RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 CHPF2Q9P2E5 772 aa20.84■□□□□ 0.93
TMEM259-206ENST00000589055 ANKRD36CQ5JPF3 1778 aa20.83■□□□□ 0.93
TMEM259-206ENST00000589055 ZNF316A6NFI3 1004 aaPredicted RBP20.83■□□□□ 0.93
TMEM259-206ENST00000589055 HDGFL1Q5TGJ6 251 aa20.83■□□□□ 0.93
TMEM259-206ENST00000589055 C3orf67Q6ZVT6 689 aa20.83■□□□□ 0.93
TMEM259-206ENST00000589055 ZNF428Q96B54 188 aa20.83■□□□□ 0.93
TMEM259-206ENST00000589055 CFAP44Q96MT7 982 aa20.83■□□□□ 0.93
TMEM259-206ENST00000589055 IBTKQ9P2D0 1353 aaPredicted RBP20.83■□□□□ 0.92
TMEM259-206ENST00000589055 DICER1Q9UPY3 1922 aaKnown RBP20.82■□□□□ 0.92
TMEM259-206ENST00000589055 ZC3H4Q9UPT8 1303 aaKnown RBP20.82■□□□□ 0.92
TMEM259-206ENST00000589055 ZNF853P0CG23 659 aa20.81■□□□□ 0.92
TMEM259-206ENST00000589055 CRY2Q49AN0 593 aa20.81■□□□□ 0.92
TMEM259-206ENST00000589055 DUSP27Q5VZP5 1158 aa20.81■□□□□ 0.92
TMEM259-206ENST00000589055 DDX21Q9NR30 783 aaKnown RBP eCLIP20.81■□□□□ 0.92
TMEM259-206ENST00000589055 LTBP3Q9NS15 1303 aa20.8■□□□□ 0.92
TMEM259-206ENST00000589055 RIC1Q4ADV7 1423 aa20.8■□□□□ 0.92
TMEM259-206ENST00000589055 GLTPD2A6NH11 291 aa20.8■□□□□ 0.92
TMEM259-206ENST00000589055 CCDC93Q567U6 631 aa20.8■□□□□ 0.92
TMEM259-206ENST00000589055 ELL2O00472 640 aaPredicted RBP20.78■□□□□ 0.92
TMEM259-206ENST00000589055 PARP10Q53GL7 1025 aa20.78■□□□□ 0.92
TMEM259-206ENST00000589055 SOGA3Q5TF21 947 aa20.78■□□□□ 0.92
TMEM259-206ENST00000589055 SYNE4Q8N205 404 aa20.78■□□□□ 0.92
TMEM259-206ENST00000589055 IFT57Q9NWB7 429 aa20.78■□□□□ 0.92
TMEM259-206ENST00000589055 HOXB7P09629 217 aa20.77■□□□□ 0.92
TMEM259-206ENST00000589055 PPP1R42Q7Z4L9 355 aa20.77■□□□□ 0.92
TMEM259-206ENST00000589055 RPGRQ92834 1020 aaKnown RBP20.77■□□□□ 0.92
TMEM259-206ENST00000589055 UTP14AQ9BVJ6 771 aaKnown RBP20.77■□□□□ 0.92
TMEM259-206ENST00000589055 ZNF277Q9NRM2 450 aaPredicted RBP20.77■□□□□ 0.92
TMEM259-206ENST00000589055 SNED1Q8TER0 1413 aa20.77■□□□□ 0.91
TMEM259-206ENST00000589055 ALDH1B1P30837 517 aa20.76■□□□□ 0.91
TMEM259-206ENST00000589055 NLRP10Q86W26 655 aa20.76■□□□□ 0.91
TMEM259-206ENST00000589055 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
TMEM259-206ENST00000589055 LAMB2P55268 1798 aa20.76■□□□□ 0.91
TMEM259-206ENST00000589055 POTECB2RU33 542 aa20.75■□□□□ 0.91
TMEM259-206ENST00000589055 TCERG1O14776 1098 aaKnown RBP20.75■□□□□ 0.91
TMEM259-206ENST00000589055 GNAI1P63096 354 aa20.75■□□□□ 0.91
TMEM259-206ENST00000589055 FKBP4Q02790 459 aaKnown RBP eCLIP20.75■□□□□ 0.91
TMEM259-206ENST00000589055 FAM161AQ3B820 660 aa20.75■□□□□ 0.91
TMEM259-206ENST00000589055 DBF4Q9UBU7 674 aaPredicted RBP20.75■□□□□ 0.91
TMEM259-206ENST00000589055 TCIRG1Q13488 830 aa20.74■□□□□ 0.91
TMEM259-206ENST00000589055 C8orf58Q8NAV2 365 aa20.74■□□□□ 0.91
TMEM259-206ENST00000589055 ANP32CO43423 234 aa20.73■□□□□ 0.91
TMEM259-206ENST00000589055 DDNO94850 711 aaPredicted RBP20.73■□□□□ 0.91
TMEM259-206ENST00000589055 HCLS1P14317 486 aaPredicted RBP20.73■□□□□ 0.91
TMEM259-206ENST00000589055 HOXA10P31260 410 aaPredicted RBP20.73■□□□□ 0.91
TMEM259-206ENST00000589055 HSP90AB3PQ58FF7 597 aa20.73■□□□□ 0.91
TMEM259-206ENST00000589055 TSR2Q969E8 191 aaKnown RBP20.73■□□□□ 0.91
TMEM259-206ENST00000589055 ATP5J2-PTCD1G3V325 749 aa20.72■□□□□ 0.91
TMEM259-206ENST00000589055 VEGFAP15692 232 aaPredicted RBP20.72■□□□□ 0.91
TMEM259-206ENST00000589055 CALD1Q05682 793 aaKnown RBP20.72■□□□□ 0.91
TMEM259-206ENST00000589055 PLBD2Q8NHP8 589 aa20.72■□□□□ 0.91
TMEM259-206ENST00000589055 RBM17Q96I25 401 aaKnown RBP20.72■□□□□ 0.91
TMEM259-206ENST00000589055 PHAXQ9H814 394 aaKnown RBP20.72■□□□□ 0.91
TMEM259-206ENST00000589055 TRMT112Q9UI30 125 aaKnown RBP20.72■□□□□ 0.91
TMEM259-206ENST00000589055 COL4A5P29400 1685 aa20.72■□□□□ 0.91
TMEM259-206ENST00000589055 ZNF541Q9H0D2 1346 aa20.72■□□□□ 0.91
TMEM259-206ENST00000589055 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
TMEM259-206ENST00000589055 DPY19L2Q6NUT2 758 aa20.71■□□□□ 0.91
TMEM259-206ENST00000589055 ANKRD13DQ6ZTN6 518 aa20.71■□□□□ 0.91
TMEM259-206ENST00000589055 RTKN2Q8IZC4 609 aa20.71■□□□□ 0.91
TMEM259-206ENST00000589055 TSPYL6Q8N831 410 aa20.71■□□□□ 0.91
TMEM259-206ENST00000589055 NLRP3Q96P20 1036 aa20.71■□□□□ 0.91
TMEM259-206ENST00000589055 PRDM10Q9NQV6 1147 aa20.71■□□□□ 0.91
TMEM259-206ENST00000589055 DDX60Q8IY21 1712 aaKnown RBP20.7■□□□□ 0.9
TMEM259-206ENST00000589055 SLC10A5Q5PT55 438 aa20.7■□□□□ 0.9
TMEM259-206ENST00000589055 CRAMP1Q96RY5 1269 aa20.7■□□□□ 0.9
TMEM259-206ENST00000589055 HYPKQ9NX55 129 aa20.7■□□□□ 0.9
TMEM259-206ENST00000589055 ABCC4O15439 1325 aa20.7■□□□□ 0.9
TMEM259-206ENST00000589055 IARSP41252 1262 aaKnown RBP20.69■□□□□ 0.9
TMEM259-206ENST00000589055 ISCA1Q9BUE6 129 aa20.69■□□□□ 0.9
TMEM259-206ENST00000589055 TAF1P21675 1872 aa20.69■□□□□ 0.9
TMEM259-206ENST00000589055 WWC1Q8IX03 1113 aa20.68■□□□□ 0.9
TMEM259-206ENST00000589055 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
TMEM259-206ENST00000589055 RNF123Q5XPI4 1314 aa20.68■□□□□ 0.9
TMEM259-206ENST00000589055 SH3TC1Q8TE82 1336 aa20.68■□□□□ 0.9
TMEM259-206ENST00000589055 COL4A1P02462 1669 aa20.67■□□□□ 0.9
TMEM259-206ENST00000589055 FOXN1O15353 648 aa20.67■□□□□ 0.9
TMEM259-206ENST00000589055 POTEIP0CG38 1075 aa20.67■□□□□ 0.9
TMEM259-206ENST00000589055 POTEJP0CG39 1038 aa20.67■□□□□ 0.9
TMEM259-206ENST00000589055 RTL5Q5HYW3 569 aaPredicted RBP20.67■□□□□ 0.9
TMEM259-206ENST00000589055 PSMD1Q99460 953 aa20.67■□□□□ 0.9
TMEM259-206ENST00000589055 FAM89AQ96GI7 184 aa20.66■□□□□ 0.9
TMEM259-206ENST00000589055 CCDC27Q2M243 656 aa20.65■□□□□ 0.9
TMEM259-206ENST00000589055 RIC3Q7Z5B4 369 aa20.65■□□□□ 0.9
TMEM259-206ENST00000589055 GOLGA2Q08379 1002 aa20.64■□□□□ 0.89
TMEM259-206ENST00000589055 CC2D2BQ6DHV5 1058 aa20.64■□□□□ 0.89
TMEM259-206ENST00000589055 MYD88Q99836 296 aa20.63■□□□□ 0.89
TMEM259-206ENST00000589055 MKRN1Q9UHC7 482 aaKnown RBP20.63■□□□□ 0.89
TMEM259-206ENST00000589055 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
TMEM259-206ENST00000589055 FZD9O00144 591 aa20.62■□□□□ 0.89
TMEM259-206ENST00000589055 CTCFP49711 727 aaPredicted RBP20.62■□□□□ 0.89
TMEM259-206ENST00000589055 AIDAQ96BJ3 306 aa20.62■□□□□ 0.89
TMEM259-206ENST00000589055 L3MBTL3Q96JM7 780 aaPredicted RBP20.62■□□□□ 0.89
TMEM259-206ENST00000589055 CREBZFQ9NS37 354 aa20.62■□□□□ 0.89
TMEM259-206ENST00000589055 CCDC30Q5VVM6 783 aa20.61■□□□□ 0.89
TMEM259-206ENST00000589055 DDX46Q7L014 1031 aaKnown RBP20.61■□□□□ 0.89
TMEM259-206ENST00000589055 LARGE2Q8N3Y3 721 aa20.61■□□□□ 0.89
TMEM259-206ENST00000589055 JARID2Q92833 1246 aaPredicted RBP20.61■□□□□ 0.89
TMEM259-206ENST00000589055 SCN4AP35499 1836 aa20.6■□□□□ 0.89
TMEM259-206ENST00000589055 FANCIQ9NVI1 1328 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms