RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 RUNDC1Q96C34 613 aa20.92■□□□□ 0.94
USHBP1-205ENST00000595993 HACL1Q9UJ83 578 aa20.92■□□□□ 0.94
USHBP1-205ENST00000595993 UBN2Q6ZU65 1347 aa20.92■□□□□ 0.94
USHBP1-205ENST00000595993 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
USHBP1-205ENST00000595993 CC2D2BQ6DHV5 1058 aa20.91■□□□□ 0.94
USHBP1-205ENST00000595993 TTLL7Q6ZT98 887 aa20.91■□□□□ 0.94
USHBP1-205ENST00000595993 GPC2Q8N158 579 aa20.91■□□□□ 0.94
USHBP1-205ENST00000595993 RRP7AQ9Y3A4 280 aaKnown RBP20.91■□□□□ 0.94
USHBP1-205ENST00000595993 ERBB4Q15303 1308 aa20.9■□□□□ 0.94
USHBP1-205ENST00000595993 NUTM1Q86Y26 1132 aa20.9■□□□□ 0.94
USHBP1-205ENST00000595993 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
USHBP1-205ENST00000595993 LTBP1Q14766 1721 aa20.9■□□□□ 0.94
USHBP1-205ENST00000595993 GTF2E1P29083 439 aaPredicted RBP20.89■□□□□ 0.93
USHBP1-205ENST00000595993 EPHX2P34913 555 aa20.89■□□□□ 0.93
USHBP1-205ENST00000595993 PNMA8AQ86V59 439 aaPredicted RBP20.89■□□□□ 0.93
USHBP1-205ENST00000595993 ZNF34Q8IZ26 560 aa20.89■□□□□ 0.93
USHBP1-205ENST00000595993 RNF123Q5XPI4 1314 aa20.88■□□□□ 0.93
USHBP1-205ENST00000595993 TMEM88BA6NKF7 163 aa20.88■□□□□ 0.93
USHBP1-205ENST00000595993 RIPK4P57078 832 aa20.88■□□□□ 0.93
USHBP1-205ENST00000595993 KIF6Q6ZMV9 814 aa20.88■□□□□ 0.93
USHBP1-205ENST00000595993 LRP10Q7Z4F1 713 aa20.88■□□□□ 0.93
USHBP1-205ENST00000595993 NTSR2O95665 410 aa20.87■□□□□ 0.93
USHBP1-205ENST00000595993 GRIPAP1Q4V328 841 aa20.87■□□□□ 0.93
USHBP1-205ENST00000595993 SUSD4Q5VX71 490 aa20.87■□□□□ 0.93
USHBP1-205ENST00000595993 NGEFQ8N5V2 710 aa20.87■□□□□ 0.93
USHBP1-205ENST00000595993 EAPPQ56P03 285 aaPredicted RBP20.86■□□□□ 0.93
USHBP1-205ENST00000595993 GIGYF2Q6Y7W6 1299 aaKnown RBP20.86■□□□□ 0.93
USHBP1-205ENST00000595993 CRAMP1Q96RY5 1269 aa20.86■□□□□ 0.93
USHBP1-205ENST00000595993 FOXN1O15353 648 aa20.85■□□□□ 0.93
USHBP1-205ENST00000595993 CAPN15O75808 1086 aa20.85■□□□□ 0.93
USHBP1-205ENST00000595993 MYL6BP14649 208 aa20.85■□□□□ 0.93
USHBP1-205ENST00000595993 GPTP24298 496 aa20.85■□□□□ 0.93
USHBP1-205ENST00000595993 VEGFBP49765 207 aa20.85■□□□□ 0.93
USHBP1-205ENST00000595993 NEUROD2Q15784 382 aa20.85■□□□□ 0.93
USHBP1-205ENST00000595993 JDP2Q8WYK2 163 aa20.85■□□□□ 0.93
USHBP1-205ENST00000595993 RPGRQ92834 1020 aaKnown RBP20.85■□□□□ 0.93
USHBP1-205ENST00000595993 ZBTB3Q9H5J0 574 aa20.85■□□□□ 0.93
USHBP1-205ENST00000595993 RASSF10A6NK89 507 aa20.84■□□□□ 0.93
USHBP1-205ENST00000595993 PDIA6Q15084 440 aa20.84■□□□□ 0.93
USHBP1-205ENST00000595993 CNTROBQ8N137 903 aa20.84■□□□□ 0.93
USHBP1-205ENST00000595993 PRDM10Q9NQV6 1147 aa20.84■□□□□ 0.93
USHBP1-205ENST00000595993 TRIM35Q9UPQ4 493 aa20.84■□□□□ 0.93
USHBP1-205ENST00000595993 THSD7BQ9C0I4 1608 aa20.83■□□□□ 0.93
USHBP1-205ENST00000595993 ANKRD36CQ5JPF3 1778 aa20.83■□□□□ 0.93
USHBP1-205ENST00000595993 APAF1O14727 1248 aa20.83■□□□□ 0.93
USHBP1-205ENST00000595993 C3orf67Q6ZVT6 689 aa20.83■□□□□ 0.93
USHBP1-205ENST00000595993 SCNN1DP51172 638 aa20.82■□□□□ 0.92
USHBP1-205ENST00000595993 PARP10Q53GL7 1025 aa20.82■□□□□ 0.92
USHBP1-205ENST00000595993 SLC10A5Q5PT55 438 aa20.82■□□□□ 0.92
USHBP1-205ENST00000595993 MAP1SQ66K74 1059 aaPredicted RBP20.82■□□□□ 0.92
USHBP1-205ENST00000595993 SLC51AQ86UW1 340 aa20.82■□□□□ 0.92
USHBP1-205ENST00000595993 BABAM1Q9NWV8 329 aa20.82■□□□□ 0.92
USHBP1-205ENST00000595993 CLEC11AQ9Y240 323 aa20.82■□□□□ 0.92
USHBP1-205ENST00000595993 LAMB2P55268 1798 aa20.82■□□□□ 0.92
USHBP1-205ENST00000595993 PPEF1O14829 653 aaPredicted RBP20.81■□□□□ 0.92
USHBP1-205ENST00000595993 EIF6P56537 245 aaKnown RBP20.81■□□□□ 0.92
USHBP1-205ENST00000595993 LMOD3Q0VAK6 560 aa20.81■□□□□ 0.92
USHBP1-205ENST00000595993 RBM17Q96I25 401 aaKnown RBP20.81■□□□□ 0.92
USHBP1-205ENST00000595993 WBP1LQ9NX94 342 aa20.81■□□□□ 0.92
USHBP1-205ENST00000595993 PPP1R42Q7Z4L9 355 aa20.8■□□□□ 0.92
USHBP1-205ENST00000595993 LARGE2Q8N3Y3 721 aa20.79■□□□□ 0.92
USHBP1-205ENST00000595993 VPS33BQ9H267 617 aa20.79■□□□□ 0.92
USHBP1-205ENST00000595993 TSPYL4Q9UJ04 414 aa20.79■□□□□ 0.92
USHBP1-205ENST00000595993 CTCFP49711 727 aaPredicted RBP20.78■□□□□ 0.92
USHBP1-205ENST00000595993 ATP6V0A2Q9Y487 856 aa20.78■□□□□ 0.92
USHBP1-205ENST00000595993 GJA3Q9Y6H8 435 aa20.78■□□□□ 0.92
USHBP1-205ENST00000595993 EPS15P42566 896 aa20.77■□□□□ 0.92
USHBP1-205ENST00000595993 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
USHBP1-205ENST00000595993 DEFB115Q30KQ5 88 aa20.77■□□□□ 0.92
USHBP1-205ENST00000595993 DIEXFQ68CQ4 756 aaKnown RBP20.77■□□□□ 0.92
USHBP1-205ENST00000595993 NLRP3Q96P20 1036 aa20.77■□□□□ 0.92
USHBP1-205ENST00000595993 RTFDC1Q9BY42 306 aaPredicted RBP20.77■□□□□ 0.92
USHBP1-205ENST00000595993 DDX21Q9NR30 783 aaKnown RBP eCLIP20.77■□□□□ 0.92
USHBP1-205ENST00000595993 TRPM7Q96QT4 1865 aa20.77■□□□□ 0.92
USHBP1-205ENST00000595993 LMOD1P29536 600 aaPredicted RBP20.76■□□□□ 0.91
USHBP1-205ENST00000595993 USP50Q70EL3 339 aaPredicted RBP20.76■□□□□ 0.91
USHBP1-205ENST00000595993 FAM9BQ8IZU0 186 aa20.76■□□□□ 0.91
USHBP1-205ENST00000595993 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
USHBP1-205ENST00000595993 ABCC4O15439 1325 aa20.76■□□□□ 0.91
USHBP1-205ENST00000595993 AIDAQ96BJ3 306 aa20.75■□□□□ 0.91
USHBP1-205ENST00000595993 LRRC37AA6NMS7 1700 aa20.75■□□□□ 0.91
USHBP1-205ENST00000595993 NIM1KQ8IY84 436 aa20.74■□□□□ 0.91
USHBP1-205ENST00000595993 WDR33Q9C0J8 1336 aaKnown RBP20.74■□□□□ 0.91
USHBP1-205ENST00000595993 DUOX1Q9NRD9 1551 aa20.73■□□□□ 0.91
USHBP1-205ENST00000595993 PPIP5K2O43314 1243 aa20.73■□□□□ 0.91
USHBP1-205ENST00000595993 ANXA1P04083 346 aa20.73■□□□□ 0.91
USHBP1-205ENST00000595993 EIF2S2P20042 333 aaKnown RBP20.73■□□□□ 0.91
USHBP1-205ENST00000595993 NLRP10Q86W26 655 aa20.73■□□□□ 0.91
USHBP1-205ENST00000595993 GPRC5DQ9NZD1 345 aa20.73■□□□□ 0.91
USHBP1-205ENST00000595993 CCER2I3L3R5 266 aa20.72■□□□□ 0.91
USHBP1-205ENST00000595993 TCERG1O14776 1098 aaKnown RBP20.72■□□□□ 0.91
USHBP1-205ENST00000595993 BBOX1O75936 387 aa20.72■□□□□ 0.91
USHBP1-205ENST00000595993 AOC3Q16853 763 aa20.72■□□□□ 0.91
USHBP1-205ENST00000595993 HSP90AB3PQ58FF7 597 aa20.72■□□□□ 0.91
USHBP1-205ENST00000595993 SP8Q8IXZ3 490 aa20.72■□□□□ 0.91
USHBP1-205ENST00000595993 SUPT20HQ8NEM7 779 aa20.72■□□□□ 0.91
USHBP1-205ENST00000595993 ZNRF3Q9ULT6 936 aa20.72■□□□□ 0.91
USHBP1-205ENST00000595993 DDX60Q8IY21 1712 aaKnown RBP20.71■□□□□ 0.91
USHBP1-205ENST00000595993 CHL1O00533 1208 aa20.71■□□□□ 0.91
USHBP1-205ENST00000595993 HSPA8P11142 646 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms