RNA–Protein interactions for RNA: ENST00000589010.1

ERVK-28-201, Transcript of endogenous retrovirus group K member 28, humanhuman

TSL 5

Gene ERVK-28, Length 308 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK-28-201ENST00000589010 TAF1P21675 1872 aa11.36□□□□□ -0.59
ERVK-28-201ENST00000589010 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
ERVK-28-201ENST00000589010 CCDC93Q567U6 631 aa11.36□□□□□ -0.59
ERVK-28-201ENST00000589010 C16orf71Q8IYS4 520 aaPredicted RBP11.36□□□□□ -0.59
ERVK-28-201ENST00000589010 C7orf43Q8WVR3 580 aa11.36□□□□□ -0.59
ERVK-28-201ENST00000589010 RPGRQ92834 1020 aaKnown RBP11.36□□□□□ -0.59
ERVK-28-201ENST00000589010 UTP14AQ9BVJ6 771 aaKnown RBP11.36□□□□□ -0.59
ERVK-28-201ENST00000589010 DBF4Q9UBU7 674 aaPredicted RBP11.36□□□□□ -0.59
ERVK-28-201ENST00000589010 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
ERVK-28-201ENST00000589010 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
ERVK-28-201ENST00000589010 DDX60Q8IY21 1712 aaKnown RBP11.35□□□□□ -0.59
ERVK-28-201ENST00000589010 TOMM70O94826 608 aa11.35□□□□□ -0.59
ERVK-28-201ENST00000589010 CRY2Q49AN0 593 aa11.35□□□□□ -0.59
ERVK-28-201ENST00000589010 HSP90AB3PQ58FF7 597 aa11.35□□□□□ -0.59
ERVK-28-201ENST00000589010 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
ERVK-28-201ENST00000589010 NLRP10Q86W26 655 aa11.35□□□□□ -0.59
ERVK-28-201ENST00000589010 GLTPD2A6NH11 291 aa11.34□□□□□ -0.59
ERVK-28-201ENST00000589010 TCERG1O14776 1098 aaKnown RBP11.34□□□□□ -0.59
ERVK-28-201ENST00000589010 HSPA6P17066 643 aa11.34□□□□□ -0.59
ERVK-28-201ENST00000589010 TCIRG1Q13488 830 aa11.34□□□□□ -0.59
ERVK-28-201ENST00000589010 SYNE4Q8N205 404 aa11.34□□□□□ -0.59
ERVK-28-201ENST00000589010 C8orf58Q8NAV2 365 aa11.34□□□□□ -0.59
ERVK-28-201ENST00000589010 HYPKQ9NX55 129 aa11.34□□□□□ -0.59
ERVK-28-201ENST00000589010 WDR90Q96KV7 1748 aa11.34□□□□□ -0.59
ERVK-28-201ENST00000589010 HCLS1P14317 486 aaPredicted RBP11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 HOXA10P31260 410 aaPredicted RBP11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 FKBP4Q02790 459 aaKnown RBP eCLIP11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 SLC51AQ86UW1 340 aa11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 PLBD2Q8NHP8 589 aa11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 TSR2Q969E8 191 aaKnown RBP11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 RBM17Q96I25 401 aaKnown RBP11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 NLRP3Q96P20 1036 aa11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 ZNF277Q9NRM2 450 aaPredicted RBP11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 TRMT112Q9UI30 125 aaKnown RBP11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
ERVK-28-201ENST00000589010 ATP5J2-PTCD1G3V325 749 aa11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 SLC10A5Q5PT55 438 aa11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 WWC1Q8IX03 1113 aa11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 RBM46Q8TBY0 533 aaKnown RBP11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 CRAMP1Q96RY5 1269 aa11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 PHAXQ9H814 394 aaKnown RBP11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 RNF123Q5XPI4 1314 aa11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
ERVK-28-201ENST00000589010 PPEF1O14829 653 aaPredicted RBP11.31□□□□□ -0.6
ERVK-28-201ENST00000589010 VEGFAP15692 232 aaPredicted RBP11.31□□□□□ -0.6
ERVK-28-201ENST00000589010 GOLGA2Q08379 1002 aa11.31□□□□□ -0.6
ERVK-28-201ENST00000589010 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
ERVK-28-201ENST00000589010 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
ERVK-28-201ENST00000589010 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
ERVK-28-201ENST00000589010 CACNA1FO60840 1977 aa11.3□□□□□ -0.6
ERVK-28-201ENST00000589010 SNED1Q8TER0 1413 aa11.3□□□□□ -0.6
ERVK-28-201ENST00000589010 DDNO94850 711 aaPredicted RBP11.3□□□□□ -0.6
ERVK-28-201ENST00000589010 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
ERVK-28-201ENST00000589010 CCDC30Q5VVM6 783 aa11.3□□□□□ -0.6
ERVK-28-201ENST00000589010 FAM9BQ8IZU0 186 aa11.3□□□□□ -0.6
ERVK-28-201ENST00000589010 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
ERVK-28-201ENST00000589010 ABCC4O15439 1325 aa11.3□□□□□ -0.6
ERVK-28-201ENST00000589010 SCN4AP35499 1836 aa11.3□□□□□ -0.6
ERVK-28-201ENST00000589010 POTECB2RU33 542 aa11.29□□□□□ -0.6
ERVK-28-201ENST00000589010 IARSP41252 1262 aaKnown RBP11.29□□□□□ -0.6
ERVK-28-201ENST00000589010 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
ERVK-28-201ENST00000589010 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
ERVK-28-201ENST00000589010 COL4A5P29400 1685 aa11.29□□□□□ -0.6
ERVK-28-201ENST00000589010 ZNF541Q9H0D2 1346 aa11.29□□□□□ -0.6
ERVK-28-201ENST00000589010 APLP1P51693 650 aa11.28□□□□□ -0.6
ERVK-28-201ENST00000589010 FSTL1Q12841 308 aa11.28□□□□□ -0.6
ERVK-28-201ENST00000589010 TWISTNBQ3B726 338 aaPredicted RBP11.28□□□□□ -0.6
ERVK-28-201ENST00000589010 DDX46Q7L014 1031 aaKnown RBP11.28□□□□□ -0.6
ERVK-28-201ENST00000589010 SMC1BQ8NDV3 1235 aa11.28□□□□□ -0.6
ERVK-28-201ENST00000589010 PSMD1Q99460 953 aa11.28□□□□□ -0.6
ERVK-28-201ENST00000589010 MYD88Q99836 296 aa11.28□□□□□ -0.6
ERVK-28-201ENST00000589010 TMX4Q9H1E5 349 aaPredicted RBP11.28□□□□□ -0.6
ERVK-28-201ENST00000589010 IL16Q14005 1332 aa11.28□□□□□ -0.6
ERVK-28-201ENST00000589010 MYH3P11055 1940 aa11.27□□□□□ -0.6
ERVK-28-201ENST00000589010 LRRC37AA6NMS7 1700 aa11.27□□□□□ -0.61
ERVK-28-201ENST00000589010 DDX58O95786 925 aaKnown RBP11.27□□□□□ -0.61
ERVK-28-201ENST00000589010 JDP2Q8WYK2 163 aa11.27□□□□□ -0.61
ERVK-28-201ENST00000589010 STK31Q9BXU1 1019 aa11.27□□□□□ -0.61
ERVK-28-201ENST00000589010 CHMP4AQ9BY43 222 aa11.27□□□□□ -0.61
ERVK-28-201ENST00000589010 ATP6V0A2Q9Y487 856 aa11.27□□□□□ -0.61
ERVK-28-201ENST00000589010 FANCIQ9NVI1 1328 aa11.27□□□□□ -0.61
ERVK-28-201ENST00000589010 COL4A1P02462 1669 aa11.27□□□□□ -0.61
ERVK-28-201ENST00000589010 SPEF2Q9C093 1822 aa11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 IRS4O14654 1257 aaPredicted RBP11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 HTRA3P83110 453 aa11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 TRIM28Q13263 835 aaKnown RBP11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 GRAPQ13588 217 aa11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 GRAPLQ8TC17 118 aaPredicted RBP11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 MAP3K2Q9Y2U5 619 aa11.26□□□□□ -0.61
ERVK-28-201ENST00000589010 FZD9O00144 591 aa11.25□□□□□ -0.61
ERVK-28-201ENST00000589010 PPIP5K2O43314 1243 aa11.25□□□□□ -0.61
ERVK-28-201ENST00000589010 BBOX1O75936 387 aa11.25□□□□□ -0.61
ERVK-28-201ENST00000589010 NCBP3Q53F19 620 aaKnown RBP11.25□□□□□ -0.61
ERVK-28-201ENST00000589010 G2E3Q7L622 706 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms