RNA–Protein interactions for RNA: ENST00000590498.5

TUBD1-210, Transcript of tubulin delta 1, humanhuman

TSL 4

Gene TUBD1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-210ENST00000590498 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
TUBD1-210ENST00000590498 FKBP4Q02790 459 aaKnown RBP eCLIP14.18□□□□□ -0.14
TUBD1-210ENST00000590498 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
TUBD1-210ENST00000590498 SOGA3Q5TF21 947 aa14.18□□□□□ -0.14
TUBD1-210ENST00000590498 TPTE2Q6XPS3 522 aa14.18□□□□□ -0.14
TUBD1-210ENST00000590498 GALR2O43603 387 aaPredicted RBP14.17□□□□□ -0.14
TUBD1-210ENST00000590498 TAF7Q15545 349 aaPredicted RBP14.17□□□□□ -0.14
TUBD1-210ENST00000590498 RTF1Q92541 710 aaKnown RBP14.17□□□□□ -0.14
TUBD1-210ENST00000590498 NUDCQ9Y266 331 aa14.17□□□□□ -0.14
TUBD1-210ENST00000590498 RGL2O15211 777 aa14.16□□□□□ -0.14
TUBD1-210ENST00000590498 HTATSF1O43719 755 aaKnown RBP14.16□□□□□ -0.14
TUBD1-210ENST00000590498 LDHDQ86WU2 507 aa14.16□□□□□ -0.14
TUBD1-210ENST00000590498 SYNE4Q8N205 404 aa14.16□□□□□ -0.14
TUBD1-210ENST00000590498 ZNF652Q9Y2D9 606 aa14.16□□□□□ -0.14
TUBD1-210ENST00000590498 CNTNAP1P78357 1384 aa14.16□□□□□ -0.14
TUBD1-210ENST00000590498 COL4A5P29400 1685 aa14.16□□□□□ -0.14
TUBD1-210ENST00000590498 ADAMTSL1Q8N6G6 1762 aa14.15□□□□□ -0.14
TUBD1-210ENST00000590498 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
TUBD1-210ENST00000590498 IQCA1LA6NCM1 817 aa14.15□□□□□ -0.14
TUBD1-210ENST00000590498 FZD9O00144 591 aa14.15□□□□□ -0.14
TUBD1-210ENST00000590498 FOXN1O15353 648 aa14.15□□□□□ -0.14
TUBD1-210ENST00000590498 TTLL7Q6ZT98 887 aa14.15□□□□□ -0.14
TUBD1-210ENST00000590498 NUTM1Q86Y26 1132 aa14.15□□□□□ -0.14
TUBD1-210ENST00000590498 VEGFBP49765 207 aa14.14□□□□□ -0.15
TUBD1-210ENST00000590498 CRY2Q49AN0 593 aa14.14□□□□□ -0.15
TUBD1-210ENST00000590498 RTKN2Q8IZC4 609 aa14.14□□□□□ -0.15
TUBD1-210ENST00000590498 NGEFQ8N5V2 710 aa14.14□□□□□ -0.15
TUBD1-210ENST00000590498 THUMPD2Q9BTF0 503 aaKnown RBP14.14□□□□□ -0.15
TUBD1-210ENST00000590498 EPHX2P34913 555 aa14.13□□□□□ -0.15
TUBD1-210ENST00000590498 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
TUBD1-210ENST00000590498 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
TUBD1-210ENST00000590498 EAPPQ56P03 285 aaPredicted RBP14.13□□□□□ -0.15
TUBD1-210ENST00000590498 PLEKHF1Q96S99 279 aa14.13□□□□□ -0.15
TUBD1-210ENST00000590498 HACL1Q9UJ83 578 aa14.13□□□□□ -0.15
TUBD1-210ENST00000590498 SCN4AP35499 1836 aa14.13□□□□□ -0.15
TUBD1-210ENST00000590498 RNF123Q5XPI4 1314 aa14.13□□□□□ -0.15
TUBD1-210ENST00000590498 UBN2Q6ZU65 1347 aa14.13□□□□□ -0.15
TUBD1-210ENST00000590498 TMEM88BA6NKF7 163 aa14.12□□□□□ -0.15
TUBD1-210ENST00000590498 ERVV-1B6SEH8 477 aa14.12□□□□□ -0.15
TUBD1-210ENST00000590498 ALDH1B1P30837 517 aa14.12□□□□□ -0.15
TUBD1-210ENST00000590498 SUSD4Q5VX71 490 aa14.12□□□□□ -0.15
TUBD1-210ENST00000590498 MAP1SQ66K74 1059 aaPredicted RBP14.12□□□□□ -0.15
TUBD1-210ENST00000590498 C3orf67Q6ZVT6 689 aa14.12□□□□□ -0.15
TUBD1-210ENST00000590498 HOXA10P31260 410 aaPredicted RBP14.11□□□□□ -0.15
TUBD1-210ENST00000590498 FMR1Q06787 632 aaKnown RBP eCLIP14.11□□□□□ -0.15
TUBD1-210ENST00000590498 PSMD1Q99460 953 aa14.11□□□□□ -0.15
TUBD1-210ENST00000590498 RRP7AQ9Y3A4 280 aaKnown RBP14.11□□□□□ -0.15
TUBD1-210ENST00000590498 MAP3K15Q6ZN16 1313 aa14.11□□□□□ -0.15
TUBD1-210ENST00000590498 LTBP1Q14766 1721 aa14.1□□□□□ -0.15
TUBD1-210ENST00000590498 GPTP24298 496 aa14.1□□□□□ -0.15
TUBD1-210ENST00000590498 ZNF34Q8IZ26 560 aa14.1□□□□□ -0.15
TUBD1-210ENST00000590498 CNTROBQ8N137 903 aa14.1□□□□□ -0.15
TUBD1-210ENST00000590498 GPC2Q8N158 579 aa14.1□□□□□ -0.15
TUBD1-210ENST00000590498 LAMB4A4D0S4 1761 aa14.09□□□□□ -0.15
TUBD1-210ENST00000590498 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
TUBD1-210ENST00000590498 MYL6BP14649 208 aa14.09□□□□□ -0.15
TUBD1-210ENST00000590498 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
TUBD1-210ENST00000590498 LRP10Q7Z4F1 713 aa14.09□□□□□ -0.15
TUBD1-210ENST00000590498 ZBTB3Q9H5J0 574 aa14.09□□□□□ -0.15
TUBD1-210ENST00000590498 WBP1LQ9NX94 342 aa14.09□□□□□ -0.15
TUBD1-210ENST00000590498 RASSF10A6NK89 507 aa14.08□□□□□ -0.16
TUBD1-210ENST00000590498 NTSR2O95665 410 aa14.08□□□□□ -0.16
TUBD1-210ENST00000590498 SCNN1DP51172 638 aa14.08□□□□□ -0.16
TUBD1-210ENST00000590498 NYXQ9GZU5 481 aa14.08□□□□□ -0.16
TUBD1-210ENST00000590498 PRDM10Q9NQV6 1147 aa14.08□□□□□ -0.16
TUBD1-210ENST00000590498 NUP98P52948 1817 aa14.08□□□□□ -0.16
TUBD1-210ENST00000590498 TCERG1O14776 1098 aaKnown RBP14.07□□□□□ -0.16
TUBD1-210ENST00000590498 EPS15P42566 896 aa14.07□□□□□ -0.16
TUBD1-210ENST00000590498 PDIA6Q15084 440 aa14.07□□□□□ -0.16
TUBD1-210ENST00000590498 NFE2L2Q16236 605 aa14.07□□□□□ -0.16
TUBD1-210ENST00000590498 PNMA8AQ86V59 439 aaPredicted RBP14.07□□□□□ -0.16
TUBD1-210ENST00000590498 PNISRQ8TF01 805 aaKnown RBP14.07□□□□□ -0.16
TUBD1-210ENST00000590498 GJA3Q9Y6H8 435 aa14.07□□□□□ -0.16
TUBD1-210ENST00000590498 DLG5Q8TDM6 1919 aa14.07□□□□□ -0.16
TUBD1-210ENST00000590498 RIC1Q4ADV7 1423 aa14.07□□□□□ -0.16
TUBD1-210ENST00000590498 LBX1P52954 281 aa14.06□□□□□ -0.16
TUBD1-210ENST00000590498 PROSER3Q2NL68 480 aa14.06□□□□□ -0.16
TUBD1-210ENST00000590498 DEFB115Q30KQ5 88 aa14.06□□□□□ -0.16
TUBD1-210ENST00000590498 CC2D2BQ6DHV5 1058 aa14.06□□□□□ -0.16
TUBD1-210ENST00000590498 JDP2Q8WYK2 163 aa14.06□□□□□ -0.16
TUBD1-210ENST00000590498 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
TUBD1-210ENST00000590498 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
TUBD1-210ENST00000590498 CTCFP49711 727 aaPredicted RBP14.05□□□□□ -0.16
TUBD1-210ENST00000590498 CST9Q5W186 159 aa14.05□□□□□ -0.16
TUBD1-210ENST00000590498 GIGYF2Q6Y7W6 1299 aaKnown RBP14.05□□□□□ -0.16
TUBD1-210ENST00000590498 KIF6Q6ZMV9 814 aa14.05□□□□□ -0.16
TUBD1-210ENST00000590498 RPGRQ92834 1020 aaKnown RBP14.05□□□□□ -0.16
TUBD1-210ENST00000590498 DDX21Q9NR30 783 aaKnown RBP eCLIP14.05□□□□□ -0.16
TUBD1-210ENST00000590498 IBTKQ9P2D0 1353 aaPredicted RBP14.05□□□□□ -0.16
TUBD1-210ENST00000590498 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
TUBD1-210ENST00000590498 ANXA1P04083 346 aa14.04□□□□□ -0.16
TUBD1-210ENST00000590498 HSPA8P11142 646 aaKnown RBP14.04□□□□□ -0.16
TUBD1-210ENST00000590498 EIF6P56537 245 aaKnown RBP14.04□□□□□ -0.16
TUBD1-210ENST00000590498 SLC10A5Q5PT55 438 aa14.04□□□□□ -0.16
TUBD1-210ENST00000590498 WDR33Q9C0J8 1336 aaKnown RBP14.04□□□□□ -0.16
TUBD1-210ENST00000590498 TRAF5O00463 557 aa14.03□□□□□ -0.16
TUBD1-210ENST00000590498 MNX1P50219 401 aaPredicted RBP14.03□□□□□ -0.16
TUBD1-210ENST00000590498 LARGE2Q8N3Y3 721 aa14.03□□□□□ -0.16
TUBD1-210ENST00000590498 RBM17Q96I25 401 aaKnown RBP14.03□□□□□ -0.16
TUBD1-210ENST00000590498 AOC3Q16853 763 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms