RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 KLHL34Q8N239 644 aa17.55■□□□□ 0.4
VRK3-219ENST00000600137 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
VRK3-219ENST00000600137 A0A0G2JLW4 131 aa17.54■□□□□ 0.4
VRK3-219ENST00000600137 DPEP1P16444 411 aa17.54■□□□□ 0.4
VRK3-219ENST00000600137 CWF19L2Q2TBE0 894 aaKnown RBP17.54■□□□□ 0.4
VRK3-219ENST00000600137 BEND3Q5T5X7 828 aa17.54■□□□□ 0.4
VRK3-219ENST00000600137 PPP1R42Q7Z4L9 355 aa17.54■□□□□ 0.4
VRK3-219ENST00000600137 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
VRK3-219ENST00000600137 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
VRK3-219ENST00000600137 NOB1Q9ULX3 412 aaKnown RBP17.54■□□□□ 0.4
VRK3-219ENST00000600137 PTPRCP08575 1304 aa17.53■□□□□ 0.4
VRK3-219ENST00000600137 BRCA1P38398 1863 aaKnown RBP17.53■□□□□ 0.4
VRK3-219ENST00000600137 NEURL1BA8MQ27 555 aa17.53■□□□□ 0.4
VRK3-219ENST00000600137 CHRNA5P30532 468 aa17.53■□□□□ 0.4
VRK3-219ENST00000600137 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
VRK3-219ENST00000600137 GOLGB1Q14789 3259 aaKnown RBP17.53■□□□□ 0.4
VRK3-219ENST00000600137 TNRC6CQ9HCJ0 1690 aaKnown RBP17.52■□□□□ 0.4
VRK3-219ENST00000600137 C3orf67Q6ZVT6 689 aa17.52■□□□□ 0.4
VRK3-219ENST00000600137 LINS1Q8NG48 757 aa17.52■□□□□ 0.4
VRK3-219ENST00000600137 FAM89AQ96GI7 184 aa17.52■□□□□ 0.4
VRK3-219ENST00000600137 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.4
VRK3-219ENST00000600137 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
VRK3-219ENST00000600137 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
VRK3-219ENST00000600137 COL11A2P13942 1736 aaPredicted RBP17.51■□□□□ 0.39
VRK3-219ENST00000600137 ST5P78524 1137 aa17.51■□□□□ 0.39
VRK3-219ENST00000600137 DDX60Q8IY21 1712 aaKnown RBP17.5■□□□□ 0.39
VRK3-219ENST00000600137 H7C1W4 665 aa17.5■□□□□ 0.39
VRK3-219ENST00000600137 PCCAP05165 728 aaPredicted RBP17.5■□□□□ 0.39
VRK3-219ENST00000600137 SRGNP10124 158 aa17.5■□□□□ 0.39
VRK3-219ENST00000600137 CASP7P55210 303 aa17.5■□□□□ 0.39
VRK3-219ENST00000600137 GCKRQ14397 625 aa17.5■□□□□ 0.39
VRK3-219ENST00000600137 ZBTB38Q8NAP3 1195 aaPredicted RBP17.5■□□□□ 0.39
VRK3-219ENST00000600137 ARHGAP45Q92619 1136 aa17.5■□□□□ 0.39
VRK3-219ENST00000600137 JARID2Q92833 1246 aaPredicted RBP17.5■□□□□ 0.39
VRK3-219ENST00000600137 CWC25Q9NXE8 425 aaPredicted RBP17.5■□□□□ 0.39
VRK3-219ENST00000600137 TNNQ9UQP3 1299 aa17.5■□□□□ 0.39
VRK3-219ENST00000600137 DLEC1Q9Y238 1755 aa17.5■□□□□ 0.39
VRK3-219ENST00000600137 SH3TC1Q8TE82 1336 aa17.49■□□□□ 0.39
VRK3-219ENST00000600137 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
VRK3-219ENST00000600137 PDE6BP35913 854 aa17.49■□□□□ 0.39
VRK3-219ENST00000600137 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
VRK3-219ENST00000600137 CRY2Q49AN0 593 aa17.49■□□□□ 0.39
VRK3-219ENST00000600137 C2CD5Q86YS7 1000 aa17.49■□□□□ 0.39
VRK3-219ENST00000600137 LAMB2P55268 1798 aa17.48■□□□□ 0.39
VRK3-219ENST00000600137 GTF2E1P29083 439 aaPredicted RBP17.48■□□□□ 0.39
VRK3-219ENST00000600137 RTL5Q5HYW3 569 aaPredicted RBP17.48■□□□□ 0.39
VRK3-219ENST00000600137 H0YIN7 160 aa17.47■□□□□ 0.39
VRK3-219ENST00000600137 ALDH1L1O75891 902 aa17.47■□□□□ 0.39
VRK3-219ENST00000600137 YBX3P16989 372 aaKnown RBP eCLIP17.47■□□□□ 0.394e-7■■□□□ 11.9
VRK3-219ENST00000600137 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
VRK3-219ENST00000600137 UTRNP46939 3433 aa17.47■□□□□ 0.39
VRK3-219ENST00000600137 HOXA10P31260 410 aaPredicted RBP17.46■□□□□ 0.39
VRK3-219ENST00000600137 SLC4A10Q6U841 1118 aa17.46■□□□□ 0.39
VRK3-219ENST00000600137 KIF16BQ96L93 1317 aa17.46■□□□□ 0.38
VRK3-219ENST00000600137 CDHR2Q9BYE9 1310 aa17.46■□□□□ 0.38
VRK3-219ENST00000600137 IRS4O14654 1257 aaPredicted RBP17.45■□□□□ 0.38
VRK3-219ENST00000600137 NPHP1O15259 732 aa17.45■□□□□ 0.38
VRK3-219ENST00000600137 TRIM27P14373 513 aa17.45■□□□□ 0.38
VRK3-219ENST00000600137 SF3B3Q15393 1217 aaKnown RBP17.45■□□□□ 0.38
VRK3-219ENST00000600137 STYK1Q6J9G0 422 aa17.45■□□□□ 0.38
VRK3-219ENST00000600137 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
VRK3-219ENST00000600137 API5Q9BZZ5 524 aaKnown RBP17.45■□□□□ 0.38
VRK3-219ENST00000600137 SRCIN1Q9C0H9 1055 aa17.45■□□□□ 0.38
VRK3-219ENST00000600137 PIM2Q9P1W9 311 aa17.45■□□□□ 0.38
VRK3-219ENST00000600137 WWC3Q9ULE0 1092 aa17.45■□□□□ 0.38
VRK3-219ENST00000600137 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
VRK3-219ENST00000600137 NPR1P16066 1061 aa17.44■□□□□ 0.38
VRK3-219ENST00000600137 ATF7IPQ6VMQ6 1270 aa17.44■□□□□ 0.38
VRK3-219ENST00000600137 MASTLQ96GX5 879 aa17.44■□□□□ 0.38
VRK3-219ENST00000600137 RCAN3Q9UKA8 241 aa17.44■□□□□ 0.38
VRK3-219ENST00000600137 UTYO14607 1347 aa17.44■□□□□ 0.38
VRK3-219ENST00000600137 ABCC4O15439 1325 aa17.44■□□□□ 0.38
VRK3-219ENST00000600137 INTS3Q68E01 1043 aaKnown RBP17.43■□□□□ 0.38
VRK3-219ENST00000600137 UBE3BQ7Z3V4 1068 aa17.43■□□□□ 0.38
VRK3-219ENST00000600137 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
VRK3-219ENST00000600137 FRAT1Q92837 279 aaPredicted RBP17.43■□□□□ 0.38
VRK3-219ENST00000600137 PLA2G12BQ9BX93 195 aa17.43■□□□□ 0.38
VRK3-219ENST00000600137 USP44Q9H0E7 712 aa17.43■□□□□ 0.38
VRK3-219ENST00000600137 TAF1P21675 1872 aa17.43■□□□□ 0.38
VRK3-219ENST00000600137 ARFGEF1Q9Y6D6 1849 aa17.42■□□□□ 0.38
VRK3-219ENST00000600137 COL4A1P02462 1669 aa17.42■□□□□ 0.38
VRK3-219ENST00000600137 IPO8O15397 1037 aaKnown RBP17.42■□□□□ 0.38
VRK3-219ENST00000600137 ZKSCAN2Q63HK3 967 aa17.42■□□□□ 0.38
VRK3-219ENST00000600137 TTLL6Q8N841 843 aa17.42■□□□□ 0.38
VRK3-219ENST00000600137 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.38
VRK3-219ENST00000600137 KAZALD1Q96I82 304 aa17.42■□□□□ 0.38
VRK3-219ENST00000600137 GRM8O00222 908 aa17.41■□□□□ 0.38
VRK3-219ENST00000600137 PDE8AO60658 829 aa17.41■□□□□ 0.38
VRK3-219ENST00000600137 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
VRK3-219ENST00000600137 RLBP1P12271 317 aa17.41■□□□□ 0.38
VRK3-219ENST00000600137 EPHA10Q5JZY3 1008 aa17.41■□□□□ 0.38
VRK3-219ENST00000600137 CRAMP1Q96RY5 1269 aa17.41■□□□□ 0.38
VRK3-219ENST00000600137 CSF1RP07333 972 aa17.4■□□□□ 0.38
VRK3-219ENST00000600137 FOXO4P98177 505 aa17.4■□□□□ 0.38
VRK3-219ENST00000600137 DALRD3Q5D0E6 543 aaKnown RBP17.4■□□□□ 0.38
VRK3-219ENST00000600137 SLC51AQ86UW1 340 aa17.4■□□□□ 0.38
VRK3-219ENST00000600137 TTLL11Q8NHH1 800 aa17.4■□□□□ 0.38
VRK3-219ENST00000600137 BCS1LQ9Y276 419 aa17.4■□□□□ 0.38
VRK3-219ENST00000600137 CACNA1SQ13698 1873 aa17.39■□□□□ 0.38
VRK3-219ENST00000600137 MYH3P11055 1940 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms