENST00000601220 LDHDQ86WU2 507 aa23.65■■□□□ 1.38
CHMP2A-208ENST00000601220 CREBZFQ9NS37 354 aa23.65■■□□□ 1.38
CHMP2A-208ENST00000601220 MYBBP1AQ9BQG0 1328 aaKnown RBP23.64■■□□□ 1.38
CHMP2A-208ENST00000601220 PARP10Q53GL7 1025 aa23.64■■□□□ 1.37
CHMP2A-208ENST00000601220 RPGRQ92834 1020 aaKnown RBP23.64■■□□□ 1.37
CHMP2A-208ENST00000601220 COL4A5P29400 1685 aa23.64■■□□□ 1.37
CHMP2A-208ENST00000601220 CHL1O00533 1208 aa23.63■■□□□ 1.37
CHMP2A-208ENST00000601220 ITGBL1O95965 494 aaPredicted RBP23.63■■□□□ 1.37
CHMP2A-208ENST00000601220 LMOD3Q0VAK6 560 aa23.63■■□□□ 1.37
CHMP2A-208ENST00000601220 PPP1R42Q7Z4L9 355 aa23.63■■□□□ 1.37
CHMP2A-208ENST00000601220 RBM17Q96I25 401 aaKnown RBP23.63■■□□□ 1.37
CHMP2A-208ENST00000601220 TRIM35Q9UPQ4 493 aa23.63■■□□□ 1.37
CHMP2A-208ENST00000601220 CCDC146Q8IYE0 955 aa23.62■■□□□ 1.37
CHMP2A-208ENST00000601220 HACL1Q9UJ83 578 aa23.62■■□□□ 1.37
CHMP2A-208ENST00000601220 KRT24Q2M2I5 525 aa23.61■■□□□ 1.37
CHMP2A-208ENST00000601220 GRIPAP1Q4V328 841 aa23.61■■□□□ 1.37
CHMP2A-208ENST00000601220 GPC2Q8N158 579 aa23.61■■□□□ 1.37
CHMP2A-208ENST00000601220 UTP14AQ9BVJ6 771 aaKnown RBP23.61■■□□□ 1.37
CHMP2A-208ENST00000601220 SCN4AP35499 1836 aa23.61■■□□□ 1.37
CHMP2A-208ENST00000601220 EPHX2P34913 555 aa23.6■■□□□ 1.37
CHMP2A-208ENST00000601220 COPS6Q7L5N1 327 aa23.6■■□□□ 1.37
CHMP2A-208ENST00000601220 RNF123Q5XPI4 1314 aa23.59■■□□□ 1.37
CHMP2A-208ENST00000601220 PPEF1O14829 653 aaPredicted RBP23.59■■□□□ 1.37
CHMP2A-208ENST00000601220 NEUROD2Q15784 382 aa23.59■■□□□ 1.37
CHMP2A-208ENST00000601220 XAGE3Q8WTP9 111 aa23.59■■□□□ 1.37
CHMP2A-208ENST00000601220 JDP2Q8WYK2 163 aa23.59■■□□□ 1.37
CHMP2A-208ENST00000601220 NECTIN2Q92692 538 aa23.59■■□□□ 1.37
CHMP2A-208ENST00000601220 RUNDC1Q96C34 613 aa23.59■■□□□ 1.37
CHMP2A-208ENST00000601220 NLRP3Q96P20 1036 aa23.59■■□□□ 1.37
CHMP2A-208ENST00000601220 HSPA1AP0DMV8 641 aaKnown RBP23.58■■□□□ 1.37
CHMP2A-208ENST00000601220 HSPA1BP0DMV9 641 aaKnown RBP23.58■■□□□ 1.37
CHMP2A-208ENST00000601220 NLRP10Q86W26 655 aa23.58■■□□□ 1.37
CHMP2A-208ENST00000601220 ADAMTSL1Q8N6G6 1762 aa23.57■■□□□ 1.36
CHMP2A-208ENST00000601220 EAPPQ56P03 285 aaPredicted RBP23.57■■□□□ 1.36
CHMP2A-208ENST00000601220 DDX21Q9NR30 783 aaKnown RBP eCLIP23.57■■□□□ 1.36
CHMP2A-208ENST00000601220 MKRN1Q9UHC7 482 aaKnown RBP23.57■■□□□ 1.36
CHMP2A-208ENST00000601220 ADAMTS8Q9UP79 889 aa23.57■■□□□ 1.36
CHMP2A-208ENST00000601220 TCERG1O14776 1098 aaKnown RBP23.56■■□□□ 1.36
CHMP2A-208ENST00000601220 AIMP1Q12904 312 aaKnown RBP23.56■■□□□ 1.36
CHMP2A-208ENST00000601220 TCIRG1Q13488 830 aa23.56■■□□□ 1.36
CHMP2A-208ENST00000601220 PNMA8AQ86V59 439 aaPredicted RBP23.56■■□□□ 1.36
CHMP2A-208ENST00000601220 ATP6V0A2Q9Y487 856 aa23.56■■□□□ 1.36
CHMP2A-208ENST00000601220 HSP90AB3PQ58FF7 597 aa23.55■■□□□ 1.36
CHMP2A-208ENST00000601220 ABCC4O15439 1325 aa23.55■■□□□ 1.36
CHMP2A-208ENST00000601220 CNTNAP1P78357 1384 aa23.54■■□□□ 1.36
CHMP2A-208ENST00000601220 EIF6P56537 245 aaKnown RBP23.54■■□□□ 1.36
CHMP2A-208ENST00000601220 LARGE2Q8N3Y3 721 aa23.54■■□□□ 1.36
CHMP2A-208ENST00000601220 HCLS1P14317 486 aaPredicted RBP23.53■■□□□ 1.36
CHMP2A-208ENST00000601220 SCNN1DP51172 638 aa23.53■■□□□ 1.36
CHMP2A-208ENST00000601220 CNTROBQ8N137 903 aa23.53■■□□□ 1.36
CHMP2A-208ENST00000601220 RTFDC1Q9BY42 306 aaPredicted RBP23.53■■□□□ 1.36
CHMP2A-208ENST00000601220 CHPF2Q9P2E5 772 aa23.53■■□□□ 1.36
CHMP2A-208ENST00000601220 CLEC11AQ9Y240 323 aa23.53■■□□□ 1.36
CHMP2A-208ENST00000601220 TMEM88BA6NKF7 163 aa23.52■■□□□ 1.36
CHMP2A-208ENST00000601220 MAP1SQ66K74 1059 aaPredicted RBP23.52■■□□□ 1.36
CHMP2A-208ENST00000601220 VPS33BQ9H267 617 aa23.52■■□□□ 1.36
CHMP2A-208ENST00000601220 LAS1LQ9Y4W2 734 aaKnown RBP23.52■■□□□ 1.36
CHMP2A-208ENST00000601220 GJA3Q9Y6H8 435 aa23.52■■□□□ 1.36
CHMP2A-208ENST00000601220 LTBP1Q14766 1721 aa23.51■■□□□ 1.35
CHMP2A-208ENST00000601220 BBOX1O75936 387 aa23.51■■□□□ 1.35
CHMP2A-208ENST00000601220 HOXB7P09629 217 aa23.51■■□□□ 1.35
CHMP2A-208ENST00000601220 WDR43Q15061 677 aaKnown RBP eCLIP23.51■■□□□ 1.35
CHMP2A-208ENST00000601220 SP8Q8IXZ3 490 aa23.51■■□□□ 1.35
CHMP2A-208ENST00000601220 EPS15P42566 896 aa23.5■■□□□ 1.35
CHMP2A-208ENST00000601220 AOC3Q16853 763 aa23.5■■□□□ 1.35
CHMP2A-208ENST00000601220 CFAP44Q96MT7 982 aa23.5■■□□□ 1.35
CHMP2A-208ENST00000601220 TRMT112Q9UI30 125 aaKnown RBP23.5■■□□□ 1.35
CHMP2A-208ENST00000601220 PPIP5K2O43314 1243 aa23.49■■□□□ 1.35
CHMP2A-208ENST00000601220 PLBD2Q8NHP8 589 aa23.49■■□□□ 1.35
CHMP2A-208ENST00000601220 PRKRIP1Q9H875 184 aaPredicted RBP23.49■■□□□ 1.35
CHMP2A-208ENST00000601220 SH3TC1Q8TE82 1336 aa23.49■■□□□ 1.35
CHMP2A-208ENST00000601220 ZNF853P0CG23 659 aa23.48■■□□□ 1.35
CHMP2A-208ENST00000601220 VEGFBP49765 207 aa23.48■■□□□ 1.35
CHMP2A-208ENST00000601220 HDGFL1Q5TGJ6 251 aa23.48■■□□□ 1.35
CHMP2A-208ENST00000601220 NIM1KQ8IY84 436 aa23.48■■□□□ 1.35
CHMP2A-208ENST00000601220 ISCA1Q9BUE6 129 aa23.48■■□□□ 1.35
CHMP2A-208ENST00000601220 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
CHMP2A-208ENST00000601220 TNS4Q8IZW8 715 aa23.47■■□□□ 1.35
CHMP2A-208ENST00000601220 LMOD1P29536 600 aaPredicted RBP23.46■■□□□ 1.35
CHMP2A-208ENST00000601220 CXCL9Q07325 125 aa23.46■■□□□ 1.35
CHMP2A-208ENST00000601220 GRAPQ13588 217 aa23.46■■□□□ 1.35
CHMP2A-208ENST00000601220 DUSP27Q5VZP5 1158 aa23.46■■□□□ 1.35
CHMP2A-208ENST00000601220 GRAPLQ8TC17 118 aaPredicted RBP23.46■■□□□ 1.35
CHMP2A-208ENST00000601220 ZNF428Q96B54 188 aa23.46■■□□□ 1.35
CHMP2A-208ENST00000601220 MBIPQ9NS73 344 aa23.46■■□□□ 1.35
CHMP2A-208ENST00000601220 DBF4Q9UBU7 674 aaPredicted RBP23.46■■□□□ 1.35
CHMP2A-208ENST00000601220 ZNRF3Q9ULT6 936 aa23.46■■□□□ 1.35
CHMP2A-208ENST00000601220 ANKRD36CQ5JPF3 1778 aa23.45■■□□□ 1.34
CHMP2A-208ENST00000601220 RASSF10A6NK89 507 aa23.45■■□□□ 1.34
CHMP2A-208ENST00000601220 DDX46Q7L014 1031 aaKnown RBP23.45■■□□□ 1.34
CHMP2A-208ENST00000601220 MPNDQ8N594 471 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms