RNA–Protein interactions for RNA: ENST00000589369.2

AP3D1-207, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-207ENST00000589369 POTEJP0CG39 1038 aa22.35■■□□□ 1.17
AP3D1-207ENST00000589369 HOXA10P31260 410 aaPredicted RBP22.35■■□□□ 1.17
AP3D1-207ENST00000589369 WDR43Q15061 677 aaKnown RBP eCLIP22.35■■□□□ 1.17
AP3D1-207ENST00000589369 SLC51AQ86UW1 340 aa22.35■■□□□ 1.17
AP3D1-207ENST00000589369 SYNE4Q8N205 404 aa22.35■■□□□ 1.17
AP3D1-207ENST00000589369 IARSP41252 1262 aaKnown RBP22.33■■□□□ 1.17
AP3D1-207ENST00000589369 PARP10Q53GL7 1025 aa22.33■■□□□ 1.17
AP3D1-207ENST00000589369 IFFO2Q5TF58 517 aa22.33■■□□□ 1.17
AP3D1-207ENST00000589369 JMYQ8N9B5 988 aa22.33■■□□□ 1.17
AP3D1-207ENST00000589369 RPGRQ92834 1020 aaKnown RBP22.33■■□□□ 1.17
AP3D1-207ENST00000589369 L3MBTL3Q96JM7 780 aaPredicted RBP22.33■■□□□ 1.17
AP3D1-207ENST00000589369 COPS6Q7L5N1 327 aa22.32■■□□□ 1.16
AP3D1-207ENST00000589369 PPP1R42Q7Z4L9 355 aa22.32■■□□□ 1.16
AP3D1-207ENST00000589369 XAGE3Q8WTP9 111 aa22.32■■□□□ 1.16
AP3D1-207ENST00000589369 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
AP3D1-207ENST00000589369 LAS1LQ9Y4W2 734 aaKnown RBP22.32■■□□□ 1.16
AP3D1-207ENST00000589369 AIMP1Q12904 312 aaKnown RBP22.31■■□□□ 1.16
AP3D1-207ENST00000589369 CRAMP1Q96RY5 1269 aa22.31■■□□□ 1.16
AP3D1-207ENST00000589369 PSMD1Q99460 953 aa22.31■■□□□ 1.16
AP3D1-207ENST00000589369 ANKRD36CQ5JPF3 1778 aa22.3■■□□□ 1.16
AP3D1-207ENST00000589369 COL4A5P29400 1685 aa22.3■■□□□ 1.16
AP3D1-207ENST00000589369 PCNTO95613 3336 aa22.3■■□□□ 1.16
AP3D1-207ENST00000589369 CHADLQ6NUI6 762 aa22.3■■□□□ 1.16
AP3D1-207ENST00000589369 RBM17Q96I25 401 aaKnown RBP22.3■■□□□ 1.16
AP3D1-207ENST00000589369 UTP14AQ9BVJ6 771 aaKnown RBP22.3■■□□□ 1.16
AP3D1-207ENST00000589369 TAF1DQ9H5J8 278 aaPredicted RBP22.3■■□□□ 1.16
AP3D1-207ENST00000589369 DDX21Q9NR30 783 aaKnown RBP eCLIP22.3■■□□□ 1.16
AP3D1-207ENST00000589369 SCN4AP35499 1836 aa22.29■■□□□ 1.16
AP3D1-207ENST00000589369 FZD9O00144 591 aa22.29■■□□□ 1.16
AP3D1-207ENST00000589369 SLC10A5Q5PT55 438 aa22.29■■□□□ 1.16
AP3D1-207ENST00000589369 CC2D2BQ6DHV5 1058 aa22.29■■□□□ 1.16
AP3D1-207ENST00000589369 IQCA1LA6NCM1 817 aa22.28■■□□□ 1.16
AP3D1-207ENST00000589369 TCERG1O14776 1098 aaKnown RBP22.28■■□□□ 1.16
AP3D1-207ENST00000589369 PPEF1O14829 653 aaPredicted RBP22.28■■□□□ 1.16
AP3D1-207ENST00000589369 NLRP10Q86W26 655 aa22.28■■□□□ 1.16
AP3D1-207ENST00000589369 CHPF2Q9P2E5 772 aa22.28■■□□□ 1.16
AP3D1-207ENST00000589369 NLRP3Q96P20 1036 aa22.27■■□□□ 1.16
AP3D1-207ENST00000589369 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
AP3D1-207ENST00000589369 HSP90AB3PQ58FF7 597 aa22.26■■□□□ 1.15
AP3D1-207ENST00000589369 HDGFL1Q5TGJ6 251 aa22.25■■□□□ 1.15
AP3D1-207ENST00000589369 LDHDQ86WU2 507 aa22.25■■□□□ 1.15
AP3D1-207ENST00000589369 CFAP44Q96MT7 982 aa22.25■■□□□ 1.15
AP3D1-207ENST00000589369 ABCC4O15439 1325 aa22.25■■□□□ 1.15
AP3D1-207ENST00000589369 RNF123Q5XPI4 1314 aa22.25■■□□□ 1.15
AP3D1-207ENST00000589369 LAMB2P55268 1798 aa22.25■■□□□ 1.15
AP3D1-207ENST00000589369 HOXB7P09629 217 aa22.24■■□□□ 1.15
AP3D1-207ENST00000589369 HCLS1P14317 486 aaPredicted RBP22.24■■□□□ 1.15
AP3D1-207ENST00000589369 HACL1Q9UJ83 578 aa22.24■■□□□ 1.15
AP3D1-207ENST00000589369 ADAMTSL1Q8N6G6 1762 aa22.23■■□□□ 1.15
AP3D1-207ENST00000589369 GRIPAP1Q4V328 841 aa22.23■■□□□ 1.15
AP3D1-207ENST00000589369 GPC2Q8N158 579 aa22.23■■□□□ 1.15
AP3D1-207ENST00000589369 JDP2Q8WYK2 163 aa22.23■■□□□ 1.15
AP3D1-207ENST00000589369 ZNF428Q96B54 188 aa22.23■■□□□ 1.15
AP3D1-207ENST00000589369 MBIPQ9NS73 344 aa22.23■■□□□ 1.15
AP3D1-207ENST00000589369 APAF1O14727 1248 aa22.22■■□□□ 1.15
AP3D1-207ENST00000589369 ZNF853P0CG23 659 aa22.22■■□□□ 1.15
AP3D1-207ENST00000589369 EPHX2P34913 555 aa22.22■■□□□ 1.15
AP3D1-207ENST00000589369 EAPPQ56P03 285 aaPredicted RBP22.22■■□□□ 1.15
AP3D1-207ENST00000589369 DUSP27Q5VZP5 1158 aa22.22■■□□□ 1.15
AP3D1-207ENST00000589369 TRMT112Q9UI30 125 aaKnown RBP22.22■■□□□ 1.15
AP3D1-207ENST00000589369 ATP6V0A2Q9Y487 856 aa22.22■■□□□ 1.15
AP3D1-207ENST00000589369 PASKQ96RG2 1323 aa22.22■■□□□ 1.15
AP3D1-207ENST00000589369 LARGE2Q8N3Y3 721 aa22.21■■□□□ 1.15
AP3D1-207ENST00000589369 PLBD2Q8NHP8 589 aa22.21■■□□□ 1.15
AP3D1-207ENST00000589369 DBF4Q9UBU7 674 aaPredicted RBP22.21■■□□□ 1.15
AP3D1-207ENST00000589369 SH3TC1Q8TE82 1336 aa22.21■■□□□ 1.15
AP3D1-207ENST00000589369 CREBZFQ9NS37 354 aa22.2■■□□□ 1.14
AP3D1-207ENST00000589369 LTBP1Q14766 1721 aa22.2■■□□□ 1.14
AP3D1-207ENST00000589369 ITGBL1O95965 494 aaPredicted RBP22.19■■□□□ 1.14
AP3D1-207ENST00000589369 EIF6P56537 245 aaKnown RBP22.19■■□□□ 1.14
AP3D1-207ENST00000589369 ANKRD13DQ6ZTN6 518 aa22.19■■□□□ 1.14
AP3D1-207ENST00000589369 ISCA1Q9BUE6 129 aa22.19■■□□□ 1.14
AP3D1-207ENST00000589369 GJA3Q9Y6H8 435 aa22.19■■□□□ 1.14
AP3D1-207ENST00000589369 TAF1P21675 1872 aa22.17■■□□□ 1.14
AP3D1-207ENST00000589369 DDX60Q8IY21 1712 aaKnown RBP22.17■■□□□ 1.14
AP3D1-207ENST00000589369 ATP5J2-PTCD1G3V325 749 aa22.17■■□□□ 1.14
AP3D1-207ENST00000589369 PPIP5K2O43314 1243 aa22.17■■□□□ 1.14
AP3D1-207ENST00000589369 BBOX1O75936 387 aa22.17■■□□□ 1.14
AP3D1-207ENST00000589369 AOC3Q16853 763 aa22.17■■□□□ 1.14
AP3D1-207ENST00000589369 RTFDC1Q9BY42 306 aaPredicted RBP22.17■■□□□ 1.14
AP3D1-207ENST00000589369 IFT57Q9NWB7 429 aa22.17■■□□□ 1.14
AP3D1-207ENST00000589369 HYPKQ9NX55 129 aa22.17■■□□□ 1.14
AP3D1-207ENST00000589369 MKRN1Q9UHC7 482 aaKnown RBP22.17■■□□□ 1.14
AP3D1-207ENST00000589369 CLEC11AQ9Y240 323 aa22.17■■□□□ 1.14
AP3D1-207ENST00000589369 SCNN1DP51172 638 aa22.16■■□□□ 1.14
AP3D1-207ENST00000589369 PNMA8AQ86V59 439 aaPredicted RBP22.16■■□□□ 1.14
AP3D1-207ENST00000589369 SP8Q8IXZ3 490 aa22.16■■□□□ 1.14
AP3D1-207ENST00000589369 NIM1KQ8IY84 436 aa22.16■■□□□ 1.14
AP3D1-207ENST00000589369 GRAPQ13588 217 aa22.15■■□□□ 1.14
AP3D1-207ENST00000589369 CCDC184Q52MB2 194 aa22.15■■□□□ 1.14
AP3D1-207ENST00000589369 COL13A1Q5TAT6 717 aaPredicted RBP22.15■■□□□ 1.14
AP3D1-207ENST00000589369 MAP1SQ66K74 1059 aaPredicted RBP22.15■■□□□ 1.14
AP3D1-207ENST00000589369 DDX46Q7L014 1031 aaKnown RBP22.15■■□□□ 1.14
AP3D1-207ENST00000589369 GRAPLQ8TC17 118 aaPredicted RBP22.15■■□□□ 1.14
AP3D1-207ENST00000589369 FAM89AQ96GI7 184 aa22.15■■□□□ 1.14
AP3D1-207ENST00000589369 TMX4Q9H1E5 349 aaPredicted RBP22.15■■□□□ 1.14
AP3D1-207ENST00000589369 ELL2O00472 640 aaPredicted RBP22.14■■□□□ 1.13
AP3D1-207ENST00000589369 HSPA1AP0DMV8 641 aaKnown RBP22.14■■□□□ 1.13
AP3D1-207ENST00000589369 HSPA1BP0DMV9 641 aaKnown RBP22.14■■□□□ 1.13
AP3D1-207ENST00000589369 EPS15P42566 896 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms