RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 KLHL34Q8N239 644 aa24.34■■□□□ 1.49
DDX39A-204ENST00000586558 BRIP1Q9BX63 1249 aa24.34■■□□□ 1.49
DDX39A-204ENST00000586558 CWC25Q9NXE8 425 aaPredicted RBP24.34■■□□□ 1.49
DDX39A-204ENST00000586558 RIC1Q4ADV7 1423 aa24.34■■□□□ 1.49
DDX39A-204ENST00000586558 KIF13BQ9NQT8 1826 aa24.33■■□□□ 1.49
DDX39A-204ENST00000586558 PXDNLA1KZ92 1463 aa24.33■■□□□ 1.49
DDX39A-204ENST00000586558 SYT17Q9BSW7 474 aa24.33■■□□□ 1.49
DDX39A-204ENST00000586558 TRMT112Q9UI30 125 aaKnown RBP24.33■■□□□ 1.49
DDX39A-204ENST00000586558 RCAN3Q9UKA8 241 aa24.33■■□□□ 1.49
DDX39A-204ENST00000586558 NEURL1BA8MQ27 555 aa24.32■■□□□ 1.48
DDX39A-204ENST00000586558 TGFB2P61812 414 aa24.32■■□□□ 1.48
DDX39A-204ENST00000586558 PDZRN3Q9UPQ7 1066 aa24.32■■□□□ 1.48
DDX39A-204ENST00000586558 SH3TC1Q8TE82 1336 aa24.32■■□□□ 1.48
DDX39A-204ENST00000586558 PDE6BP35913 854 aa24.31■■□□□ 1.48
DDX39A-204ENST00000586558 BEND3Q5T5X7 828 aa24.31■■□□□ 1.48
DDX39A-204ENST00000586558 CWF19L2Q2TBE0 894 aaKnown RBP24.3■■□□□ 1.48
DDX39A-204ENST00000586558 ERFEQ4G0M1 354 aa24.3■■□□□ 1.48
DDX39A-204ENST00000586558 SLC4A10Q6U841 1118 aa24.3■■□□□ 1.48
DDX39A-204ENST00000586558 NUTM1Q86Y26 1132 aa24.3■■□□□ 1.48
DDX39A-204ENST00000586558 ALDH1L1O75891 902 aa24.29■■□□□ 1.48
DDX39A-204ENST00000586558 PCCAP05165 728 aaPredicted RBP24.29■■□□□ 1.48
DDX39A-204ENST00000586558 HSP90B1P14625 803 aaKnown RBP24.29■■□□□ 1.48
DDX39A-204ENST00000586558 ZBTB38Q8NAP3 1195 aaPredicted RBP24.29■■□□□ 1.48
DDX39A-204ENST00000586558 FRAT1Q92837 279 aaPredicted RBP24.29■■□□□ 1.48
DDX39A-204ENST00000586558 SRCIN1Q9C0H9 1055 aa24.29■■□□□ 1.48
DDX39A-204ENST00000586558 ABCC12Q96J65 1359 aa24.29■■□□□ 1.48
DDX39A-204ENST00000586558 GCKRQ14397 625 aa24.28■■□□□ 1.48
DDX39A-204ENST00000586558 SLC10A5Q5PT55 438 aa24.28■■□□□ 1.48
DDX39A-204ENST00000586558 ZKSCAN2Q63HK3 967 aa24.28■■□□□ 1.48
DDX39A-204ENST00000586558 ATF7IPQ6VMQ6 1270 aa24.28■■□□□ 1.48
DDX39A-204ENST00000586558 CCDC24Q8N4L8 307 aa24.27■■□□□ 1.48
DDX39A-204ENST00000586558 KLRG2A4D1S0 409 aaPredicted RBP24.26■■□□□ 1.47
DDX39A-204ENST00000586558 CCT4P50991 539 aaKnown RBP24.26■■□□□ 1.47
DDX39A-204ENST00000586558 NLGN2Q8NFZ4 835 aa24.26■■□□□ 1.47
DDX39A-204ENST00000586558 FAM89AQ96GI7 184 aa24.26■■□□□ 1.47
DDX39A-204ENST00000586558 TRIM27P14373 513 aa24.25■■□□□ 1.47
DDX39A-204ENST00000586558 ABCC4O15439 1325 aa24.25■■□□□ 1.47
DDX39A-204ENST00000586558 ANKRD31Q8N7Z5 1873 aa24.25■■□□□ 1.47
DDX39A-204ENST00000586558 H0YIN7 160 aa24.24■■□□□ 1.47
DDX39A-204ENST00000586558 C2CD5Q86YS7 1000 aa24.24■■□□□ 1.47
DDX39A-204ENST00000586558 CDHR2Q9BYE9 1310 aa24.24■■□□□ 1.47
DDX39A-204ENST00000586558 KIAA1551Q9HCM1 1747 aa24.24■■□□□ 1.47
DDX39A-204ENST00000586558 H7C1W4 665 aa24.23■■□□□ 1.47
DDX39A-204ENST00000586558 IRS4O14654 1257 aaPredicted RBP24.23■■□□□ 1.47
DDX39A-204ENST00000586558 DPEP1P16444 411 aa24.23■■□□□ 1.47
DDX39A-204ENST00000586558 NLRP3Q96P20 1036 aa24.23■■□□□ 1.47
DDX39A-204ENST00000586558 A0A0G2JLW4 131 aa24.22■■□□□ 1.47
DDX39A-204ENST00000586558 CRY2Q49AN0 593 aa24.22■■□□□ 1.47
DDX39A-204ENST00000586558 SYNE4Q8N205 404 aa24.22■■□□□ 1.47
DDX39A-204ENST00000586558 N4BP2Q86UW6 1770 aaPredicted RBP24.21■■□□□ 1.47
DDX39A-204ENST00000586558 GRM8O00222 908 aa24.21■■□□□ 1.47
DDX39A-204ENST00000586558 SRGNP10124 158 aa24.21■■□□□ 1.47
DDX39A-204ENST00000586558 HCLS1P14317 486 aaPredicted RBP24.21■■□□□ 1.47
DDX39A-204ENST00000586558 CHRNA5P30532 468 aa24.21■■□□□ 1.47
DDX39A-204ENST00000586558 RTL5Q5HYW3 569 aaPredicted RBP24.21■■□□□ 1.47
DDX39A-204ENST00000586558 INTS3Q68E01 1043 aaKnown RBP24.21■■□□□ 1.47
DDX39A-204ENST00000586558 UBE3BQ7Z3V4 1068 aa24.21■■□□□ 1.47
DDX39A-204ENST00000586558 C9orf78Q9NZ63 289 aaPredicted RBP24.21■■□□□ 1.47
DDX39A-204ENST00000586558 TNRC6CQ9HCJ0 1690 aaKnown RBP24.21■■□□□ 1.47
DDX39A-204ENST00000586558 MS4A1P11836 297 aa24.2■■□□□ 1.46
DDX39A-204ENST00000586558 NPR1P16066 1061 aa24.2■■□□□ 1.46
DDX39A-204ENST00000586558 STYK1Q6J9G0 422 aa24.2■■□□□ 1.46
DDX39A-204ENST00000586558 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.2■■□□□ 1.46
DDX39A-204ENST00000586558 LAMB2P55268 1798 aa24.2■■□□□ 1.46
DDX39A-204ENST00000586558 KCNA3P22001 575 aa24.19■■□□□ 1.46
DDX39A-204ENST00000586558 FTSJ3Q8IY81 847 aaKnown RBP24.19■■□□□ 1.46
DDX39A-204ENST00000586558 MASTLQ96GX5 879 aa24.19■■□□□ 1.46
DDX39A-204ENST00000586558 PIM2Q9P1W9 311 aa24.19■■□□□ 1.46
DDX39A-204ENST00000586558 DLEC1Q9Y238 1755 aa24.19■■□□□ 1.46
DDX39A-204ENST00000586558 COL11A2P13942 1736 aaPredicted RBP24.18■■□□□ 1.46
DDX39A-204ENST00000586558 UTYO14607 1347 aa24.18■■□□□ 1.46
DDX39A-204ENST00000586558 PDE8AO60658 829 aa24.18■■□□□ 1.46
DDX39A-204ENST00000586558 CASP7P55210 303 aa24.18■■□□□ 1.46
DDX39A-204ENST00000586558 DZIP1LQ8IYY4 767 aaKnown RBP24.18■■□□□ 1.46
DDX39A-204ENST00000586558 DDX60Q8IY21 1712 aaKnown RBP24.18■■□□□ 1.46
DDX39A-204ENST00000586558 HOXA10P31260 410 aaPredicted RBP24.17■■□□□ 1.46
DDX39A-204ENST00000586558 RPGRQ92834 1020 aaKnown RBP24.17■■□□□ 1.46
DDX39A-204ENST00000586558 CLUAP1Q96AJ1 413 aa24.17■■□□□ 1.46
DDX39A-204ENST00000586558 PLA2G12BQ9BX93 195 aa24.17■■□□□ 1.46
DDX39A-204ENST00000586558 SF3B3Q15393 1217 aaKnown RBP24.16■■□□□ 1.46
DDX39A-204ENST00000586558 C3orf67Q6ZVT6 689 aa24.16■■□□□ 1.46
DDX39A-204ENST00000586558 JARID2Q92833 1246 aaPredicted RBP24.16■■□□□ 1.46
DDX39A-204ENST00000586558 CNKSR1Q969H4 720 aa24.16■■□□□ 1.46
DDX39A-204ENST00000586558 TTLL6Q8N841 843 aa24.15■■□□□ 1.46
DDX39A-204ENST00000586558 ZNF622Q969S3 477 aaKnown RBP eCLIP24.15■■□□□ 1.464e-14■□□□□ 10.2
DDX39A-204ENST00000586558 USP44Q9H0E7 712 aa24.15■■□□□ 1.46
DDX39A-204ENST00000586558 TNNQ9UQP3 1299 aa24.15■■□□□ 1.46
DDX39A-204ENST00000586558 ALDH1B1P30837 517 aa24.14■■□□□ 1.45
DDX39A-204ENST00000586558 CTSWP56202 376 aa24.14■■□□□ 1.45
DDX39A-204ENST00000586558 DALRD3Q5D0E6 543 aaKnown RBP24.14■■□□□ 1.45
DDX39A-204ENST00000586558 RBM17Q96I25 401 aaKnown RBP24.14■■□□□ 1.45
DDX39A-204ENST00000586558 CRAMP1Q96RY5 1269 aa24.14■■□□□ 1.45
DDX39A-204ENST00000586558 CCDC152Q4G0S7 254 aa24.13■■□□□ 1.45
DDX39A-204ENST00000586558 HDAC5Q9UQL6 1122 aa24.13■■□□□ 1.45
DDX39A-204ENST00000586558 BRCA1P38398 1863 aaKnown RBP24.13■■□□□ 1.45
DDX39A-204ENST00000586558 NBPF7P0C2Y1 421 aaPredicted RBP24.12■■□□□ 1.45
DDX39A-204ENST00000586558 DDX46Q7L014 1031 aaKnown RBP24.12■■□□□ 1.45
DDX39A-204ENST00000586558 TMEM57Q8N5G2 664 aa24.12■■□□□ 1.45
DDX39A-204ENST00000586558 RLBP1P12271 317 aa24.11■■□□□ 1.45
DDX39A-204ENST00000586558 PDE3AQ14432 1141 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms