RNA–Protein interactions for RNA: ENST00000587421.5

SMAD2-210, Transcript of SMAD family member 2, humanhuman

TSL 4

Gene SMAD2, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-210ENST00000587421 NUTM1Q86Y26 1132 aa18.09■□□□□ 0.49
SMAD2-210ENST00000587421 ZNF34Q8IZ26 560 aa18.09■□□□□ 0.49
SMAD2-210ENST00000587421 BABAM1Q9NWV8 329 aa18.09■□□□□ 0.49
SMAD2-210ENST00000587421 HACL1Q9UJ83 578 aa18.09■□□□□ 0.49
SMAD2-210ENST00000587421 SUSD4Q5VX71 490 aa18.08■□□□□ 0.48
SMAD2-210ENST00000587421 GIGYF2Q6Y7W6 1299 aaKnown RBP18.08■□□□□ 0.48
SMAD2-210ENST00000587421 PNMA8AQ86V59 439 aaPredicted RBP18.08■□□□□ 0.48
SMAD2-210ENST00000587421 JDP2Q8WYK2 163 aa18.08■□□□□ 0.48
SMAD2-210ENST00000587421 SLX4Q8IY92 1834 aa18.07■□□□□ 0.48
SMAD2-210ENST00000587421 COL11A2P13942 1736 aaPredicted RBP18.07■□□□□ 0.48
SMAD2-210ENST00000587421 PPP1R42Q7Z4L9 355 aa18.07■□□□□ 0.48
SMAD2-210ENST00000587421 GPC2Q8N158 579 aa18.07■□□□□ 0.48
SMAD2-210ENST00000587421 RPGRQ92834 1020 aaKnown RBP18.07■□□□□ 0.48
SMAD2-210ENST00000587421 RBM17Q96I25 401 aaKnown RBP18.07■□□□□ 0.48
SMAD2-210ENST00000587421 CRAMP1Q96RY5 1269 aa18.07■□□□□ 0.48
SMAD2-210ENST00000587421 GPTP24298 496 aa18.06■□□□□ 0.48
SMAD2-210ENST00000587421 EPHX2P34913 555 aa18.06■□□□□ 0.48
SMAD2-210ENST00000587421 RIPK4P57078 832 aa18.06■□□□□ 0.48
SMAD2-210ENST00000587421 PARP10Q53GL7 1025 aa18.06■□□□□ 0.48
SMAD2-210ENST00000587421 SLC10A5Q5PT55 438 aa18.06■□□□□ 0.48
SMAD2-210ENST00000587421 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
SMAD2-210ENST00000587421 TSPYL4Q9UJ04 414 aa18.06■□□□□ 0.48
SMAD2-210ENST00000587421 ADAMTSL1Q8N6G6 1762 aa18.06■□□□□ 0.48
SMAD2-210ENST00000587421 ZNF541Q9H0D2 1346 aa18.05■□□□□ 0.48
SMAD2-210ENST00000587421 ARFGEF2Q9Y6D5 1785 aa18.05■□□□□ 0.48
SMAD2-210ENST00000587421 RALBP1Q15311 655 aa18.05■□□□□ 0.48
SMAD2-210ENST00000587421 DEFB115Q30KQ5 88 aa18.05■□□□□ 0.48
SMAD2-210ENST00000587421 NLRP3Q96P20 1036 aa18.05■□□□□ 0.48
SMAD2-210ENST00000587421 IBTKQ9P2D0 1353 aaPredicted RBP18.04■□□□□ 0.48
SMAD2-210ENST00000587421 UBN2Q6ZU65 1347 aa18.04■□□□□ 0.48
SMAD2-210ENST00000587421 EIF6P56537 245 aaKnown RBP18.04■□□□□ 0.48
SMAD2-210ENST00000587421 PDIA6Q15084 440 aa18.04■□□□□ 0.48
SMAD2-210ENST00000587421 EAPPQ56P03 285 aaPredicted RBP18.04■□□□□ 0.48
SMAD2-210ENST00000587421 CLEC11AQ9Y240 323 aa18.04■□□□□ 0.48
SMAD2-210ENST00000587421 THSD7BQ9C0I4 1608 aa18.04■□□□□ 0.48
SMAD2-210ENST00000587421 WDR33Q9C0J8 1336 aaKnown RBP18.03■□□□□ 0.48
SMAD2-210ENST00000587421 NTSR2O95665 410 aa18.03■□□□□ 0.48
SMAD2-210ENST00000587421 LRP10Q7Z4F1 713 aa18.03■□□□□ 0.48
SMAD2-210ENST00000587421 TMX4Q9H1E5 349 aaPredicted RBP18.03■□□□□ 0.48
SMAD2-210ENST00000587421 VPS33BQ9H267 617 aa18.03■□□□□ 0.48
SMAD2-210ENST00000587421 ABCC12Q96J65 1359 aa18.03■□□□□ 0.48
SMAD2-210ENST00000587421 BCORQ6W2J9 1755 aa18.02■□□□□ 0.48
SMAD2-210ENST00000587421 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.48
SMAD2-210ENST00000587421 LMOD3Q0VAK6 560 aa18.02■□□□□ 0.48
SMAD2-210ENST00000587421 CNTROBQ8N137 903 aa18.02■□□□□ 0.48
SMAD2-210ENST00000587421 UTP14AQ9BVJ6 771 aaKnown RBP18.02■□□□□ 0.48
SMAD2-210ENST00000587421 RIC1Q4ADV7 1423 aa18.01■□□□□ 0.47
SMAD2-210ENST00000587421 CCDC85CA6NKD9 419 aa18.01■□□□□ 0.47
SMAD2-210ENST00000587421 TMPOP42166 694 aaKnown RBP18.01■□□□□ 0.47
SMAD2-210ENST00000587421 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
SMAD2-210ENST00000587421 SNED1Q8TER0 1413 aa18■□□□□ 0.47
SMAD2-210ENST00000587421 PPEF1O14829 653 aaPredicted RBP18■□□□□ 0.47
SMAD2-210ENST00000587421 BBOX1O75936 387 aa18■□□□□ 0.47
SMAD2-210ENST00000587421 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
SMAD2-210ENST00000587421 LARGE2Q8N3Y3 721 aa18■□□□□ 0.47
SMAD2-210ENST00000587421 BEGAINQ9BUH8 593 aa17.99■□□□□ 0.47
SMAD2-210ENST00000587421 ATP6V0A2Q9Y487 856 aa17.99■□□□□ 0.47
SMAD2-210ENST00000587421 GJA3Q9Y6H8 435 aa17.99■□□□□ 0.47
SMAD2-210ENST00000587421 LMOD1P29536 600 aaPredicted RBP17.98■□□□□ 0.47
SMAD2-210ENST00000587421 MAP1SQ66K74 1059 aaPredicted RBP17.98■□□□□ 0.47
SMAD2-210ENST00000587421 C3orf67Q6ZVT6 689 aa17.98■□□□□ 0.47
SMAD2-210ENST00000587421 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
SMAD2-210ENST00000587421 CACNA1SQ13698 1873 aa17.97■□□□□ 0.47
SMAD2-210ENST00000587421 CHL1O00533 1208 aa17.97■□□□□ 0.47
SMAD2-210ENST00000587421 TCERG1O14776 1098 aaKnown RBP17.97■□□□□ 0.47
SMAD2-210ENST00000587421 ECE1P42892 770 aa17.97■□□□□ 0.47
SMAD2-210ENST00000587421 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
SMAD2-210ENST00000587421 NIM1KQ8IY84 436 aa17.97■□□□□ 0.47
SMAD2-210ENST00000587421 SUPT20HQ8NEM7 779 aa17.97■□□□□ 0.47
SMAD2-210ENST00000587421 ABT1Q9ULW3 272 aaKnown RBP17.97■□□□□ 0.47
SMAD2-210ENST00000587421 TCIRG1Q13488 830 aa17.96■□□□□ 0.47
SMAD2-210ENST00000587421 USP50Q70EL3 339 aaPredicted RBP17.96■□□□□ 0.47
SMAD2-210ENST00000587421 SP8Q8IXZ3 490 aa17.96■□□□□ 0.47
SMAD2-210ENST00000587421 RTFDC1Q9BY42 306 aaPredicted RBP17.96■□□□□ 0.47
SMAD2-210ENST00000587421 DDX21Q9NR30 783 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMAD2-210ENST00000587421 ANXA1P04083 346 aa17.95■□□□□ 0.46
SMAD2-210ENST00000587421 EPS15P42566 896 aa17.95■□□□□ 0.46
SMAD2-210ENST00000587421 SCNN1DP51172 638 aa17.95■□□□□ 0.46
SMAD2-210ENST00000587421 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
SMAD2-210ENST00000587421 XAGE3Q8WTP9 111 aa17.95■□□□□ 0.46
SMAD2-210ENST00000587421 PPIP5K2O43314 1243 aa17.94■□□□□ 0.46
SMAD2-210ENST00000587421 AIMP1Q12904 312 aaKnown RBP17.94■□□□□ 0.46
SMAD2-210ENST00000587421 CAPNS2Q96L46 248 aa17.94■□□□□ 0.46
SMAD2-210ENST00000587421 ZNRF3Q9ULT6 936 aa17.94■□□□□ 0.46
SMAD2-210ENST00000587421 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
SMAD2-210ENST00000587421 TRMT112Q9UI30 125 aaKnown RBP17.93■□□□□ 0.46
SMAD2-210ENST00000587421 SH3TC1Q8TE82 1336 aa17.93■□□□□ 0.46
SMAD2-210ENST00000587421 CA12O43570 354 aa17.92■□□□□ 0.46
SMAD2-210ENST00000587421 HCLS1P14317 486 aaPredicted RBP17.92■□□□□ 0.46
SMAD2-210ENST00000587421 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
SMAD2-210ENST00000587421 AOC3Q16853 763 aa17.92■□□□□ 0.46
SMAD2-210ENST00000587421 DPP8Q6V1X1 898 aaPredicted RBP17.92■□□□□ 0.46
SMAD2-210ENST00000587421 DDX46Q7L014 1031 aaKnown RBP17.92■□□□□ 0.46
SMAD2-210ENST00000587421 MPNDQ8N594 471 aa17.92■□□□□ 0.46
SMAD2-210ENST00000587421 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
SMAD2-210ENST00000587421 GPR101Q96P66 508 aaPredicted RBP17.92■□□□□ 0.46
SMAD2-210ENST00000587421 ABCC4O15439 1325 aa17.92■□□□□ 0.46
SMAD2-210ENST00000587421 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
SMAD2-210ENST00000587421 HOXB7P09629 217 aa17.91■□□□□ 0.46
SMAD2-210ENST00000587421 MAP2K2P36507 400 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms