RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 MCM10Q7L590 875 aa13.56□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 BRIP1Q9BX63 1249 aa13.56□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 COL25A1Q9BXS0 654 aaPredicted RBP13.56□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 PPP2R1AP30153 589 aa13.55□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 EPHX2P34913 555 aa13.55□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 HACL1Q9UJ83 578 aa13.55□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 PAPPA2Q9BXP8 1791 aa13.54□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 SRGNP10124 158 aa13.54□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 CST9Q5W186 159 aa13.54□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 SLC51AQ86UW1 340 aa13.54□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 SNED1Q8TER0 1413 aa13.54□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 COL4A5P29400 1685 aa13.53□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 PNMA8AQ86V59 439 aaPredicted RBP13.53□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 LTBP3Q9NS15 1303 aa13.53□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 TTC28Q96AY4 2481 aa13.52□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 PDE6BP35913 854 aa13.52□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 C7orf43Q8WVR3 580 aa13.52□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 HLFQ16534 295 aa13.51□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 SAPCD2Q86UD0 394 aa13.51□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 SETDB2Q96T68 719 aa13.51□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 MIS18AQ9NYP9 233 aa13.51□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 U2AF1L5P0DN76 240 aaPredicted RBP13.5□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 U2AF1Q01081 240 aaKnown RBP eCLIP13.5□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 STYK1Q6J9G0 422 aa13.5□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 ZIC5Q96T25 663 aa13.5□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 SAGE1Q9NXZ1 904 aa13.5□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 ZNF541Q9H0D2 1346 aa13.49□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 KLRG2A4D1S0 409 aaPredicted RBP13.49□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 SNRPA1P09661 255 aaKnown RBP13.49□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 MASTLQ96GX5 879 aa13.49□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 HHIPL1Q96JK4 782 aa13.49□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 LAMB2P55268 1798 aa13.49□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 RNF123Q5XPI4 1314 aa13.48□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 TRAF5O00463 557 aa13.48□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 ST5P78524 1137 aa13.48□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 CFAP53Q96M91 514 aa13.48□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 PRDM6Q9NQX0 595 aa13.48□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 FAM177BA6PVY3 158 aa13.47□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 NOGQ13253 232 aa13.47□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 CLEC4GQ6UXB4 293 aa13.47□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 NBPF5PQ86XG9 351 aaPredicted RBP13.47□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 CNKSR1Q969H4 720 aa13.47□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 ANKRD36CQ5JPF3 1778 aa13.47□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 PKN2Q16513 984 aaKnown RBP13.46□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 OTUD5Q96G74 571 aa13.46□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 ZNF277Q9NRM2 450 aaPredicted RBP13.46□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 NIP7Q9Y221 180 aaKnown RBP eCLIP13.46□□□□□ -0.25
MIA-RAB4B-201ENST00000600729 UBN2Q6ZU65 1347 aa13.45□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 MUC3AQ02505 3323 aa13.45□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 TAF1P21675 1872 aa13.45□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 TTLL7Q6ZT98 887 aa13.45□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 NPR1P16066 1061 aa13.44□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 NUTM1Q86Y26 1132 aa13.44□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 RTF1Q92541 710 aaKnown RBP13.44□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 NPHP1O15259 732 aa13.43□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 EIF4A1P60842 406 aaKnown RBP13.43□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 TAF7Q15545 349 aaPredicted RBP13.43□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 C3orf67Q6ZVT6 689 aa13.43□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 LAMA2P24043 3122 aaKnown RBP13.42□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 TRPA1O75762 1119 aa13.42□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 COL9A1P20849 921 aa13.42□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 LRP10Q7Z4F1 713 aa13.42□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 NGEFQ8N5V2 710 aa13.42□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 RNF186Q9NXI6 227 aa13.42□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 ZNF652Q9Y2D9 606 aa13.42□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 COL4A1P02462 1669 aa13.42□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 POTEFA5A3E0 1075 aa13.41□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 RGL2O15211 777 aa13.41□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 CELF2O95319 508 aaKnown RBP13.41□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 TPTE2Q6XPS3 522 aa13.41□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 NPM2Q86SE8 214 aaKnown RBP13.41□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 MAP3K15Q6ZN16 1313 aa13.4□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 GPTP24298 496 aa13.4□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 EYSQ5T1H1 3165 aa13.4□□□□□ -0.26
MIA-RAB4B-201ENST00000600729 DDX60Q8IY21 1712 aaKnown RBP13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 FZD9O00144 591 aa13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 NTSR2O95665 410 aa13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 MYL6BP14649 208 aa13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 PLA2G5P39877 138 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms