RNA–Protein interactions for RNA: ENST00000594942.5

SOX2-OT-221, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 675 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-221ENST00000594942 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
SOX2-OT-221ENST00000594942 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-221ENST00000594942 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
SOX2-OT-221ENST00000594942 ANKRD36CQ5JPF3 1778 aa16.31■□□□□ 0.2
SOX2-OT-221ENST00000594942 IQCA1LA6NCM1 817 aa16.31■□□□□ 0.2
SOX2-OT-221ENST00000594942 IARSP41252 1262 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-221ENST00000594942 PROSER3Q2NL68 480 aa16.31■□□□□ 0.2
SOX2-OT-221ENST00000594942 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
SOX2-OT-221ENST00000594942 RPGRQ92834 1020 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-221ENST00000594942 CRAMP1Q96RY5 1269 aa16.31■□□□□ 0.2
SOX2-OT-221ENST00000594942 FZD9O00144 591 aa16.3■□□□□ 0.2
SOX2-OT-221ENST00000594942 HOXB7P09629 217 aa16.3■□□□□ 0.2
SOX2-OT-221ENST00000594942 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
SOX2-OT-221ENST00000594942 SLC10A5Q5PT55 438 aa16.3■□□□□ 0.2
SOX2-OT-221ENST00000594942 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
SOX2-OT-221ENST00000594942 RBM17Q96I25 401 aaKnown RBP16.3■□□□□ 0.2
SOX2-OT-221ENST00000594942 PRKRIP1Q9H875 184 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-221ENST00000594942 DDX21Q9NR30 783 aaKnown RBP eCLIP16.3■□□□□ 0.2
SOX2-OT-221ENST00000594942 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
SOX2-OT-221ENST00000594942 ANXA1P04083 346 aa16.29■□□□□ 0.2
SOX2-OT-221ENST00000594942 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
SOX2-OT-221ENST00000594942 UTP14AQ9BVJ6 771 aaKnown RBP16.29■□□□□ 0.2
SOX2-OT-221ENST00000594942 ZNF541Q9H0D2 1346 aa16.28■□□□□ 0.2
SOX2-OT-221ENST00000594942 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
SOX2-OT-221ENST00000594942 XAGE3Q8WTP9 111 aa16.28■□□□□ 0.2
SOX2-OT-221ENST00000594942 NLRP3Q96P20 1036 aa16.28■□□□□ 0.2
SOX2-OT-221ENST00000594942 TAF1DQ9H5J8 278 aaPredicted RBP16.28■□□□□ 0.2
SOX2-OT-221ENST00000594942 PCNTO95613 3336 aa16.27■□□□□ 0.2
SOX2-OT-221ENST00000594942 POTEIP0CG38 1075 aa16.27■□□□□ 0.2
SOX2-OT-221ENST00000594942 POTEJP0CG39 1038 aa16.27■□□□□ 0.2
SOX2-OT-221ENST00000594942 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
SOX2-OT-221ENST00000594942 LDHDQ86WU2 507 aa16.27■□□□□ 0.2
SOX2-OT-221ENST00000594942 PPEF1O14829 653 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-221ENST00000594942 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
SOX2-OT-221ENST00000594942 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
SOX2-OT-221ENST00000594942 NLRP10Q86W26 655 aa16.26■□□□□ 0.19
SOX2-OT-221ENST00000594942 CFAP44Q96MT7 982 aa16.26■□□□□ 0.19
SOX2-OT-221ENST00000594942 ADAMTSL1Q8N6G6 1762 aa16.26■□□□□ 0.19
SOX2-OT-221ENST00000594942 COL4A5P29400 1685 aa16.25■□□□□ 0.19
SOX2-OT-221ENST00000594942 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
SOX2-OT-221ENST00000594942 GPC2Q8N158 579 aa16.25■□□□□ 0.19
SOX2-OT-221ENST00000594942 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
SOX2-OT-221ENST00000594942 NECTIN2Q92692 538 aa16.25■□□□□ 0.19
SOX2-OT-221ENST00000594942 HACL1Q9UJ83 578 aa16.25■□□□□ 0.19
SOX2-OT-221ENST00000594942 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
SOX2-OT-221ENST00000594942 LAMB2P55268 1798 aa16.25■□□□□ 0.19
SOX2-OT-221ENST00000594942 PASKQ96RG2 1323 aa16.24■□□□□ 0.19
SOX2-OT-221ENST00000594942 HDGFL1Q5TGJ6 251 aa16.24■□□□□ 0.19
SOX2-OT-221ENST00000594942 VPS33BQ9H267 617 aa16.24■□□□□ 0.19
SOX2-OT-221ENST00000594942 CREBZFQ9NS37 354 aa16.24■□□□□ 0.19
SOX2-OT-221ENST00000594942 CHPF2Q9P2E5 772 aa16.24■□□□□ 0.19
SOX2-OT-221ENST00000594942 ATP6V0A2Q9Y487 856 aa16.24■□□□□ 0.19
SOX2-OT-221ENST00000594942 ABCC4O15439 1325 aa16.23■□□□□ 0.19
SOX2-OT-221ENST00000594942 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
SOX2-OT-221ENST00000594942 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
SOX2-OT-221ENST00000594942 DBF4Q9UBU7 674 aaPredicted RBP16.23■□□□□ 0.19
SOX2-OT-221ENST00000594942 SH3TC1Q8TE82 1336 aa16.22■□□□□ 0.19
SOX2-OT-221ENST00000594942 BBOX1O75936 387 aa16.22■□□□□ 0.19
SOX2-OT-221ENST00000594942 EPHX2P34913 555 aa16.22■□□□□ 0.19
SOX2-OT-221ENST00000594942 EIF6P56537 245 aaKnown RBP16.22■□□□□ 0.19
SOX2-OT-221ENST00000594942 PNMA8AQ86V59 439 aaPredicted RBP16.22■□□□□ 0.19
SOX2-OT-221ENST00000594942 TRMT112Q9UI30 125 aaKnown RBP16.22■□□□□ 0.19
SOX2-OT-221ENST00000594942 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
SOX2-OT-221ENST00000594942 SLC51AQ86UW1 340 aa16.21■□□□□ 0.19
SOX2-OT-221ENST00000594942 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
SOX2-OT-221ENST00000594942 ISCA1Q9BUE6 129 aa16.21■□□□□ 0.19
SOX2-OT-221ENST00000594942 RTFDC1Q9BY42 306 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-221ENST00000594942 TMX4Q9H1E5 349 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-221ENST00000594942 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
SOX2-OT-221ENST00000594942 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
SOX2-OT-221ENST00000594942 HYPKQ9NX55 129 aa16.21■□□□□ 0.19
SOX2-OT-221ENST00000594942 ITGBL1O95965 494 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-221ENST00000594942 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-221ENST00000594942 CALD1Q05682 793 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-221ENST00000594942 ANKRD13DQ6ZTN6 518 aa16.2■□□□□ 0.18
SOX2-OT-221ENST00000594942 SP8Q8IXZ3 490 aa16.2■□□□□ 0.18
SOX2-OT-221ENST00000594942 SUPT20HQ8NEM7 779 aa16.2■□□□□ 0.18
SOX2-OT-221ENST00000594942 LTBP1Q14766 1721 aa16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 APAF1O14727 1248 aa16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 TCERG1O14776 1098 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 GNAI1P63096 354 aa16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 TRIM28Q13263 835 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 GRAPQ13588 217 aa16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 EAPPQ56P03 285 aaPredicted RBP16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 DDX46Q7L014 1031 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
SOX2-OT-221ENST00000594942 PPIP5K2O43314 1243 aa16.18■□□□□ 0.18
SOX2-OT-221ENST00000594942 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
SOX2-OT-221ENST00000594942 NIM1KQ8IY84 436 aa16.18■□□□□ 0.18
SOX2-OT-221ENST00000594942 LRRC37AA6NMS7 1700 aa16.17■□□□□ 0.18
SOX2-OT-221ENST00000594942 CNTNAP1P78357 1384 aa16.17■□□□□ 0.18
SOX2-OT-221ENST00000594942 LMOD1P29536 600 aaPredicted RBP16.17■□□□□ 0.18
SOX2-OT-221ENST00000594942 SCNN1DP51172 638 aa16.17■□□□□ 0.18
SOX2-OT-221ENST00000594942 AOC3Q16853 763 aa16.17■□□□□ 0.18
SOX2-OT-221ENST00000594942 CLEC11AQ9Y240 323 aa16.17■□□□□ 0.18
SOX2-OT-221ENST00000594942 GJA3Q9Y6H8 435 aa16.17■□□□□ 0.18
SOX2-OT-221ENST00000594942 TMEM88BA6NKF7 163 aa16.16■□□□□ 0.18
SOX2-OT-221ENST00000594942 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-221ENST00000594942 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms