RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 ZNF34Q8IZ26 560 aa22.16■■□□□ 1.14
TMED1-203ENST00000588259 JMYQ8N9B5 988 aa22.16■■□□□ 1.14
TMED1-203ENST00000588259 BABAM1Q9NWV8 329 aa22.16■■□□□ 1.14
TMED1-203ENST00000588259 RIC1Q4ADV7 1423 aa22.15■■□□□ 1.14
TMED1-203ENST00000588259 ANKRD36CQ5JPF3 1778 aa22.15■■□□□ 1.14
TMED1-203ENST00000588259 NTSR2O95665 410 aa22.15■■□□□ 1.14
TMED1-203ENST00000588259 PARP10Q53GL7 1025 aa22.15■■□□□ 1.14
TMED1-203ENST00000588259 EAPPQ56P03 285 aaPredicted RBP22.15■■□□□ 1.14
TMED1-203ENST00000588259 RBM17Q96I25 401 aaKnown RBP22.15■■□□□ 1.14
TMED1-203ENST00000588259 PDIA6Q15084 440 aa22.14■■□□□ 1.13
TMED1-203ENST00000588259 JDP2Q8WYK2 163 aa22.14■■□□□ 1.13
TMED1-203ENST00000588259 RUNDC1Q96C34 613 aa22.14■■□□□ 1.13
TMED1-203ENST00000588259 L3MBTL3Q96JM7 780 aaPredicted RBP22.14■■□□□ 1.13
TMED1-203ENST00000588259 UTP14AQ9BVJ6 771 aaKnown RBP22.14■■□□□ 1.13
TMED1-203ENST00000588259 PPEF1O14829 653 aaPredicted RBP22.13■■□□□ 1.13
TMED1-203ENST00000588259 CC2D2BQ6DHV5 1058 aa22.13■■□□□ 1.13
TMED1-203ENST00000588259 TAF1DQ9H5J8 278 aaPredicted RBP22.13■■□□□ 1.13
TMED1-203ENST00000588259 HOXA10P31260 410 aaPredicted RBP22.12■■□□□ 1.13
TMED1-203ENST00000588259 KRT24Q2M2I5 525 aa22.12■■□□□ 1.13
TMED1-203ENST00000588259 C3orf67Q6ZVT6 689 aa22.12■■□□□ 1.13
TMED1-203ENST00000588259 COPS6Q7L5N1 327 aa22.12■■□□□ 1.13
TMED1-203ENST00000588259 LDHDQ86WU2 507 aa22.12■■□□□ 1.13
TMED1-203ENST00000588259 XAGE3Q8WTP9 111 aa22.12■■□□□ 1.13
TMED1-203ENST00000588259 NLRP3Q96P20 1036 aa22.12■■□□□ 1.13
TMED1-203ENST00000588259 PSMD1Q99460 953 aa22.12■■□□□ 1.13
TMED1-203ENST00000588259 TMX4Q9H1E5 349 aaPredicted RBP22.12■■□□□ 1.13
TMED1-203ENST00000588259 HACL1Q9UJ83 578 aa22.12■■□□□ 1.13
TMED1-203ENST00000588259 CLEC11AQ9Y240 323 aa22.12■■□□□ 1.13
TMED1-203ENST00000588259 LRP10Q7Z4F1 713 aa22.11■■□□□ 1.13
TMED1-203ENST00000588259 CRAMP1Q96RY5 1269 aa22.11■■□□□ 1.13
TMED1-203ENST00000588259 GJA3Q9Y6H8 435 aa22.11■■□□□ 1.13
TMED1-203ENST00000588259 RNF123Q5XPI4 1314 aa22.1■■□□□ 1.13
TMED1-203ENST00000588259 HSP90AB3PQ58FF7 597 aa22.1■■□□□ 1.13
TMED1-203ENST00000588259 LARGE2Q8N3Y3 721 aa22.1■■□□□ 1.13
TMED1-203ENST00000588259 EPHX2P34913 555 aa22.09■■□□□ 1.13
TMED1-203ENST00000588259 EIF6P56537 245 aaKnown RBP22.09■■□□□ 1.13
TMED1-203ENST00000588259 SLC51AQ86UW1 340 aa22.09■■□□□ 1.13
TMED1-203ENST00000588259 ADAMTS8Q9UP79 889 aa22.09■■□□□ 1.13
TMED1-203ENST00000588259 LAMB2P55268 1798 aa22.09■■□□□ 1.13
TMED1-203ENST00000588259 SNED1Q8TER0 1413 aa22.08■■□□□ 1.13
TMED1-203ENST00000588259 FZD9O00144 591 aa22.08■■□□□ 1.13
TMED1-203ENST00000588259 CHL1O00533 1208 aa22.08■■□□□ 1.13
TMED1-203ENST00000588259 GRIPAP1Q4V328 841 aa22.08■■□□□ 1.13
TMED1-203ENST00000588259 GPC2Q8N158 579 aa22.08■■□□□ 1.13
TMED1-203ENST00000588259 ZNF428Q96B54 188 aa22.08■■□□□ 1.13
TMED1-203ENST00000588259 DDX21Q9NR30 783 aaKnown RBP eCLIP22.08■■□□□ 1.13
TMED1-203ENST00000588259 CREBZFQ9NS37 354 aa22.08■■□□□ 1.13
TMED1-203ENST00000588259 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
TMED1-203ENST00000588259 MKRN1Q9UHC7 482 aaKnown RBP22.08■■□□□ 1.13
TMED1-203ENST00000588259 TRIM35Q9UPQ4 493 aa22.08■■□□□ 1.13
TMED1-203ENST00000588259 HDGFL1Q5TGJ6 251 aa22.07■■□□□ 1.12
TMED1-203ENST00000588259 COL4A5P29400 1685 aa22.07■■□□□ 1.12
TMED1-203ENST00000588259 HCLS1P14317 486 aaPredicted RBP22.06■■□□□ 1.12
TMED1-203ENST00000588259 LMOD1P29536 600 aaPredicted RBP22.06■■□□□ 1.12
TMED1-203ENST00000588259 NLRP10Q86W26 655 aa22.06■■□□□ 1.12
TMED1-203ENST00000588259 NIM1KQ8IY84 436 aa22.06■■□□□ 1.12
TMED1-203ENST00000588259 TRMT112Q9UI30 125 aaKnown RBP22.06■■□□□ 1.12
TMED1-203ENST00000588259 ABCC4O15439 1325 aa22.06■■□□□ 1.12
TMED1-203ENST00000588259 PPIP5K2O43314 1243 aa22.05■■□□□ 1.12
TMED1-203ENST00000588259 HSPA1AP0DMV8 641 aaKnown RBP22.05■■□□□ 1.12
TMED1-203ENST00000588259 HSPA1BP0DMV9 641 aaKnown RBP22.05■■□□□ 1.12
TMED1-203ENST00000588259 PNMA8AQ86V59 439 aaPredicted RBP22.05■■□□□ 1.12
TMED1-203ENST00000588259 TCIRG1Q13488 830 aa22.04■■□□□ 1.12
TMED1-203ENST00000588259 SLC10A5Q5PT55 438 aa22.04■■□□□ 1.12
TMED1-203ENST00000588259 SH3TC1Q8TE82 1336 aa22.04■■□□□ 1.12
TMED1-203ENST00000588259 COL13A1Q5TAT6 717 aaPredicted RBP22.03■■□□□ 1.12
TMED1-203ENST00000588259 PRKRIP1Q9H875 184 aaPredicted RBP22.03■■□□□ 1.12
TMED1-203ENST00000588259 ATP6V0A2Q9Y487 856 aa22.03■■□□□ 1.12
TMED1-203ENST00000588259 PCNTO95613 3336 aa22.03■■□□□ 1.12
TMED1-203ENST00000588259 AOC3Q16853 763 aa22.02■■□□□ 1.12
TMED1-203ENST00000588259 MAP1SQ66K74 1059 aaPredicted RBP22.02■■□□□ 1.12
TMED1-203ENST00000588259 DDX46Q7L014 1031 aaKnown RBP22.02■■□□□ 1.12
TMED1-203ENST00000588259 PASKQ96RG2 1323 aa22.02■■□□□ 1.12
TMED1-203ENST00000588259 ADAMTSL1Q8N6G6 1762 aa22.02■■□□□ 1.11
TMED1-203ENST00000588259 TAF1P21675 1872 aa22.01■■□□□ 1.11
TMED1-203ENST00000588259 DUSP27Q5VZP5 1158 aa22.01■■□□□ 1.11
TMED1-203ENST00000588259 DPP8Q6V1X1 898 aaPredicted RBP22.01■■□□□ 1.11
TMED1-203ENST00000588259 DBF4Q9UBU7 674 aaPredicted RBP22.01■■□□□ 1.11
TMED1-203ENST00000588259 TMEM88BA6NKF7 163 aa22■■□□□ 1.11
TMED1-203ENST00000588259 HOXB7P09629 217 aa22■■□□□ 1.11
TMED1-203ENST00000588259 SUPT20HQ8NEM7 779 aa22■■□□□ 1.11
TMED1-203ENST00000588259 PLBD2Q8NHP8 589 aa22■■□□□ 1.11
TMED1-203ENST00000588259 CFAP44Q96MT7 982 aa22■■□□□ 1.11
TMED1-203ENST00000588259 MBIPQ9NS73 344 aa22■■□□□ 1.11
TMED1-203ENST00000588259 ANKRD13DQ6ZTN6 518 aa21.99■■□□□ 1.11
TMED1-203ENST00000588259 CNTROBQ8N137 903 aa21.99■■□□□ 1.11
TMED1-203ENST00000588259 LTBP1Q14766 1721 aa21.99■■□□□ 1.11
TMED1-203ENST00000588259 CNTNAP1P78357 1384 aa21.99■■□□□ 1.11
TMED1-203ENST00000588259 DDX60Q8IY21 1712 aaKnown RBP21.98■■□□□ 1.11
TMED1-203ENST00000588259 ATP5J2-PTCD1G3V325 749 aa21.98■■□□□ 1.11
TMED1-203ENST00000588259 APAF1O14727 1248 aa21.98■■□□□ 1.11
TMED1-203ENST00000588259 BBOX1O75936 387 aa21.98■■□□□ 1.11
TMED1-203ENST00000588259 ITGBL1O95965 494 aaPredicted RBP21.98■■□□□ 1.11
TMED1-203ENST00000588259 TNS4Q8IZW8 715 aa21.98■■□□□ 1.11
TMED1-203ENST00000588259 MPNDQ8N594 471 aa21.98■■□□□ 1.11
TMED1-203ENST00000588259 HYPKQ9NX55 129 aa21.98■■□□□ 1.11
TMED1-203ENST00000588259 EPS15P42566 896 aa21.97■■□□□ 1.11
TMED1-203ENST00000588259 SCNN1DP51172 638 aa21.97■■□□□ 1.11
TMED1-203ENST00000588259 GRAPQ13588 217 aa21.97■■□□□ 1.11
TMED1-203ENST00000588259 RTL5Q5HYW3 569 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms