RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 ERVV-1B6SEH8 477 aa11□□□□□ -0.65
CCDC9-206ENST00000601154 SUSD4Q5VX71 490 aa11□□□□□ -0.65
CCDC9-206ENST00000601154 C3orf67Q6ZVT6 689 aa11□□□□□ -0.65
CCDC9-206ENST00000601154 GPC2Q8N158 579 aa11□□□□□ -0.65
CCDC9-206ENST00000601154 LARGE2Q8N3Y3 721 aa11□□□□□ -0.65
CCDC9-206ENST00000601154 AIDAQ96BJ3 306 aa11□□□□□ -0.65
CCDC9-206ENST00000601154 PLEKHF1Q96S99 279 aa11□□□□□ -0.65
CCDC9-206ENST00000601154 COL4A5P29400 1685 aa11□□□□□ -0.65
CCDC9-206ENST00000601154 SNED1Q8TER0 1413 aa11□□□□□ -0.65
CCDC9-206ENST00000601154 PPEF1O14829 653 aaPredicted RBP10.99□□□□□ -0.65
CCDC9-206ENST00000601154 ANXA1P04083 346 aa10.99□□□□□ -0.65
CCDC9-206ENST00000601154 EIF2S2P20042 333 aaKnown RBP10.99□□□□□ -0.65
CCDC9-206ENST00000601154 EIF6P56537 245 aaKnown RBP10.99□□□□□ -0.65
CCDC9-206ENST00000601154 PNMA8AQ86V59 439 aaPredicted RBP10.99□□□□□ -0.65
CCDC9-206ENST00000601154 CNTROBQ8N137 903 aa10.99□□□□□ -0.65
CCDC9-206ENST00000601154 PSMD1Q99460 953 aa10.99□□□□□ -0.65
CCDC9-206ENST00000601154 TSPYL4Q9UJ04 414 aa10.99□□□□□ -0.65
CCDC9-206ENST00000601154 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
CCDC9-206ENST00000601154 SCN4AP35499 1836 aa10.98□□□□□ -0.65
CCDC9-206ENST00000601154 NTSR2O95665 410 aa10.98□□□□□ -0.65
CCDC9-206ENST00000601154 LMOD1P29536 600 aaPredicted RBP10.98□□□□□ -0.65
CCDC9-206ENST00000601154 FMR1Q06787 632 aaKnown RBP eCLIP10.98□□□□□ -0.65
CCDC9-206ENST00000601154 CC2D2BQ6DHV5 1058 aa10.98□□□□□ -0.65
CCDC9-206ENST00000601154 RBM17Q96I25 401 aaKnown RBP10.98□□□□□ -0.65
CCDC9-206ENST00000601154 ABT1Q9ULW3 272 aaKnown RBP10.98□□□□□ -0.65
CCDC9-206ENST00000601154 IBTKQ9P2D0 1353 aaPredicted RBP10.98□□□□□ -0.65
CCDC9-206ENST00000601154 HOXA10P31260 410 aaPredicted RBP10.97□□□□□ -0.65
CCDC9-206ENST00000601154 EPS15P42566 896 aa10.97□□□□□ -0.65
CCDC9-206ENST00000601154 SCNN1DP51172 638 aa10.97□□□□□ -0.65
CCDC9-206ENST00000601154 GRM1Q13255 1194 aa10.97□□□□□ -0.65
CCDC9-206ENST00000601154 PROSER3Q2NL68 480 aa10.97□□□□□ -0.65
CCDC9-206ENST00000601154 GIGYF2Q6Y7W6 1299 aaKnown RBP10.97□□□□□ -0.65
CCDC9-206ENST00000601154 PAXIP1Q6ZW49 1069 aaPredicted RBP10.97□□□□□ -0.65
CCDC9-206ENST00000601154 ZNF34Q8IZ26 560 aa10.97□□□□□ -0.65
CCDC9-206ENST00000601154 NECTIN2Q92692 538 aa10.97□□□□□ -0.65
CCDC9-206ENST00000601154 RIC1Q4ADV7 1423 aa10.97□□□□□ -0.65
CCDC9-206ENST00000601154 ADAMTSL1Q8N6G6 1762 aa10.97□□□□□ -0.65
CCDC9-206ENST00000601154 PPIP5K2O43314 1243 aa10.96□□□□□ -0.65
CCDC9-206ENST00000601154 CTCFP49711 727 aaPredicted RBP10.96□□□□□ -0.65
CCDC9-206ENST00000601154 LBX1P52954 281 aa10.96□□□□□ -0.65
CCDC9-206ENST00000601154 AOC3Q16853 763 aa10.96□□□□□ -0.65
CCDC9-206ENST00000601154 DEFB115Q30KQ5 88 aa10.96□□□□□ -0.65
CCDC9-206ENST00000601154 PPP1R42Q7Z4L9 355 aa10.96□□□□□ -0.65
CCDC9-206ENST00000601154 NIM1KQ8IY84 436 aa10.96□□□□□ -0.65
CCDC9-206ENST00000601154 ZNF428Q96B54 188 aa10.96□□□□□ -0.65
CCDC9-206ENST00000601154 CRAMP1Q96RY5 1269 aa10.96□□□□□ -0.65
CCDC9-206ENST00000601154 DDX21Q9NR30 783 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCDC9-206ENST00000601154 ABCC4O15439 1325 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 ERBB4Q15303 1308 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 RASSF10A6NK89 507 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 TRAF5O00463 557 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 RIPK4P57078 832 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
CCDC9-206ENST00000601154 PARP10Q53GL7 1025 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 NLRP3Q96P20 1036 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 UTP14AQ9BVJ6 771 aaKnown RBP10.95□□□□□ -0.66
CCDC9-206ENST00000601154 TMX4Q9H1E5 349 aaPredicted RBP10.95□□□□□ -0.66
CCDC9-206ENST00000601154 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
CCDC9-206ENST00000601154 PRDM10Q9NQV6 1147 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 WBP1LQ9NX94 342 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 LTBP1Q14766 1721 aa10.95□□□□□ -0.66
CCDC9-206ENST00000601154 DLG5Q8TDM6 1919 aa10.94□□□□□ -0.66
CCDC9-206ENST00000601154 WDR33Q9C0J8 1336 aaKnown RBP10.94□□□□□ -0.66
CCDC9-206ENST00000601154 HCLS1P14317 486 aaPredicted RBP10.94□□□□□ -0.66
CCDC9-206ENST00000601154 PDIA6Q15084 440 aa10.94□□□□□ -0.66
CCDC9-206ENST00000601154 LRP10Q7Z4F1 713 aa10.94□□□□□ -0.66
CCDC9-206ENST00000601154 NUP98P52948 1817 aa10.93□□□□□ -0.66
CCDC9-206ENST00000601154 HSPA8P11142 646 aaKnown RBP10.93□□□□□ -0.66
CCDC9-206ENST00000601154 KRT24Q2M2I5 525 aa10.93□□□□□ -0.66
CCDC9-206ENST00000601154 GRIPAP1Q4V328 841 aa10.93□□□□□ -0.66
CCDC9-206ENST00000601154 CYP4F22Q6NT55 531 aa10.93□□□□□ -0.66
CCDC9-206ENST00000601154 COPS6Q7L5N1 327 aa10.93□□□□□ -0.66
CCDC9-206ENST00000601154 XAGE3Q8WTP9 111 aa10.93□□□□□ -0.66
CCDC9-206ENST00000601154 ATP6V0A2Q9Y487 856 aa10.93□□□□□ -0.66
CCDC9-206ENST00000601154 GMPSP49915 693 aaPredicted RBP10.92□□□□□ -0.66
CCDC9-206ENST00000601154 CXCL9Q07325 125 aa10.92□□□□□ -0.66
CCDC9-206ENST00000601154 NEUROD2Q15784 382 aa10.92□□□□□ -0.66
CCDC9-206ENST00000601154 DPP8Q6V1X1 898 aaPredicted RBP10.92□□□□□ -0.66
CCDC9-206ENST00000601154 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
CCDC9-206ENST00000601154 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
CCDC9-206ENST00000601154 CAPNS2Q96L46 248 aa10.92□□□□□ -0.66
CCDC9-206ENST00000601154 TRMT112Q9UI30 125 aaKnown RBP10.92□□□□□ -0.66
CCDC9-206ENST00000601154 LAS1LQ9Y4W2 734 aaKnown RBP10.92□□□□□ -0.66
CCDC9-206ENST00000601154 RAD17O75943 681 aa10.91□□□□□ -0.66
CCDC9-206ENST00000601154 TMPOP42166 694 aaKnown RBP10.91□□□□□ -0.66
CCDC9-206ENST00000601154 MAP2K1Q02750 393 aaPredicted RBP10.91□□□□□ -0.66
CCDC9-206ENST00000601154 HSP90AB3PQ58FF7 597 aa10.91□□□□□ -0.66
CCDC9-206ENST00000601154 SLC10A5Q5PT55 438 aa10.91□□□□□ -0.66
CCDC9-206ENST00000601154 NLRP10Q86W26 655 aa10.91□□□□□ -0.66
CCDC9-206ENST00000601154 SUPT20HQ8NEM7 779 aa10.91□□□□□ -0.66
CCDC9-206ENST00000601154 ZNF408Q9H9D4 720 aa10.91□□□□□ -0.66
CCDC9-206ENST00000601154 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
CCDC9-206ENST00000601154 GPRC5DQ9NZD1 345 aa10.91□□□□□ -0.66
CCDC9-206ENST00000601154 ZNRF3Q9ULT6 936 aa10.91□□□□□ -0.66
CCDC9-206ENST00000601154 LMOD3Q0VAK6 560 aa10.9□□□□□ -0.66
CCDC9-206ENST00000601154 CST9Q5W186 159 aa10.9□□□□□ -0.66
CCDC9-206ENST00000601154 CIAPIN1Q6FI81 312 aa10.9□□□□□ -0.66
CCDC9-206ENST00000601154 DDX46Q7L014 1031 aaKnown RBP10.9□□□□□ -0.66
CCDC9-206ENST00000601154 MPNDQ8N594 471 aa10.9□□□□□ -0.66
CCDC9-206ENST00000601154 BCL2L13Q9BXK5 485 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms