RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 MASTLQ96GX5 879 aa20.63■□□□□ 0.89
ATG4D-205ENST00000586477 RNF181Q9P0P0 153 aa20.63■□□□□ 0.89
ATG4D-205ENST00000586477 ZNF219Q9P2Y4 722 aaPredicted RBP20.63■□□□□ 0.89
ATG4D-205ENST00000586477 TIAM2Q8IVF5 1701 aa20.62■□□□□ 0.89
ATG4D-205ENST00000586477 KIF3CO14782 793 aa20.62■□□□□ 0.89
ATG4D-205ENST00000586477 NTSR2O95665 410 aa20.62■□□□□ 0.89
ATG4D-205ENST00000586477 HDGFL1Q5TGJ6 251 aa20.62■□□□□ 0.89
ATG4D-205ENST00000586477 CCDC30Q5VVM6 783 aa20.62■□□□□ 0.89
ATG4D-205ENST00000586477 PRPF40BQ6NWY9 871 aaKnown RBP20.62■□□□□ 0.89
ATG4D-205ENST00000586477 C8orf58Q8NAV2 365 aa20.62■□□□□ 0.89
ATG4D-205ENST00000586477 C7orf43Q8WVR3 580 aa20.62■□□□□ 0.89
ATG4D-205ENST00000586477 DICER1Q9UPY3 1922 aaKnown RBP20.62■□□□□ 0.89
ATG4D-205ENST00000586477 CNKSR1Q969H4 720 aa20.61■□□□□ 0.89
ATG4D-205ENST00000586477 STK31Q9BXU1 1019 aa20.61■□□□□ 0.89
ATG4D-205ENST00000586477 RIC1Q4ADV7 1423 aa20.61■□□□□ 0.89
ATG4D-205ENST00000586477 CENPBP07199 599 aaPredicted RBP20.6■□□□□ 0.89
ATG4D-205ENST00000586477 AIMP1Q12904 312 aaKnown RBP20.6■□□□□ 0.89
ATG4D-205ENST00000586477 C3orf67Q6ZVT6 689 aa20.6■□□□□ 0.89
ATG4D-205ENST00000586477 CEP350Q5VT06 3117 aa20.59■□□□□ 0.89
ATG4D-205ENST00000586477 ELL2O00472 640 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-205ENST00000586477 VAMP4O75379 141 aa20.59■□□□□ 0.89
ATG4D-205ENST00000586477 NPR1P16066 1061 aa20.59■□□□□ 0.89
ATG4D-205ENST00000586477 CRY2Q49AN0 593 aa20.59■□□□□ 0.89
ATG4D-205ENST00000586477 NYXQ9GZU5 481 aa20.59■□□□□ 0.89
ATG4D-205ENST00000586477 LAMB2P55268 1798 aa20.59■□□□□ 0.89
ATG4D-205ENST00000586477 LMNB1P20700 586 aa20.58■□□□□ 0.89
ATG4D-205ENST00000586477 ALDH1L2Q3SY69 923 aa20.58■□□□□ 0.89
ATG4D-205ENST00000586477 OLFM4Q6UX06 510 aa20.58■□□□□ 0.89
ATG4D-205ENST00000586477 TSPYL6Q8N831 410 aa20.58■□□□□ 0.89
ATG4D-205ENST00000586477 NMRK2Q9NPI5 230 aa20.58■□□□□ 0.89
ATG4D-205ENST00000586477 DBF4Q9UBU7 674 aaPredicted RBP20.58■□□□□ 0.89
ATG4D-205ENST00000586477 SNED1Q8TER0 1413 aa20.57■□□□□ 0.88
ATG4D-205ENST00000586477 HSPA6P17066 643 aa20.56■□□□□ 0.88
ATG4D-205ENST00000586477 PARP10Q53GL7 1025 aa20.56■□□□□ 0.88
ATG4D-205ENST00000586477 SLC51AQ86UW1 340 aa20.56■□□□□ 0.88
ATG4D-205ENST00000586477 NLRP10Q86W26 655 aa20.56■□□□□ 0.88
ATG4D-205ENST00000586477 CACNA1FO60840 1977 aa20.55■□□□□ 0.88
ATG4D-205ENST00000586477 LTBP3Q9NS15 1303 aa20.55■□□□□ 0.88
ATG4D-205ENST00000586477 GTF2E1P29083 439 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-205ENST00000586477 TCIRG1Q13488 830 aa20.55■□□□□ 0.88
ATG4D-205ENST00000586477 SYNE4Q8N205 404 aa20.55■□□□□ 0.88
ATG4D-205ENST00000586477 HOXA10P31260 410 aaPredicted RBP20.54■□□□□ 0.88
ATG4D-205ENST00000586477 SLC10A5Q5PT55 438 aa20.54■□□□□ 0.88
ATG4D-205ENST00000586477 HYPKQ9NX55 129 aa20.54■□□□□ 0.88
ATG4D-205ENST00000586477 KDM2BQ8NHM5 1336 aa20.53■□□□□ 0.88
ATG4D-205ENST00000586477 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
ATG4D-205ENST00000586477 TOMM70O94826 608 aa20.53■□□□□ 0.88
ATG4D-205ENST00000586477 PPP1R42Q7Z4L9 355 aa20.53■□□□□ 0.88
ATG4D-205ENST00000586477 PLBD2Q8NHP8 589 aa20.53■□□□□ 0.88
ATG4D-205ENST00000586477 UTP14AQ9BVJ6 771 aaKnown RBP20.53■□□□□ 0.88
ATG4D-205ENST00000586477 PHAXQ9H814 394 aaKnown RBP20.53■□□□□ 0.88
ATG4D-205ENST00000586477 ISCA1Q9BUE6 129 aa20.52■□□□□ 0.88
ATG4D-205ENST00000586477 RCAN3Q9UKA8 241 aa20.52■□□□□ 0.88
ATG4D-205ENST00000586477 KIF16BQ96L93 1317 aa20.52■□□□□ 0.87
ATG4D-205ENST00000586477 ZC3H4Q9UPT8 1303 aaKnown RBP20.52■□□□□ 0.87
ATG4D-205ENST00000586477 HSP90AB3PQ58FF7 597 aa20.51■□□□□ 0.87
ATG4D-205ENST00000586477 ANKRD13DQ6ZTN6 518 aa20.51■□□□□ 0.87
ATG4D-205ENST00000586477 C16orf71Q8IYS4 520 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-205ENST00000586477 TAOK3Q9H2K8 898 aa20.51■□□□□ 0.87
ATG4D-205ENST00000586477 SMC4Q9NTJ3 1288 aa20.51■□□□□ 0.87
ATG4D-205ENST00000586477 TAF1P21675 1872 aa20.51■□□□□ 0.87
ATG4D-205ENST00000586477 ALDH1B1P30837 517 aa20.5■□□□□ 0.87
ATG4D-205ENST00000586477 RARSP54136 660 aaKnown RBP20.5■□□□□ 0.87
ATG4D-205ENST00000586477 BRPF1P55201 1214 aaPredicted RBP20.5■□□□□ 0.87
ATG4D-205ENST00000586477 CCDC93Q567U6 631 aa20.5■□□□□ 0.87
ATG4D-205ENST00000586477 SOGA3Q5TF21 947 aa20.5■□□□□ 0.87
ATG4D-205ENST00000586477 SLC4A2P04920 1241 aa20.49■□□□□ 0.87
ATG4D-205ENST00000586477 RNF123Q5XPI4 1314 aa20.49■□□□□ 0.87
ATG4D-205ENST00000586477 ATP5J2-PTCD1G3V325 749 aa20.48■□□□□ 0.87
ATG4D-205ENST00000586477 DDX58O95786 925 aaKnown RBP20.48■□□□□ 0.87
ATG4D-205ENST00000586477 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
ATG4D-205ENST00000586477 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.48■□□□□ 0.87
ATG4D-205ENST00000586477 SSH1Q8WYL5 1049 aa20.48■□□□□ 0.87
ATG4D-205ENST00000586477 CRAMP1Q96RY5 1269 aa20.48■□□□□ 0.87
ATG4D-205ENST00000586477 COL4A1P02462 1669 aa20.48■□□□□ 0.87
ATG4D-205ENST00000586477 WDR90Q96KV7 1748 aa20.47■□□□□ 0.87
ATG4D-205ENST00000586477 GLTPD2A6NH11 291 aa20.47■□□□□ 0.87
ATG4D-205ENST00000586477 IPO8O15397 1037 aaKnown RBP20.47■□□□□ 0.87
ATG4D-205ENST00000586477 FKBP4Q02790 459 aaKnown RBP eCLIP20.47■□□□□ 0.87
ATG4D-205ENST00000586477 RPGRQ92834 1020 aaKnown RBP20.47■□□□□ 0.87
ATG4D-205ENST00000586477 RRAGCQ9HB90 399 aa20.47■□□□□ 0.87
ATG4D-205ENST00000586477 TRMT112Q9UI30 125 aaKnown RBP20.47■□□□□ 0.87
ATG4D-205ENST00000586477 COL4A5P29400 1685 aa20.47■□□□□ 0.87
ATG4D-205ENST00000586477 PTPRCP08575 1304 aa20.47■□□□□ 0.87
ATG4D-205ENST00000586477 POTECB2RU33 542 aa20.46■□□□□ 0.87
ATG4D-205ENST00000586477 NLRP3Q96P20 1036 aa20.46■□□□□ 0.87
ATG4D-205ENST00000586477 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
ATG4D-205ENST00000586477 TRIM28Q13263 835 aaKnown RBP20.45■□□□□ 0.86
ATG4D-205ENST00000586477 RBM46Q8TBY0 533 aaKnown RBP20.45■□□□□ 0.86
ATG4D-205ENST00000586477 RBM17Q96I25 401 aaKnown RBP20.45■□□□□ 0.86
ATG4D-205ENST00000586477 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
ATG4D-205ENST00000586477 ABCC4O15439 1325 aa20.45■□□□□ 0.86
ATG4D-205ENST00000586477 SH3TC1Q8TE82 1336 aa20.45■□□□□ 0.86
ATG4D-205ENST00000586477 APLP1P51693 650 aa20.44■□□□□ 0.86
ATG4D-205ENST00000586477 RTKN2Q8IZC4 609 aa20.44■□□□□ 0.86
ATG4D-205ENST00000586477 MRPL50Q8N5N7 158 aaKnown RBP20.44■□□□□ 0.86
ATG4D-205ENST00000586477 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
ATG4D-205ENST00000586477 FAM89AQ96GI7 184 aa20.44■□□□□ 0.86
ATG4D-205ENST00000586477 MS4A1P11836 297 aa20.43■□□□□ 0.86
ATG4D-205ENST00000586477 FLIIQ13045 1269 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms