RNA–Protein interactions for RNA: ENST00000586568.1

CXXC1-206, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-206ENST00000586568 NTSR2O95665 410 aa19.35■□□□□ 0.69
CXXC1-206ENST00000586568 EPHX2P34913 555 aa19.35■□□□□ 0.69
CXXC1-206ENST00000586568 PNMA8AQ86V59 439 aaPredicted RBP19.35■□□□□ 0.69
CXXC1-206ENST00000586568 TNS4Q8IZW8 715 aa19.35■□□□□ 0.69
CXXC1-206ENST00000586568 MKRN1Q9UHC7 482 aaKnown RBP19.35■□□□□ 0.69
CXXC1-206ENST00000586568 RALBP1Q15311 655 aa19.34■□□□□ 0.69
CXXC1-206ENST00000586568 PARP10Q53GL7 1025 aa19.34■□□□□ 0.69
CXXC1-206ENST00000586568 EAPPQ56P03 285 aaPredicted RBP19.34■□□□□ 0.69
CXXC1-206ENST00000586568 SLC10A5Q5PT55 438 aa19.34■□□□□ 0.69
CXXC1-206ENST00000586568 RBM17Q96I25 401 aaKnown RBP19.34■□□□□ 0.69
CXXC1-206ENST00000586568 RIC1Q4ADV7 1423 aa19.34■□□□□ 0.69
CXXC1-206ENST00000586568 EIF2S2P20042 333 aaKnown RBP19.33■□□□□ 0.68
CXXC1-206ENST00000586568 C3orf67Q6ZVT6 689 aa19.33■□□□□ 0.68
CXXC1-206ENST00000586568 PPP1R42Q7Z4L9 355 aa19.33■□□□□ 0.68
CXXC1-206ENST00000586568 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
CXXC1-206ENST00000586568 TMEM88BA6NKF7 163 aa19.32■□□□□ 0.68
CXXC1-206ENST00000586568 TMPOP42166 694 aaKnown RBP19.32■□□□□ 0.68
CXXC1-206ENST00000586568 CLEC11AQ9Y240 323 aa19.32■□□□□ 0.68
CXXC1-206ENST00000586568 CCDC88AQ3V6T2 1871 aa19.31■□□□□ 0.68
CXXC1-206ENST00000586568 PROSER3Q2NL68 480 aa19.31■□□□□ 0.68
CXXC1-206ENST00000586568 CNTROBQ8N137 903 aa19.31■□□□□ 0.68
CXXC1-206ENST00000586568 NLRP3Q96P20 1036 aa19.31■□□□□ 0.68
CXXC1-206ENST00000586568 UTP14AQ9BVJ6 771 aaKnown RBP19.31■□□□□ 0.68
CXXC1-206ENST00000586568 CNTNAP1P78357 1384 aa19.31■□□□□ 0.68
CXXC1-206ENST00000586568 DICER1Q9UPY3 1922 aaKnown RBP19.3■□□□□ 0.68
CXXC1-206ENST00000586568 EIF6P56537 245 aaKnown RBP19.3■□□□□ 0.68
CXXC1-206ENST00000586568 SLC51AQ86UW1 340 aa19.3■□□□□ 0.68
CXXC1-206ENST00000586568 TCERG1O14776 1098 aaKnown RBP19.29■□□□□ 0.68
CXXC1-206ENST00000586568 PPEF1O14829 653 aaPredicted RBP19.29■□□□□ 0.68
CXXC1-206ENST00000586568 ANXA1P04083 346 aa19.29■□□□□ 0.68
CXXC1-206ENST00000586568 LMOD3Q0VAK6 560 aa19.29■□□□□ 0.68
CXXC1-206ENST00000586568 MAP1SQ66K74 1059 aaPredicted RBP19.29■□□□□ 0.68
CXXC1-206ENST00000586568 LARGE2Q8N3Y3 721 aa19.29■□□□□ 0.68
CXXC1-206ENST00000586568 GJA3Q9Y6H8 435 aa19.29■□□□□ 0.68
CXXC1-206ENST00000586568 VEGFBP49765 207 aa19.28■□□□□ 0.68
CXXC1-206ENST00000586568 COPS6Q7L5N1 327 aa19.28■□□□□ 0.68
CXXC1-206ENST00000586568 ATP6V0A2Q9Y487 856 aa19.28■□□□□ 0.68
CXXC1-206ENST00000586568 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.68
CXXC1-206ENST00000586568 CHL1O00533 1208 aa19.27■□□□□ 0.68
CXXC1-206ENST00000586568 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
CXXC1-206ENST00000586568 BBOX1O75936 387 aa19.26■□□□□ 0.67
CXXC1-206ENST00000586568 EPS15P42566 896 aa19.26■□□□□ 0.67
CXXC1-206ENST00000586568 SCNN1DP51172 638 aa19.26■□□□□ 0.67
CXXC1-206ENST00000586568 NLRP10Q86W26 655 aa19.26■□□□□ 0.67
CXXC1-206ENST00000586568 XAGE3Q8WTP9 111 aa19.26■□□□□ 0.67
CXXC1-206ENST00000586568 TMX4Q9H1E5 349 aaPredicted RBP19.26■□□□□ 0.67
CXXC1-206ENST00000586568 KDM3BQ7LBC6 1761 aa19.25■□□□□ 0.67
CXXC1-206ENST00000586568 CAPN15O75808 1086 aa19.25■□□□□ 0.67
CXXC1-206ENST00000586568 AIMP1Q12904 312 aaKnown RBP19.25■□□□□ 0.67
CXXC1-206ENST00000586568 TCIRG1Q13488 830 aa19.25■□□□□ 0.67
CXXC1-206ENST00000586568 HSP90AB3PQ58FF7 597 aa19.25■□□□□ 0.67
CXXC1-206ENST00000586568 NECTIN2Q92692 538 aa19.25■□□□□ 0.67
CXXC1-206ENST00000586568 RTFDC1Q9BY42 306 aaPredicted RBP19.25■□□□□ 0.67
CXXC1-206ENST00000586568 DDX21Q9NR30 783 aaKnown RBP eCLIP19.25■□□□□ 0.67
CXXC1-206ENST00000586568 COL4A5P29400 1685 aa19.24■□□□□ 0.67
CXXC1-206ENST00000586568 RASSF10A6NK89 507 aa19.24■□□□□ 0.67
CXXC1-206ENST00000586568 FOXN1O15353 648 aa19.24■□□□□ 0.67
CXXC1-206ENST00000586568 HCLS1P14317 486 aaPredicted RBP19.24■□□□□ 0.67
CXXC1-206ENST00000586568 LMOD1P29536 600 aaPredicted RBP19.24■□□□□ 0.67
CXXC1-206ENST00000586568 NEUROD2Q15784 382 aa19.24■□□□□ 0.67
CXXC1-206ENST00000586568 DEFB115Q30KQ5 88 aa19.24■□□□□ 0.67
CXXC1-206ENST00000586568 SP8Q8IXZ3 490 aa19.24■□□□□ 0.67
CXXC1-206ENST00000586568 NIM1KQ8IY84 436 aa19.24■□□□□ 0.67
CXXC1-206ENST00000586568 ABCC4O15439 1325 aa19.24■□□□□ 0.67
CXXC1-206ENST00000586568 PPIP5K2O43314 1243 aa19.23■□□□□ 0.67
CXXC1-206ENST00000586568 AOC3Q16853 763 aa19.23■□□□□ 0.67
CXXC1-206ENST00000586568 KRT24Q2M2I5 525 aa19.23■□□□□ 0.67
CXXC1-206ENST00000586568 USP50Q70EL3 339 aaPredicted RBP19.23■□□□□ 0.67
CXXC1-206ENST00000586568 CCDC146Q8IYE0 955 aa19.23■□□□□ 0.67
CXXC1-206ENST00000586568 WBP1LQ9NX94 342 aa19.23■□□□□ 0.67
CXXC1-206ENST00000586568 TRMT112Q9UI30 125 aaKnown RBP19.23■□□□□ 0.67
CXXC1-206ENST00000586568 TRIM35Q9UPQ4 493 aa19.23■□□□□ 0.67
CXXC1-206ENST00000586568 SCN4AP35499 1836 aa19.23■□□□□ 0.67
CXXC1-206ENST00000586568 LAMB4A4D0S4 1761 aa19.22■□□□□ 0.67
CXXC1-206ENST00000586568 DDX10Q13206 875 aaKnown RBP19.22■□□□□ 0.67
CXXC1-206ENST00000586568 SUPT20HQ8NEM7 779 aa19.22■□□□□ 0.67
CXXC1-206ENST00000586568 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
CXXC1-206ENST00000586568 ZNRF3Q9ULT6 936 aa19.22■□□□□ 0.67
CXXC1-206ENST00000586568 MYBBP1AQ9BQG0 1328 aaKnown RBP19.22■□□□□ 0.67
CXXC1-206ENST00000586568 CXCL9Q07325 125 aa19.21■□□□□ 0.67
CXXC1-206ENST00000586568 PRDM10Q9NQV6 1147 aa19.21■□□□□ 0.67
CXXC1-206ENST00000586568 DPP8Q6V1X1 898 aaPredicted RBP19.2■□□□□ 0.66
CXXC1-206ENST00000586568 MPNDQ8N594 471 aa19.2■□□□□ 0.66
CXXC1-206ENST00000586568 GPRC5DQ9NZD1 345 aa19.2■□□□□ 0.66
CXXC1-206ENST00000586568 SH3TC1Q8TE82 1336 aa19.2■□□□□ 0.66
CXXC1-206ENST00000586568 CTCFP49711 727 aaPredicted RBP19.19■□□□□ 0.66
CXXC1-206ENST00000586568 FMR1Q06787 632 aaKnown RBP eCLIP19.19■□□□□ 0.66
CXXC1-206ENST00000586568 DDX46Q7L014 1031 aaKnown RBP19.19■□□□□ 0.66
CXXC1-206ENST00000586568 AIDAQ96BJ3 306 aa19.19■□□□□ 0.66
CXXC1-206ENST00000586568 CHPF2Q9P2E5 772 aa19.19■□□□□ 0.66
CXXC1-206ENST00000586568 ADAMTS8Q9UP79 889 aa19.19■□□□□ 0.66
CXXC1-206ENST00000586568 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
CXXC1-206ENST00000586568 HOXB7P09629 217 aa19.18■□□□□ 0.66
CXXC1-206ENST00000586568 KIAA2012Q0VF49 1180 aa19.18■□□□□ 0.66
CXXC1-206ENST00000586568 GRAPQ13588 217 aa19.18■□□□□ 0.66
CXXC1-206ENST00000586568 CST9Q5W186 159 aa19.18■□□□□ 0.66
CXXC1-206ENST00000586568 ANKRD13DQ6ZTN6 518 aa19.18■□□□□ 0.66
CXXC1-206ENST00000586568 PLBD2Q8NHP8 589 aa19.18■□□□□ 0.66
CXXC1-206ENST00000586568 GRAPLQ8TC17 118 aaPredicted RBP19.18■□□□□ 0.66
CXXC1-206ENST00000586568 ADARB2Q9NS39 739 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms