RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 RTKN2Q8IZC4 609 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 IFNL2Q8IZJ0 200 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 LARGE2Q8N3Y3 721 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 SLC39A7Q92504 469 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 MASTLQ96GX5 879 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 PHF12Q96QT6 1004 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.28□□□□□ -1.4
HERC3-213ENST00000598772 NARFQ9UHQ1 456 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 RANBP2P49792 3224 aaKnown RBP6.28□□□□□ -1.4
HERC3-213ENST00000598772 WTIPA6NIX2 430 aaPredicted RBP6.27□□□□□ -1.41
HERC3-213ENST00000598772 MKRN3Q13064 507 aaKnown RBP6.27□□□□□ -1.41
HERC3-213ENST00000598772 HSP90AB2PQ58FF8 381 aa6.27□□□□□ -1.41
HERC3-213ENST00000598772 ASTLQ6HA08 431 aaPredicted RBP6.27□□□□□ -1.41
HERC3-213ENST00000598772 BCL2L13Q9BXK5 485 aa6.27□□□□□ -1.41
HERC3-213ENST00000598772 STXBP5LQ9Y2K9 1186 aa6.27□□□□□ -1.41
HERC3-213ENST00000598772 ZNF330Q9Y3S2 320 aaPredicted RBP6.27□□□□□ -1.41
HERC3-213ENST00000598772 SLX4Q8IY92 1834 aa6.27□□□□□ -1.41
HERC3-213ENST00000598772 MYH14Q7Z406 1995 aaKnown RBP6.26□□□□□ -1.41
HERC3-213ENST00000598772 BRCA2P51587 3418 aa6.26□□□□□ -1.41
HERC3-213ENST00000598772 CACNA1AO00555 2505 aa6.26□□□□□ -1.41
HERC3-213ENST00000598772 TCERG1O14776 1098 aaKnown RBP6.26□□□□□ -1.41
HERC3-213ENST00000598772 PPM1GO15355 546 aaPredicted RBP6.26□□□□□ -1.41
HERC3-213ENST00000598772 ATMINO43313 823 aaPredicted RBP6.26□□□□□ -1.41
HERC3-213ENST00000598772 SRGNP10124 158 aa6.26□□□□□ -1.41
HERC3-213ENST00000598772 PHKG2P15735 406 aa6.26□□□□□ -1.41
HERC3-213ENST00000598772 CANXP27824 592 aaKnown RBP6.26□□□□□ -1.41
HERC3-213ENST00000598772 ST5P78524 1137 aa6.26□□□□□ -1.41
HERC3-213ENST00000598772 TBC1D9BQ66K14 1250 aa6.26□□□□□ -1.41
HERC3-213ENST00000598772 PRR5LQ6MZQ0 368 aa6.26□□□□□ -1.41
HERC3-213ENST00000598772 DNAJC10Q8IXB1 793 aa6.26□□□□□ -1.41
HERC3-213ENST00000598772 SLC12A5Q9H2X9 1139 aa6.26□□□□□ -1.41
HERC3-213ENST00000598772 AFDNP55196 1824 aaKnown RBP6.26□□□□□ -1.41
HERC3-213ENST00000598772 FAM208AQ9UK61 1670 aaKnown RBP6.26□□□□□ -1.41
HERC3-213ENST00000598772 ECM2O94769 699 aaPredicted RBP6.25□□□□□ -1.41
HERC3-213ENST00000598772 SLC10A3P09131 477 aa6.25□□□□□ -1.41
HERC3-213ENST00000598772 GMPSP49915 693 aaPredicted RBP6.25□□□□□ -1.41
HERC3-213ENST00000598772 RBM26Q5T8P6 1007 aaKnown RBP6.25□□□□□ -1.41
HERC3-213ENST00000598772 KRT26Q7Z3Y9 468 aa6.25□□□□□ -1.41
HERC3-213ENST00000598772 NIM1KQ8IY84 436 aa6.25□□□□□ -1.41
HERC3-213ENST00000598772 CNBD1Q8NA66 436 aa6.25□□□□□ -1.41
HERC3-213ENST00000598772 SNX27Q96L92 541 aa6.25□□□□□ -1.41
HERC3-213ENST00000598772 STAC3Q96MF2 364 aa6.25□□□□□ -1.41
HERC3-213ENST00000598772 BCL2L12Q9HB09 334 aa6.25□□□□□ -1.41
HERC3-213ENST00000598772 GPRC5DQ9NZD1 345 aa6.25□□□□□ -1.41
HERC3-213ENST00000598772 KDRP35968 1356 aa6.25□□□□□ -1.41
HERC3-213ENST00000598772 CACNA1SQ13698 1873 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 PAPPA2Q9BXP8 1791 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 SCN11AQ9UI33 1791 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 ERVV-2B6SEH9 535 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 ADM5C9JUS6 153 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 HIRAP54198 1017 aaPredicted RBP6.24□□□□□ -1.41
HERC3-213ENST00000598772 OTOP1Q7RTM1 612 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 TRPM4Q8TD43 1214 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 C7orf43Q8WVR3 580 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 SETDB2Q96T68 719 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 R3HDMLQ9H3Y0 253 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 TERF2IPQ9NYB0 399 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 STAP2Q9UGK3 403 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 NR2E3Q9Y5X4 410 aa6.24□□□□□ -1.41
HERC3-213ENST00000598772 SOS1Q07889 1333 aaPredicted RBP6.24□□□□□ -1.41
HERC3-213ENST00000598772 DLEC1Q9Y238 1755 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 CENPFP49454 3210 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 INSRP06213 1382 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 SBNO2Q9Y2G9 1366 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 FAM177BA6PVY3 158 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 H7C1D1 291 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 NPR1P16066 1061 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 NFATC2IPQ8NCF5 419 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 ZC3H15Q8WU90 426 aaKnown RBP6.23□□□□□ -1.41
HERC3-213ENST00000598772 MTMR10Q9NXD2 777 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 TBC1D2BQ9UPU7 963 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 VCANP13611 3396 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 ERBB4Q15303 1308 aa6.23□□□□□ -1.41
HERC3-213ENST00000598772 COL15A1P39059 1388 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 SHTN1A0MZ66 631 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 RAD17O75943 681 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 MAP3K12Q12852 859 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 TTLL12Q14166 644 aaPredicted RBP6.22□□□□□ -1.41
HERC3-213ENST00000598772 NPM2Q86SE8 214 aaKnown RBP6.22□□□□□ -1.41
HERC3-213ENST00000598772 NBPF11Q86T75 865 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 RASAL3Q86YV0 1011 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 DCPSQ96C86 337 aaKnown RBP6.22□□□□□ -1.41
HERC3-213ENST00000598772 FAM161BQ96MY7 647 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 CNOT7Q9UIV1 285 aaKnown RBP6.22□□□□□ -1.41
HERC3-213ENST00000598772 PTPN22Q9Y2R2 807 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 TTC28Q96AY4 2481 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 MON2Q7Z3U7 1717 aa6.22□□□□□ -1.41
HERC3-213ENST00000598772 ST20-MTHFSA0A0A6YYL1 179 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 UBE2Q2LH0YL09 131 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 PPIP5K2O43314 1243 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 MTHFSP49914 203 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 CXCL9Q07325 125 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 SLC9C1Q4G0N8 1177 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 TBC1D10BQ4KMP7 808 aaPredicted RBP6.21□□□□□ -1.42
HERC3-213ENST00000598772 SAMD7Q7Z3H4 446 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 NBPF5PQ86XG9 351 aaPredicted RBP6.21□□□□□ -1.42
HERC3-213ENST00000598772 CD99L2Q8TCZ2 262 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 EFCC1Q9HA90 598 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 PGAP2Q9UHJ9 254 aa6.21□□□□□ -1.42
HERC3-213ENST00000598772 ZBTB1Q9Y2K1 713 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms