RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 ZNF277Q9NRM2 450 aaPredicted RBP29.92■■■□□ 2.38
CCDC61-207ENST00000599044 FKBP4Q02790 459 aaKnown RBP eCLIP29.91■■■□□ 2.38
CCDC61-207ENST00000599044 APAF1O14727 1248 aa29.9■■■□□ 2.38
CCDC61-207ENST00000599044 SMC1BQ8NDV3 1235 aa29.9■■■□□ 2.38
CCDC61-207ENST00000599044 DDX21Q9NR30 783 aaKnown RBP eCLIP29.9■■■□□ 2.38
CCDC61-207ENST00000599044 RIC1Q4ADV7 1423 aa29.89■■■□□ 2.38
CCDC61-207ENST00000599044 HOXA10P31260 410 aaPredicted RBP29.89■■■□□ 2.38
CCDC61-207ENST00000599044 CCDC184Q52MB2 194 aa29.89■■■□□ 2.38
CCDC61-207ENST00000599044 CHPF2Q9P2E5 772 aa29.89■■■□□ 2.38
CCDC61-207ENST00000599044 SNED1Q8TER0 1413 aa29.88■■■□□ 2.37
CCDC61-207ENST00000599044 PARP10Q53GL7 1025 aa29.88■■■□□ 2.37
CCDC61-207ENST00000599044 PPP1R42Q7Z4L9 355 aa29.88■■■□□ 2.37
CCDC61-207ENST00000599044 RTKN2Q8IZC4 609 aa29.88■■■□□ 2.37
CCDC61-207ENST00000599044 RPGRQ92834 1020 aaKnown RBP29.88■■■□□ 2.37
CCDC61-207ENST00000599044 CFAP44Q96MT7 982 aa29.88■■■□□ 2.37
CCDC61-207ENST00000599044 SYNE4Q8N205 404 aa29.87■■■□□ 2.37
CCDC61-207ENST00000599044 MBIPQ9NS73 344 aa29.87■■■□□ 2.37
CCDC61-207ENST00000599044 UTP14AQ9BVJ6 771 aaKnown RBP29.86■■■□□ 2.37
CCDC61-207ENST00000599044 ZNF853P0CG23 659 aa29.85■■■□□ 2.37
CCDC61-207ENST00000599044 SLC10A5Q5PT55 438 aa29.85■■■□□ 2.37
CCDC61-207ENST00000599044 HDGFL1Q5TGJ6 251 aa29.85■■■□□ 2.37
CCDC61-207ENST00000599044 NLRP10Q86W26 655 aa29.85■■■□□ 2.37
CCDC61-207ENST00000599044 ZNF428Q96B54 188 aa29.85■■■□□ 2.37
CCDC61-207ENST00000599044 ZNF541Q9H0D2 1346 aa29.83■■■□□ 2.37
CCDC61-207ENST00000599044 TCERG1O14776 1098 aaKnown RBP29.83■■■□□ 2.37
CCDC61-207ENST00000599044 TCIRG1Q13488 830 aa29.83■■■□□ 2.37
CCDC61-207ENST00000599044 DUSP27Q5VZP5 1158 aa29.83■■■□□ 2.37
CCDC61-207ENST00000599044 RBM17Q96I25 401 aaKnown RBP29.83■■■□□ 2.37
CCDC61-207ENST00000599044 CRAMP1Q96RY5 1269 aa29.83■■■□□ 2.37
CCDC61-207ENST00000599044 POTEIP0CG38 1075 aa29.82■■■□□ 2.36
CCDC61-207ENST00000599044 POTEJP0CG39 1038 aa29.82■■■□□ 2.36
CCDC61-207ENST00000599044 IARSP41252 1262 aaKnown RBP29.82■■■□□ 2.36
CCDC61-207ENST00000599044 KLRG1Q96E93 195 aa29.82■■■□□ 2.36
CCDC61-207ENST00000599044 NLRP3Q96P20 1036 aa29.82■■■□□ 2.36
CCDC61-207ENST00000599044 HOXB7P09629 217 aa29.81■■■□□ 2.36
CCDC61-207ENST00000599044 HCLS1P14317 486 aaPredicted RBP29.8■■■□□ 2.36
CCDC61-207ENST00000599044 HSP90AB3PQ58FF7 597 aa29.8■■■□□ 2.36
CCDC61-207ENST00000599044 PSMD1Q99460 953 aa29.8■■■□□ 2.36
CCDC61-207ENST00000599044 PCNTO95613 3336 aa29.8■■■□□ 2.36
CCDC61-207ENST00000599044 PPEF1O14829 653 aaPredicted RBP29.79■■■□□ 2.36
CCDC61-207ENST00000599044 DBF4Q9UBU7 674 aaPredicted RBP29.79■■■□□ 2.36
CCDC61-207ENST00000599044 COL4A5P29400 1685 aa29.79■■■□□ 2.36
CCDC61-207ENST00000599044 JMYQ8N9B5 988 aa29.78■■■□□ 2.36
CCDC61-207ENST00000599044 SCN4AP35499 1836 aa29.78■■■□□ 2.36
CCDC61-207ENST00000599044 ANKRD36CQ5JPF3 1778 aa29.77■■■□□ 2.36
CCDC61-207ENST00000599044 FZD9O00144 591 aa29.77■■■□□ 2.36
CCDC61-207ENST00000599044 ELL2O00472 640 aaPredicted RBP29.77■■■□□ 2.36
CCDC61-207ENST00000599044 CC2D2BQ6DHV5 1058 aa29.77■■■□□ 2.36
CCDC61-207ENST00000599044 ANKRD13DQ6ZTN6 518 aa29.77■■■□□ 2.36
CCDC61-207ENST00000599044 PLBD2Q8NHP8 589 aa29.77■■■□□ 2.36
CCDC61-207ENST00000599044 L3MBTL3Q96JM7 780 aaPredicted RBP29.77■■■□□ 2.36
CCDC61-207ENST00000599044 IFT57Q9NWB7 429 aa29.77■■■□□ 2.36
CCDC61-207ENST00000599044 TRMT112Q9UI30 125 aaKnown RBP29.77■■■□□ 2.36
CCDC61-207ENST00000599044 ABCC4O15439 1325 aa29.75■■■□□ 2.35
CCDC61-207ENST00000599044 RNF123Q5XPI4 1314 aa29.74■■■□□ 2.35
CCDC61-207ENST00000599044 ATP5J2-PTCD1G3V325 749 aa29.74■■■□□ 2.35
CCDC61-207ENST00000599044 GNAI1P63096 354 aa29.74■■■□□ 2.35
CCDC61-207ENST00000599044 C8orf58Q8NAV2 365 aa29.74■■■□□ 2.35
CCDC61-207ENST00000599044 ISCA1Q9BUE6 129 aa29.73■■■□□ 2.35
CCDC61-207ENST00000599044 TAF1DQ9H5J8 278 aaPredicted RBP29.73■■■□□ 2.35
CCDC61-207ENST00000599044 HYPKQ9NX55 129 aa29.73■■■□□ 2.35
CCDC61-207ENST00000599044 SH3TC1Q8TE82 1336 aa29.72■■■□□ 2.35
CCDC61-207ENST00000599044 ZNF316A6NFI3 1004 aaPredicted RBP29.72■■■□□ 2.35
CCDC61-207ENST00000599044 CHADLQ6NUI6 762 aa29.72■■■□□ 2.35
CCDC61-207ENST00000599044 PHAXQ9H814 394 aaKnown RBP29.72■■■□□ 2.35
CCDC61-207ENST00000599044 ATP6V0A2Q9Y487 856 aa29.72■■■□□ 2.35
CCDC61-207ENST00000599044 LAMB2P55268 1798 aa29.71■■■□□ 2.35
CCDC61-207ENST00000599044 IQCA1LA6NCM1 817 aa29.7■■■□□ 2.35
CCDC61-207ENST00000599044 CALD1Q05682 793 aaKnown RBP29.7■■■□□ 2.35
CCDC61-207ENST00000599044 JDP2Q8WYK2 163 aa29.7■■■□□ 2.35
CCDC61-207ENST00000599044 GRIPAP1Q4V328 841 aa29.69■■■□□ 2.34
CCDC61-207ENST00000599044 FAM89AQ96GI7 184 aa29.69■■■□□ 2.34
CCDC61-207ENST00000599044 LARGE2Q8N3Y3 721 aa29.68■■■□□ 2.34
CCDC61-207ENST00000599044 RTL5Q5HYW3 569 aaPredicted RBP29.67■■■□□ 2.34
CCDC61-207ENST00000599044 GPC2Q8N158 579 aa29.67■■■□□ 2.34
CCDC61-207ENST00000599044 TSPYL6Q8N831 410 aa29.67■■■□□ 2.34
CCDC61-207ENST00000599044 HACL1Q9UJ83 578 aa29.67■■■□□ 2.34
CCDC61-207ENST00000599044 BBOX1O75936 387 aa29.66■■■□□ 2.34
CCDC61-207ENST00000599044 GJA3Q9Y6H8 435 aa29.66■■■□□ 2.34
CCDC61-207ENST00000599044 EPHX2P34913 555 aa29.65■■■□□ 2.34
CCDC61-207ENST00000599044 AOC3Q16853 763 aa29.65■■■□□ 2.34
CCDC61-207ENST00000599044 EAPPQ56P03 285 aaPredicted RBP29.65■■■□□ 2.34
CCDC61-207ENST00000599044 DDX46Q7L014 1031 aaKnown RBP29.65■■■□□ 2.34
CCDC61-207ENST00000599044 LDHDQ86WU2 507 aa29.65■■■□□ 2.34
CCDC61-207ENST00000599044 SP8Q8IXZ3 490 aa29.65■■■□□ 2.34
CCDC61-207ENST00000599044 TSR2Q969E8 191 aaKnown RBP29.65■■■□□ 2.34
CCDC61-207ENST00000599044 GRAPQ13588 217 aa29.64■■■□□ 2.34
CCDC61-207ENST00000599044 RIC3Q7Z5B4 369 aa29.64■■■□□ 2.34
CCDC61-207ENST00000599044 GRAPLQ8TC17 118 aaPredicted RBP29.64■■■□□ 2.34
CCDC61-207ENST00000599044 DDX60Q8IY21 1712 aaKnown RBP29.63■■■□□ 2.33
CCDC61-207ENST00000599044 ADAMTSL1Q8N6G6 1762 aa29.63■■■□□ 2.33
CCDC61-207ENST00000599044 PPIP5K2O43314 1243 aa29.63■■■□□ 2.33
CCDC61-207ENST00000599044 EIF6P56537 245 aaKnown RBP29.63■■■□□ 2.33
CCDC61-207ENST00000599044 TRIM28Q13263 835 aaKnown RBP29.63■■■□□ 2.33
CCDC61-207ENST00000599044 TAF1P21675 1872 aa29.63■■■□□ 2.33
CCDC61-207ENST00000599044 WWC1Q8IX03 1113 aa29.62■■■□□ 2.33
CCDC61-207ENST00000599044 RTFDC1Q9BY42 306 aaPredicted RBP29.62■■■□□ 2.33
CCDC61-207ENST00000599044 TMX4Q9H1E5 349 aaPredicted RBP29.62■■■□□ 2.33
CCDC61-207ENST00000599044 COL4A1P02462 1669 aa29.61■■■□□ 2.33
CCDC61-207ENST00000599044 GOLGA2Q08379 1002 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms