RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 VEGFBP49765 207 aa24.65■■□□□ 1.54
PDE4C-205ENST00000593594 CC2D2BQ6DHV5 1058 aa24.65■■□□□ 1.54
PDE4C-205ENST00000593594 THUMPD2Q9BTF0 503 aaKnown RBP24.65■■□□□ 1.54
PDE4C-205ENST00000593594 UBN2Q6ZU65 1347 aa24.64■■□□□ 1.54
PDE4C-205ENST00000593594 HOXA10P31260 410 aaPredicted RBP24.64■■□□□ 1.54
PDE4C-205ENST00000593594 NFE2L2Q16236 605 aa24.64■■□□□ 1.54
PDE4C-205ENST00000593594 RPGRQ92834 1020 aaKnown RBP24.64■■□□□ 1.54
PDE4C-205ENST00000593594 ZBTB3Q9H5J0 574 aa24.64■■□□□ 1.54
PDE4C-205ENST00000593594 RIC1Q4ADV7 1423 aa24.63■■□□□ 1.53
PDE4C-205ENST00000593594 SUSD4Q5VX71 490 aa24.63■■□□□ 1.53
PDE4C-205ENST00000593594 MAP1SQ66K74 1059 aaPredicted RBP24.63■■□□□ 1.53
PDE4C-205ENST00000593594 CNTROBQ8N137 903 aa24.63■■□□□ 1.53
PDE4C-205ENST00000593594 IBTKQ9P2D0 1353 aaPredicted RBP24.63■■□□□ 1.53
PDE4C-205ENST00000593594 COL4A5P29400 1685 aa24.62■■□□□ 1.53
PDE4C-205ENST00000593594 EIF6P56537 245 aaKnown RBP24.61■■□□□ 1.53
PDE4C-205ENST00000593594 ZNF34Q8IZ26 560 aa24.61■■□□□ 1.53
PDE4C-205ENST00000593594 GRIPAP1Q4V328 841 aa24.6■■□□□ 1.53
PDE4C-205ENST00000593594 GIGYF2Q6Y7W6 1299 aaKnown RBP24.6■■□□□ 1.53
PDE4C-205ENST00000593594 RBM17Q96I25 401 aaKnown RBP24.6■■□□□ 1.53
PDE4C-205ENST00000593594 CRAMP1Q96RY5 1269 aa24.6■■□□□ 1.53
PDE4C-205ENST00000593594 GJA3Q9Y6H8 435 aa24.6■■□□□ 1.53
PDE4C-205ENST00000593594 NTSR2O95665 410 aa24.59■■□□□ 1.53
PDE4C-205ENST00000593594 AIDAQ96BJ3 306 aa24.59■■□□□ 1.53
PDE4C-205ENST00000593594 PRDM10Q9NQV6 1147 aa24.59■■□□□ 1.53
PDE4C-205ENST00000593594 ERBB4Q15303 1308 aa24.59■■□□□ 1.53
PDE4C-205ENST00000593594 CTCFP49711 727 aaPredicted RBP24.58■■□□□ 1.53
PDE4C-205ENST00000593594 C3orf67Q6ZVT6 689 aa24.58■■□□□ 1.53
PDE4C-205ENST00000593594 SLC51AQ86UW1 340 aa24.58■■□□□ 1.53
PDE4C-205ENST00000593594 LARGE2Q8N3Y3 721 aa24.58■■□□□ 1.53
PDE4C-205ENST00000593594 RASSF10A6NK89 507 aa24.57■■□□□ 1.52
PDE4C-205ENST00000593594 TCERG1O14776 1098 aaKnown RBP24.57■■□□□ 1.52
PDE4C-205ENST00000593594 PPEF1O14829 653 aaPredicted RBP24.57■■□□□ 1.52
PDE4C-205ENST00000593594 LMOD1P29536 600 aaPredicted RBP24.57■■□□□ 1.52
PDE4C-205ENST00000593594 DEFB115Q30KQ5 88 aa24.57■■□□□ 1.52
PDE4C-205ENST00000593594 PNNQ9H307 717 aaKnown RBP24.57■■□□□ 1.52
PDE4C-205ENST00000593594 WBP1LQ9NX94 342 aa24.57■■□□□ 1.52
PDE4C-205ENST00000593594 MAPK8IP3Q9UPT6 1336 aa24.57■■□□□ 1.52
PDE4C-205ENST00000593594 PPP1R42Q7Z4L9 355 aa24.56■■□□□ 1.52
PDE4C-205ENST00000593594 LTBP1Q14766 1721 aa24.55■■□□□ 1.52
PDE4C-205ENST00000593594 SCNN1DP51172 638 aa24.55■■□□□ 1.52
PDE4C-205ENST00000593594 PARP10Q53GL7 1025 aa24.55■■□□□ 1.52
PDE4C-205ENST00000593594 TSPYL4Q9UJ04 414 aa24.55■■□□□ 1.52
PDE4C-205ENST00000593594 EPS15P42566 896 aa24.54■■□□□ 1.52
PDE4C-205ENST00000593594 LRP10Q7Z4F1 713 aa24.54■■□□□ 1.52
PDE4C-205ENST00000593594 NLRP3Q96P20 1036 aa24.54■■□□□ 1.52
PDE4C-205ENST00000593594 DDX21Q9NR30 783 aaKnown RBP eCLIP24.54■■□□□ 1.52
PDE4C-205ENST00000593594 PDIA6Q15084 440 aa24.53■■□□□ 1.52
PDE4C-205ENST00000593594 ABT1Q9ULW3 272 aaKnown RBP24.53■■□□□ 1.52
PDE4C-205ENST00000593594 EIF2S2P20042 333 aaKnown RBP24.52■■□□□ 1.52
PDE4C-205ENST00000593594 SLC10A5Q5PT55 438 aa24.52■■□□□ 1.52
PDE4C-205ENST00000593594 NIM1KQ8IY84 436 aa24.52■■□□□ 1.52
PDE4C-205ENST00000593594 UTP14AQ9BVJ6 771 aaKnown RBP24.52■■□□□ 1.52
PDE4C-205ENST00000593594 WDR33Q9C0J8 1336 aaKnown RBP24.52■■□□□ 1.52
PDE4C-205ENST00000593594 PPIP5K2O43314 1243 aa24.51■■□□□ 1.51
PDE4C-205ENST00000593594 LBX1P52954 281 aa24.51■■□□□ 1.51
PDE4C-205ENST00000593594 ATP6V0A2Q9Y487 856 aa24.51■■□□□ 1.51
PDE4C-205ENST00000593594 FMR1Q06787 632 aaKnown RBP eCLIP24.5■■□□□ 1.51
PDE4C-205ENST00000593594 AOC3Q16853 763 aa24.5■■□□□ 1.51
PDE4C-205ENST00000593594 PROSER3Q2NL68 480 aa24.5■■□□□ 1.51
PDE4C-205ENST00000593594 USP50Q70EL3 339 aaPredicted RBP24.5■■□□□ 1.51
PDE4C-205ENST00000593594 TMX4Q9H1E5 349 aaPredicted RBP24.5■■□□□ 1.51
PDE4C-205ENST00000593594 ANXA1P04083 346 aa24.49■■□□□ 1.51
PDE4C-205ENST00000593594 RIPK4P57078 832 aa24.49■■□□□ 1.51
PDE4C-205ENST00000593594 VPS33BQ9H267 617 aa24.49■■□□□ 1.51
PDE4C-205ENST00000593594 ABCC4O15439 1325 aa24.48■■□□□ 1.51
PDE4C-205ENST00000593594 MAP2K1Q02750 393 aaPredicted RBP24.48■■□□□ 1.51
PDE4C-205ENST00000593594 HSPA8P11142 646 aaKnown RBP24.47■■□□□ 1.51
PDE4C-205ENST00000593594 BABAM1Q9NWV8 329 aa24.47■■□□□ 1.51
PDE4C-205ENST00000593594 SUPT20HQ8NEM7 779 aa24.46■■□□□ 1.51
PDE4C-205ENST00000593594 RTFDC1Q9BY42 306 aaPredicted RBP24.46■■□□□ 1.51
PDE4C-205ENST00000593594 GPRC5DQ9NZD1 345 aa24.46■■□□□ 1.51
PDE4C-205ENST00000593594 TRAF5O00463 557 aa24.45■■□□□ 1.5
PDE4C-205ENST00000593594 CXCL9Q07325 125 aa24.45■■□□□ 1.5
PDE4C-205ENST00000593594 CST9Q5W186 159 aa24.45■■□□□ 1.5
PDE4C-205ENST00000593594 ZNRF3Q9ULT6 936 aa24.45■■□□□ 1.5
PDE4C-205ENST00000593594 BBOX1O75936 387 aa24.44■■□□□ 1.5
PDE4C-205ENST00000593594 HCLS1P14317 486 aaPredicted RBP24.44■■□□□ 1.5
PDE4C-205ENST00000593594 HSP90AB3PQ58FF7 597 aa24.44■■□□□ 1.5
PDE4C-205ENST00000593594 COPS6Q7L5N1 327 aa24.44■■□□□ 1.5
PDE4C-205ENST00000593594 NLRP10Q86W26 655 aa24.44■■□□□ 1.5
PDE4C-205ENST00000593594 CAPNS2Q96L46 248 aa24.44■■□□□ 1.5
PDE4C-205ENST00000593594 ADARB2Q9NS39 739 aaKnown RBP24.44■■□□□ 1.5
PDE4C-205ENST00000593594 TMPOP42166 694 aaKnown RBP24.43■■□□□ 1.5
PDE4C-205ENST00000593594 AIMP1Q12904 312 aaKnown RBP24.43■■□□□ 1.5
PDE4C-205ENST00000593594 DPP8Q6V1X1 898 aaPredicted RBP24.43■■□□□ 1.5
PDE4C-205ENST00000593594 PAXIP1Q6ZW49 1069 aaPredicted RBP24.43■■□□□ 1.5
PDE4C-205ENST00000593594 SP8Q8IXZ3 490 aa24.43■■□□□ 1.5
PDE4C-205ENST00000593594 XAGE3Q8WTP9 111 aa24.43■■□□□ 1.5
PDE4C-205ENST00000593594 NECTIN2Q92692 538 aa24.43■■□□□ 1.5
PDE4C-205ENST00000593594 ECE1P42892 770 aa24.42■■□□□ 1.5
PDE4C-205ENST00000593594 LMOD3Q0VAK6 560 aa24.42■■□□□ 1.5
PDE4C-205ENST00000593594 MPNDQ8N594 471 aa24.42■■□□□ 1.5
PDE4C-205ENST00000593594 TRPM7Q96QT4 1865 aa24.42■■□□□ 1.5
PDE4C-205ENST00000593594 LAMB2P55268 1798 aa24.42■■□□□ 1.5
PDE4C-205ENST00000593594 GMPSP49915 693 aaPredicted RBP24.41■■□□□ 1.5
PDE4C-205ENST00000593594 TCIRG1Q13488 830 aa24.41■■□□□ 1.5
PDE4C-205ENST00000593594 CYP4F22Q6NT55 531 aa24.41■■□□□ 1.5
PDE4C-205ENST00000593594 TRMT112Q9UI30 125 aaKnown RBP24.41■■□□□ 1.5
PDE4C-205ENST00000593594 TLL2Q9Y6L7 1015 aa24.41■■□□□ 1.5
PDE4C-205ENST00000593594 THSD7BQ9C0I4 1608 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms