RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 FER1L6Q2WGJ9 1857 aa22.24■■□□□ 1.15
CCDC9-202ENST00000595659 POTEIP0CG38 1075 aa22.24■■□□□ 1.15
CCDC9-202ENST00000595659 POTEJP0CG39 1038 aa22.24■■□□□ 1.15
CCDC9-202ENST00000595659 CHPF2Q9P2E5 772 aa22.24■■□□□ 1.15
CCDC9-202ENST00000595659 HOXA10P31260 410 aaPredicted RBP22.23■■□□□ 1.15
CCDC9-202ENST00000595659 PARP10Q53GL7 1025 aa22.23■■□□□ 1.15
CCDC9-202ENST00000595659 RBM17Q96I25 401 aaKnown RBP22.23■■□□□ 1.15
CCDC9-202ENST00000595659 ZNF541Q9H0D2 1346 aa22.23■■□□□ 1.15
CCDC9-202ENST00000595659 IBTKQ9P2D0 1353 aaPredicted RBP22.23■■□□□ 1.15
CCDC9-202ENST00000595659 APAF1O14727 1248 aa22.22■■□□□ 1.15
CCDC9-202ENST00000595659 IARSP41252 1262 aaKnown RBP22.22■■□□□ 1.15
CCDC9-202ENST00000595659 KLRG1Q96E93 195 aa22.22■■□□□ 1.15
CCDC9-202ENST00000595659 DDX21Q9NR30 783 aaKnown RBP eCLIP22.22■■□□□ 1.15
CCDC9-202ENST00000595659 CACNA1SQ13698 1873 aa22.22■■□□□ 1.15
CCDC9-202ENST00000595659 CCDC88AQ3V6T2 1871 aa22.22■■□□□ 1.15
CCDC9-202ENST00000595659 HDGFL1Q5TGJ6 251 aa22.21■■□□□ 1.15
CCDC9-202ENST00000595659 NLRP3Q96P20 1036 aa22.21■■□□□ 1.15
CCDC9-202ENST00000595659 HCLS1P14317 486 aaPredicted RBP22.2■■□□□ 1.14
CCDC9-202ENST00000595659 NLRP10Q86W26 655 aa22.2■■□□□ 1.14
CCDC9-202ENST00000595659 PPEF1O14829 653 aaPredicted RBP22.19■■□□□ 1.14
CCDC9-202ENST00000595659 TCIRG1Q13488 830 aa22.19■■□□□ 1.14
CCDC9-202ENST00000595659 HSP90AB3PQ58FF7 597 aa22.19■■□□□ 1.14
CCDC9-202ENST00000595659 CFAP44Q96MT7 982 aa22.19■■□□□ 1.14
CCDC9-202ENST00000595659 CRAMP1Q96RY5 1269 aa22.19■■□□□ 1.14
CCDC9-202ENST00000595659 MBIPQ9NS73 344 aa22.19■■□□□ 1.14
CCDC9-202ENST00000595659 WDR90Q96KV7 1748 aa22.19■■□□□ 1.14
CCDC9-202ENST00000595659 NUP98P52948 1817 aa22.18■■□□□ 1.14
CCDC9-202ENST00000595659 SLC10A5Q5PT55 438 aa22.18■■□□□ 1.14
CCDC9-202ENST00000595659 DUSP27Q5VZP5 1158 aa22.18■■□□□ 1.14
CCDC9-202ENST00000595659 CC2D2BQ6DHV5 1058 aa22.18■■□□□ 1.14
CCDC9-202ENST00000595659 CHADLQ6NUI6 762 aa22.18■■□□□ 1.14
CCDC9-202ENST00000595659 PSMD1Q99460 953 aa22.18■■□□□ 1.14
CCDC9-202ENST00000595659 TAF1DQ9H5J8 278 aaPredicted RBP22.18■■□□□ 1.14
CCDC9-202ENST00000595659 TRMT112Q9UI30 125 aaKnown RBP22.18■■□□□ 1.14
CCDC9-202ENST00000595659 ARFGEF2Q9Y6D5 1785 aa22.17■■□□□ 1.14
CCDC9-202ENST00000595659 RIC1Q4ADV7 1423 aa22.17■■□□□ 1.14
CCDC9-202ENST00000595659 IQCA1LA6NCM1 817 aa22.17■■□□□ 1.14
CCDC9-202ENST00000595659 L3MBTL3Q96JM7 780 aaPredicted RBP22.17■■□□□ 1.14
CCDC9-202ENST00000595659 SNED1Q8TER0 1413 aa22.16■■□□□ 1.14
CCDC9-202ENST00000595659 FZD9O00144 591 aa22.16■■□□□ 1.14
CCDC9-202ENST00000595659 ELL2O00472 640 aaPredicted RBP22.16■■□□□ 1.14
CCDC9-202ENST00000595659 CCDC184Q52MB2 194 aa22.16■■□□□ 1.14
CCDC9-202ENST00000595659 EAPPQ56P03 285 aaPredicted RBP22.16■■□□□ 1.14
CCDC9-202ENST00000595659 JDP2Q8WYK2 163 aa22.16■■□□□ 1.14
CCDC9-202ENST00000595659 ABCC4O15439 1325 aa22.15■■□□□ 1.14
CCDC9-202ENST00000595659 ANKRD13DQ6ZTN6 518 aa22.15■■□□□ 1.14
CCDC9-202ENST00000595659 DBF4Q9UBU7 674 aaPredicted RBP22.15■■□□□ 1.14
CCDC9-202ENST00000595659 GJA3Q9Y6H8 435 aa22.15■■□□□ 1.14
CCDC9-202ENST00000595659 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.14
CCDC9-202ENST00000595659 ATP5J2-PTCD1G3V325 749 aa22.14■■□□□ 1.13
CCDC9-202ENST00000595659 LARGE2Q8N3Y3 721 aa22.14■■□□□ 1.13
CCDC9-202ENST00000595659 HOXB7P09629 217 aa22.13■■□□□ 1.13
CCDC9-202ENST00000595659 ZNF853P0CG23 659 aa22.13■■□□□ 1.13
CCDC9-202ENST00000595659 JMYQ8N9B5 988 aa22.13■■□□□ 1.13
CCDC9-202ENST00000595659 PLBD2Q8NHP8 589 aa22.13■■□□□ 1.13
CCDC9-202ENST00000595659 HACL1Q9UJ83 578 aa22.13■■□□□ 1.13
CCDC9-202ENST00000595659 CLEC11AQ9Y240 323 aa22.13■■□□□ 1.13
CCDC9-202ENST00000595659 SH3TC1Q8TE82 1336 aa22.12■■□□□ 1.13
CCDC9-202ENST00000595659 DICER1Q9UPY3 1922 aaKnown RBP22.12■■□□□ 1.13
CCDC9-202ENST00000595659 EPHX2P34913 555 aa22.12■■□□□ 1.13
CCDC9-202ENST00000595659 EIF6P56537 245 aaKnown RBP22.12■■□□□ 1.13
CCDC9-202ENST00000595659 RTL5Q5HYW3 569 aaPredicted RBP22.12■■□□□ 1.13
CCDC9-202ENST00000595659 IFFO2Q5TF58 517 aa22.12■■□□□ 1.13
CCDC9-202ENST00000595659 LDHDQ86WU2 507 aa22.12■■□□□ 1.13
CCDC9-202ENST00000595659 TMX4Q9H1E5 349 aaPredicted RBP22.12■■□□□ 1.13
CCDC9-202ENST00000595659 ATP6V0A2Q9Y487 856 aa22.12■■□□□ 1.13
CCDC9-202ENST00000595659 GPC2Q8N158 579 aa22.11■■□□□ 1.13
CCDC9-202ENST00000595659 IFT57Q9NWB7 429 aa22.11■■□□□ 1.13
CCDC9-202ENST00000595659 HYPKQ9NX55 129 aa22.11■■□□□ 1.13
CCDC9-202ENST00000595659 COL4A5P29400 1685 aa22.11■■□□□ 1.13
CCDC9-202ENST00000595659 PPIP5K2O43314 1243 aa22.1■■□□□ 1.13
CCDC9-202ENST00000595659 GNAI1P63096 354 aa22.1■■□□□ 1.13
CCDC9-202ENST00000595659 GRIPAP1Q4V328 841 aa22.1■■□□□ 1.13
CCDC9-202ENST00000595659 FAM89AQ96GI7 184 aa22.1■■□□□ 1.13
CCDC9-202ENST00000595659 ISCA1Q9BUE6 129 aa22.1■■□□□ 1.13
CCDC9-202ENST00000595659 BBOX1O75936 387 aa22.09■■□□□ 1.13
CCDC9-202ENST00000595659 AOC3Q16853 763 aa22.09■■□□□ 1.13
CCDC9-202ENST00000595659 DDX46Q7L014 1031 aaKnown RBP22.09■■□□□ 1.13
CCDC9-202ENST00000595659 C8orf58Q8NAV2 365 aa22.09■■□□□ 1.13
CCDC9-202ENST00000595659 CALD1Q05682 793 aaKnown RBP22.08■■□□□ 1.13
CCDC9-202ENST00000595659 NIM1KQ8IY84 436 aa22.08■■□□□ 1.13
CCDC9-202ENST00000595659 PHAXQ9H814 394 aaKnown RBP22.08■■□□□ 1.13
CCDC9-202ENST00000595659 MAP1SQ66K74 1059 aaPredicted RBP22.07■■□□□ 1.12
CCDC9-202ENST00000595659 DPP8Q6V1X1 898 aaPredicted RBP22.07■■□□□ 1.12
CCDC9-202ENST00000595659 RIC3Q7Z5B4 369 aa22.07■■□□□ 1.12
CCDC9-202ENST00000595659 SP8Q8IXZ3 490 aa22.07■■□□□ 1.12
CCDC9-202ENST00000595659 MKRN1Q9UHC7 482 aaKnown RBP22.07■■□□□ 1.12
CCDC9-202ENST00000595659 GRAPQ13588 217 aa22.06■■□□□ 1.12
CCDC9-202ENST00000595659 MPNDQ8N594 471 aa22.06■■□□□ 1.12
CCDC9-202ENST00000595659 GRAPLQ8TC17 118 aaPredicted RBP22.06■■□□□ 1.12
CCDC9-202ENST00000595659 ITGBL1O95965 494 aaPredicted RBP22.05■■□□□ 1.12
CCDC9-202ENST00000595659 CREBZFQ9NS37 354 aa22.05■■□□□ 1.12
CCDC9-202ENST00000595659 EPS15P42566 896 aa22.04■■□□□ 1.12
CCDC9-202ENST00000595659 SCNN1DP51172 638 aa22.04■■□□□ 1.12
CCDC9-202ENST00000595659 GOLGA2Q08379 1002 aa22.04■■□□□ 1.12
CCDC9-202ENST00000595659 PNMA8AQ86V59 439 aaPredicted RBP22.04■■□□□ 1.12
CCDC9-202ENST00000595659 TSPYL6Q8N831 410 aa22.04■■□□□ 1.12
CCDC9-202ENST00000595659 TSR2Q969E8 191 aaKnown RBP22.04■■□□□ 1.12
CCDC9-202ENST00000595659 RTFDC1Q9BY42 306 aaPredicted RBP22.04■■□□□ 1.12
CCDC9-202ENST00000595659 PASKQ96RG2 1323 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms