RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 ATP7BP35670 1465 aa11.32□□□□□ -0.6
LINC00343-204ENST00000596398 DHX57Q6P158 1386 aaKnown RBP11.32□□□□□ -0.6
LINC00343-204ENST00000596398 ANKRD30BQ9BXX2 1392 aa11.32□□□□□ -0.6
LINC00343-204ENST00000596398 TERTO14746 1132 aaKnown RBP11.32□□□□□ -0.6
LINC00343-204ENST00000596398 PARP9Q8IXQ6 854 aa11.32□□□□□ -0.6
LINC00343-204ENST00000596398 ATP10DQ9P241 1426 aa11.32□□□□□ -0.6
LINC00343-204ENST00000596398 GJA5P36382 358 aa11.31□□□□□ -0.6
LINC00343-204ENST00000596398 CFAP70Q5T0N1 1121 aa11.31□□□□□ -0.6
LINC00343-204ENST00000596398 RSBN1LQ6PCB5 846 aaPredicted RBP11.31□□□□□ -0.6
LINC00343-204ENST00000596398 NLGN2Q8NFZ4 835 aa11.31□□□□□ -0.6
LINC00343-204ENST00000596398 SPATA31E1Q6ZUB1 1445 aa11.31□□□□□ -0.6
LINC00343-204ENST00000596398 CAPN5O15484 640 aaPredicted RBP11.3□□□□□ -0.6
LINC00343-204ENST00000596398 BMP1P13497 986 aa11.3□□□□□ -0.6
LINC00343-204ENST00000596398 DIXDC1Q155Q3 683 aa11.3□□□□□ -0.6
LINC00343-204ENST00000596398 DDB1Q16531 1140 aa11.3□□□□□ -0.6
LINC00343-204ENST00000596398 MARCH10Q8NA82 808 aaPredicted RBP11.3□□□□□ -0.6
LINC00343-204ENST00000596398 ZNF511Q8NB15 262 aa11.3□□□□□ -0.6
LINC00343-204ENST00000596398 ZNF526Q8TF50 670 aaPredicted RBP11.3□□□□□ -0.6
LINC00343-204ENST00000596398 C14orf93Q9H972 538 aaKnown RBP11.3□□□□□ -0.6
LINC00343-204ENST00000596398 TULP4Q9NRJ4 1543 aa11.3□□□□□ -0.6
LINC00343-204ENST00000596398 WIPF1O43516 503 aa11.29□□□□□ -0.6
LINC00343-204ENST00000596398 YBX3P16989 372 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00343-204ENST00000596398 LCE2CQ5TA81 110 aa11.29□□□□□ -0.6
LINC00343-204ENST00000596398 TRIM46Q7Z4K8 759 aa11.29□□□□□ -0.6
LINC00343-204ENST00000596398 TLL2Q9Y6L7 1015 aa11.29□□□□□ -0.6
LINC00343-204ENST00000596398 COL5A2P05997 1499 aaPredicted RBP11.29□□□□□ -0.6
LINC00343-204ENST00000596398 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
LINC00343-204ENST00000596398 TRIM66O15016 1216 aa11.28□□□□□ -0.6
LINC00343-204ENST00000596398 GPBP1L1Q9HC44 474 aaPredicted RBP11.28□□□□□ -0.6
LINC00343-204ENST00000596398 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
LINC00343-204ENST00000596398 CRB1P82279 1406 aa11.27□□□□□ -0.6
LINC00343-204ENST00000596398 WASLO00401 505 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-204ENST00000596398 SPTLC1O15269 473 aa11.27□□□□□ -0.61
LINC00343-204ENST00000596398 COL13A1Q5TAT6 717 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-204ENST00000596398 LYPD8Q6UX82 237 aa11.27□□□□□ -0.61
LINC00343-204ENST00000596398 CPDO75976 1380 aa11.27□□□□□ -0.61
LINC00343-204ENST00000596398 ZBTB7CA1YPR0 619 aa11.26□□□□□ -0.61
LINC00343-204ENST00000596398 CFAP99D6REC4 459 aa11.26□□□□□ -0.61
LINC00343-204ENST00000596398 VARSP26640 1264 aaKnown RBP11.26□□□□□ -0.61
LINC00343-204ENST00000596398 CTHP32929 405 aa11.26□□□□□ -0.61
LINC00343-204ENST00000596398 ZNF827Q17R98 1081 aa11.26□□□□□ -0.61
LINC00343-204ENST00000596398 PAPPAQ13219 1627 aa11.26□□□□□ -0.61
LINC00343-204ENST00000596398 TOPAZ1Q8N9V7 1692 aa11.26□□□□□ -0.61
LINC00343-204ENST00000596398 WNK3Q9BYP7 1800 aa11.25□□□□□ -0.61
LINC00343-204ENST00000596398 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
LINC00343-204ENST00000596398 AK7Q96M32 723 aa11.25□□□□□ -0.61
LINC00343-204ENST00000596398 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
LINC00343-204ENST00000596398 EIF3AQ14152 1382 aaKnown RBP11.25□□□□□ -0.61
LINC00343-204ENST00000596398 ITSN1Q15811 1721 aa11.24□□□□□ -0.61
LINC00343-204ENST00000596398 MPNDQ8N594 471 aa11.24□□□□□ -0.61
LINC00343-204ENST00000596398 DNAJC5GQ8N7S2 189 aa11.24□□□□□ -0.61
LINC00343-204ENST00000596398 ABTB2Q8N961 1025 aa11.24□□□□□ -0.61
LINC00343-204ENST00000596398 ZBTB3Q9H5J0 574 aa11.24□□□□□ -0.61
LINC00343-204ENST00000596398 AATKQ6ZMQ8 1374 aa11.24□□□□□ -0.61
LINC00343-204ENST00000596398 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
LINC00343-204ENST00000596398 GCP02774 474 aa11.23□□□□□ -0.61
LINC00343-204ENST00000596398 INSM1Q01101 510 aaPredicted RBP11.23□□□□□ -0.61
LINC00343-204ENST00000596398 NNTQ13423 1086 aa11.23□□□□□ -0.61
LINC00343-204ENST00000596398 TOM1L2Q6ZVM7 507 aa11.23□□□□□ -0.61
LINC00343-204ENST00000596398 RIC3Q7Z5B4 369 aa11.23□□□□□ -0.61
LINC00343-204ENST00000596398 PPARGC1BQ86YN6 1023 aaKnown RBP11.23□□□□□ -0.61
LINC00343-204ENST00000596398 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
LINC00343-204ENST00000596398 STK17AQ9UEE5 414 aa11.23□□□□□ -0.61
LINC00343-204ENST00000596398 BCL9O00512 1426 aa11.23□□□□□ -0.61
LINC00343-204ENST00000596398 COL24A1Q17RW2 1714 aa11.23□□□□□ -0.61
LINC00343-204ENST00000596398 USP19O94966 1318 aa11.22□□□□□ -0.61
LINC00343-204ENST00000596398 POLD1P28340 1107 aa11.22□□□□□ -0.61
LINC00343-204ENST00000596398 ADCY9O60503 1353 aa11.21□□□□□ -0.61
LINC00343-204ENST00000596398 ACEP12821 1306 aa11.21□□□□□ -0.61
LINC00343-204ENST00000596398 PRPF38BQ5VTL8 546 aaKnown RBP11.21□□□□□ -0.61
LINC00343-204ENST00000596398 ACSBG1Q96GR2 724 aa11.21□□□□□ -0.61
LINC00343-204ENST00000596398 LRRC4BQ9NT99 713 aa11.21□□□□□ -0.61
LINC00343-204ENST00000596398 MAP10Q9P2G4 905 aa11.21□□□□□ -0.61
LINC00343-204ENST00000596398 NHSQ6T4R5 1651 aa11.2□□□□□ -0.62
LINC00343-204ENST00000596398 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
LINC00343-204ENST00000596398 F12P00748 615 aaPredicted RBP11.2□□□□□ -0.62
LINC00343-204ENST00000596398 PRELPP51888 382 aa11.2□□□□□ -0.62
LINC00343-204ENST00000596398 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
LINC00343-204ENST00000596398 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
LINC00343-204ENST00000596398 NXF1Q9UBU9 619 aaKnown RBP11.2□□□□□ -0.62
LINC00343-204ENST00000596398 POLR3AO14802 1390 aaPredicted RBP11.19□□□□□ -0.62
LINC00343-204ENST00000596398 TUBGCP6Q96RT7 1819 aa11.19□□□□□ -0.62
LINC00343-204ENST00000596398 CSPP1Q1MSJ5 1256 aa11.19□□□□□ -0.62
LINC00343-204ENST00000596398 TNS4Q8IZW8 715 aa11.19□□□□□ -0.62
LINC00343-204ENST00000596398 FOXJ1Q92949 421 aa11.19□□□□□ -0.62
LINC00343-204ENST00000596398 BTAF1O14981 1849 aa11.19□□□□□ -0.62
LINC00343-204ENST00000596398 PNPLA7Q6ZV29 1317 aa11.18□□□□□ -0.62
LINC00343-204ENST00000596398 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
LINC00343-204ENST00000596398 COL18A1P39060 1754 aa11.18□□□□□ -0.62
LINC00343-204ENST00000596398 RGPD5Q99666 1765 aa11.18□□□□□ -0.62
LINC00343-204ENST00000596398 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
LINC00343-204ENST00000596398 EXOC5O00471 708 aa11.17□□□□□ -0.62
LINC00343-204ENST00000596398 ADH1CP00326 375 aa11.17□□□□□ -0.62
LINC00343-204ENST00000596398 TIMP2P16035 220 aa11.17□□□□□ -0.62
LINC00343-204ENST00000596398 WDR4P57081 412 aaKnown RBP11.17□□□□□ -0.62
LINC00343-204ENST00000596398 NLRP13Q86W25 1043 aa11.17□□□□□ -0.62
LINC00343-204ENST00000596398 KAT6BQ8WYB5 2073 aa11.16□□□□□ -0.62
LINC00343-204ENST00000596398 WDR17Q8IZU2 1322 aa11.16□□□□□ -0.62
LINC00343-204ENST00000596398 KCNQ4P56696 695 aa11.16□□□□□ -0.62
LINC00343-204ENST00000596398 HTRA3P83110 453 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms