RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 ZNF277Q9NRM2 450 aaPredicted RBP28.67■■■□□ 2.18
PTPN2-215ENST00000592776 DUSP27Q5VZP5 1158 aa28.66■■■□□ 2.18
PTPN2-215ENST00000592776 DPY19L2Q6NUT2 758 aa28.66■■■□□ 2.18
PTPN2-215ENST00000592776 PPP1R42Q7Z4L9 355 aa28.66■■■□□ 2.18
PTPN2-215ENST00000592776 RPGRQ92834 1020 aaKnown RBP28.66■■■□□ 2.18
PTPN2-215ENST00000592776 DDNO94850 711 aaPredicted RBP28.65■■■□□ 2.18
PTPN2-215ENST00000592776 ZNF853P0CG23 659 aa28.65■■■□□ 2.18
PTPN2-215ENST00000592776 FKBP4Q02790 459 aaKnown RBP eCLIP28.65■■■□□ 2.18
PTPN2-215ENST00000592776 PARP10Q53GL7 1025 aa28.65■■■□□ 2.18
PTPN2-215ENST00000592776 SYNE4Q8N205 404 aa28.65■■■□□ 2.18
PTPN2-215ENST00000592776 UTP14AQ9BVJ6 771 aaKnown RBP28.65■■■□□ 2.18
PTPN2-215ENST00000592776 APLP1P51693 650 aa28.64■■■□□ 2.18
PTPN2-215ENST00000592776 HTRA3P83110 453 aa28.64■■■□□ 2.18
PTPN2-215ENST00000592776 TCERG1O14776 1098 aaKnown RBP28.63■■■□□ 2.17
PTPN2-215ENST00000592776 HOXA10P31260 410 aaPredicted RBP28.63■■■□□ 2.17
PTPN2-215ENST00000592776 NLRP10Q86W26 655 aa28.63■■■□□ 2.17
PTPN2-215ENST00000592776 RIC1Q4ADV7 1423 aa28.62■■■□□ 2.17
PTPN2-215ENST00000592776 ELL2O00472 640 aaPredicted RBP28.62■■■□□ 2.17
PTPN2-215ENST00000592776 FSTL1Q12841 308 aa28.62■■■□□ 2.17
PTPN2-215ENST00000592776 TCIRG1Q13488 830 aa28.62■■■□□ 2.17
PTPN2-215ENST00000592776 RTKN2Q8IZC4 609 aa28.62■■■□□ 2.17
PTPN2-215ENST00000592776 SLC10A5Q5PT55 438 aa28.61■■■□□ 2.17
PTPN2-215ENST00000592776 ZNF316A6NFI3 1004 aaPredicted RBP28.6■■■□□ 2.17
PTPN2-215ENST00000592776 HOXB7P09629 217 aa28.6■■■□□ 2.17
PTPN2-215ENST00000592776 HCLS1P14317 486 aaPredicted RBP28.6■■■□□ 2.17
PTPN2-215ENST00000592776 RBM17Q96I25 401 aaKnown RBP28.6■■■□□ 2.17
PTPN2-215ENST00000592776 NLRP3Q96P20 1036 aa28.6■■■□□ 2.17
PTPN2-215ENST00000592776 IFT57Q9NWB7 429 aa28.6■■■□□ 2.17
PTPN2-215ENST00000592776 WDR90Q96KV7 1748 aa28.6■■■□□ 2.17
PTPN2-215ENST00000592776 SNED1Q8TER0 1413 aa28.6■■■□□ 2.17
PTPN2-215ENST00000592776 HSP90AB3PQ58FF7 597 aa28.59■■■□□ 2.17
PTPN2-215ENST00000592776 SMC1BQ8NDV3 1235 aa28.59■■■□□ 2.17
PTPN2-215ENST00000592776 CRAMP1Q96RY5 1269 aa28.59■■■□□ 2.17
PTPN2-215ENST00000592776 DBF4Q9UBU7 674 aaPredicted RBP28.59■■■□□ 2.17
PTPN2-215ENST00000592776 ANKRD36CQ5JPF3 1778 aa28.59■■■□□ 2.17
PTPN2-215ENST00000592776 GNAI1P63096 354 aa28.58■■■□□ 2.17
PTPN2-215ENST00000592776 IARSP41252 1262 aaKnown RBP28.57■■■□□ 2.16
PTPN2-215ENST00000592776 ANKRD13DQ6ZTN6 518 aa28.57■■■□□ 2.16
PTPN2-215ENST00000592776 DNAJC5GQ8N7S2 189 aa28.57■■■□□ 2.16
PTPN2-215ENST00000592776 C8orf58Q8NAV2 365 aa28.57■■■□□ 2.16
PTPN2-215ENST00000592776 PLBD2Q8NHP8 589 aa28.57■■■□□ 2.16
PTPN2-215ENST00000592776 TRMT112Q9UI30 125 aaKnown RBP28.57■■■□□ 2.16
PTPN2-215ENST00000592776 ZNF541Q9H0D2 1346 aa28.57■■■□□ 2.16
PTPN2-215ENST00000592776 ATP5J2-PTCD1G3V325 749 aa28.56■■■□□ 2.16
PTPN2-215ENST00000592776 PPEF1O14829 653 aaPredicted RBP28.56■■■□□ 2.16
PTPN2-215ENST00000592776 POTEIP0CG38 1075 aa28.54■■■□□ 2.16
PTPN2-215ENST00000592776 POTEJP0CG39 1038 aa28.54■■■□□ 2.16
PTPN2-215ENST00000592776 PHAXQ9H814 394 aaKnown RBP28.54■■■□□ 2.16
PTPN2-215ENST00000592776 HYPKQ9NX55 129 aa28.54■■■□□ 2.16
PTPN2-215ENST00000592776 CALD1Q05682 793 aaKnown RBP28.53■■■□□ 2.16
PTPN2-215ENST00000592776 PSMD1Q99460 953 aa28.53■■■□□ 2.16
PTPN2-215ENST00000592776 ISCA1Q9BUE6 129 aa28.53■■■□□ 2.16
PTPN2-215ENST00000592776 ABCC4O15439 1325 aa28.52■■■□□ 2.16
PTPN2-215ENST00000592776 CC2D2BQ6DHV5 1058 aa28.52■■■□□ 2.16
PTPN2-215ENST00000592776 COL4A5P29400 1685 aa28.51■■■□□ 2.16
PTPN2-215ENST00000592776 SH3TC1Q8TE82 1336 aa28.51■■■□□ 2.15
PTPN2-215ENST00000592776 TSPYL6Q8N831 410 aa28.51■■■□□ 2.15
PTPN2-215ENST00000592776 MRS2Q9HD23 443 aa28.51■■■□□ 2.15
PTPN2-215ENST00000592776 LAMB2P55268 1798 aa28.51■■■□□ 2.15
PTPN2-215ENST00000592776 RNF123Q5XPI4 1314 aa28.5■■■□□ 2.15
PTPN2-215ENST00000592776 RTL5Q5HYW3 569 aaPredicted RBP28.5■■■□□ 2.15
PTPN2-215ENST00000592776 TSR2Q969E8 191 aaKnown RBP28.5■■■□□ 2.15
PTPN2-215ENST00000592776 FZD9O00144 591 aa28.49■■■□□ 2.15
PTPN2-215ENST00000592776 FAM89AQ96GI7 184 aa28.49■■■□□ 2.15
PTPN2-215ENST00000592776 ANP32CO43423 234 aa28.48■■■□□ 2.15
PTPN2-215ENST00000592776 ATP6V0A2Q9Y487 856 aa28.48■■■□□ 2.15
PTPN2-215ENST00000592776 RIC3Q7Z5B4 369 aa28.47■■■□□ 2.15
PTPN2-215ENST00000592776 L3MBTL3Q96JM7 780 aaPredicted RBP28.47■■■□□ 2.15
PTPN2-215ENST00000592776 WWC1Q8IX03 1113 aa28.46■■■□□ 2.15
PTPN2-215ENST00000592776 JDP2Q8WYK2 163 aa28.46■■■□□ 2.15
PTPN2-215ENST00000592776 TAF1DQ9H5J8 278 aaPredicted RBP28.46■■■□□ 2.15
PTPN2-215ENST00000592776 TAF1P21675 1872 aa28.45■■■□□ 2.15
PTPN2-215ENST00000592776 DDX46Q7L014 1031 aaKnown RBP28.45■■■□□ 2.14
PTPN2-215ENST00000592776 LARGE2Q8N3Y3 721 aa28.45■■■□□ 2.14
PTPN2-215ENST00000592776 CHADLQ6NUI6 762 aa28.44■■■□□ 2.14
PTPN2-215ENST00000592776 SALL2Q9Y467 1007 aaPredicted RBP28.44■■■□□ 2.14
PTPN2-215ENST00000592776 DDX60Q8IY21 1712 aaKnown RBP28.43■■■□□ 2.14
PTPN2-215ENST00000592776 IQCA1LA6NCM1 817 aa28.43■■■□□ 2.14
PTPN2-215ENST00000592776 BBOX1O75936 387 aa28.43■■■□□ 2.14
PTPN2-215ENST00000592776 GOLGA2Q08379 1002 aa28.43■■■□□ 2.14
PTPN2-215ENST00000592776 CCDC27Q2M243 656 aa28.43■■■□□ 2.14
PTPN2-215ENST00000592776 KLRG1Q96E93 195 aa28.43■■■□□ 2.14
PTPN2-215ENST00000592776 MYD88Q99836 296 aa28.43■■■□□ 2.14
PTPN2-215ENST00000592776 GJA3Q9Y6H8 435 aa28.43■■■□□ 2.14
PTPN2-215ENST00000592776 GRAPQ13588 217 aa28.42■■■□□ 2.14
PTPN2-215ENST00000592776 AOC3Q16853 763 aa28.42■■■□□ 2.14
PTPN2-215ENST00000592776 GRIPAP1Q4V328 841 aa28.42■■■□□ 2.14
PTPN2-215ENST00000592776 SP8Q8IXZ3 490 aa28.42■■■□□ 2.14
PTPN2-215ENST00000592776 GRAPLQ8TC17 118 aaPredicted RBP28.42■■■□□ 2.14
PTPN2-215ENST00000592776 PPIP5K2O43314 1243 aa28.41■■■□□ 2.14
PTPN2-215ENST00000592776 TRIM28Q13263 835 aaKnown RBP28.41■■■□□ 2.14
PTPN2-215ENST00000592776 JARID2Q92833 1246 aaPredicted RBP28.41■■■□□ 2.14
PTPN2-215ENST00000592776 TMX4Q9H1E5 349 aaPredicted RBP28.41■■■□□ 2.14
PTPN2-215ENST00000592776 HACL1Q9UJ83 578 aa28.41■■■□□ 2.14
PTPN2-215ENST00000592776 EIF6P56537 245 aaKnown RBP28.4■■■□□ 2.14
PTPN2-215ENST00000592776 EAPPQ56P03 285 aaPredicted RBP28.4■■■□□ 2.14
PTPN2-215ENST00000592776 CCDC30Q5VVM6 783 aa28.4■■■□□ 2.14
PTPN2-215ENST00000592776 GPC2Q8N158 579 aa28.4■■■□□ 2.14
PTPN2-215ENST00000592776 SCN4AP35499 1836 aa28.4■■■□□ 2.14
PTPN2-215ENST00000592776 COL4A1P02462 1669 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms