RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 JDP2Q8WYK2 163 aa26.48■■□□□ 1.83
CLPTM1-204ENST00000585961 RNF123Q5XPI4 1314 aa26.47■■□□□ 1.83
CLPTM1-204ENST00000585961 GIGYF2Q6Y7W6 1299 aaKnown RBP26.47■■□□□ 1.83
CLPTM1-204ENST00000585961 ITGBL1O95965 494 aaPredicted RBP26.46■■□□□ 1.83
CLPTM1-204ENST00000585961 PROSER3Q2NL68 480 aa26.46■■□□□ 1.83
CLPTM1-204ENST00000585961 RBM17Q96I25 401 aaKnown RBP26.46■■□□□ 1.83
CLPTM1-204ENST00000585961 HOXA10P31260 410 aaPredicted RBP26.45■■□□□ 1.82
CLPTM1-204ENST00000585961 PDIA6Q15084 440 aa26.45■■□□□ 1.82
CLPTM1-204ENST00000585961 NEUROD2Q15784 382 aa26.45■■□□□ 1.82
CLPTM1-204ENST00000585961 MAP1SQ66K74 1059 aaPredicted RBP26.45■■□□□ 1.82
CLPTM1-204ENST00000585961 PSMD1Q99460 953 aa26.45■■□□□ 1.82
CLPTM1-204ENST00000585961 PASKQ96RG2 1323 aa26.44■■□□□ 1.82
CLPTM1-204ENST00000585961 NTSR2O95665 410 aa26.44■■□□□ 1.82
CLPTM1-204ENST00000585961 AIMP1Q12904 312 aaKnown RBP26.44■■□□□ 1.82
CLPTM1-204ENST00000585961 PPP1R42Q7Z4L9 355 aa26.44■■□□□ 1.82
CLPTM1-204ENST00000585961 ZNF428Q96B54 188 aa26.44■■□□□ 1.82
CLPTM1-204ENST00000585961 TMPOP42166 694 aaKnown RBP26.43■■□□□ 1.82
CLPTM1-204ENST00000585961 EIF6P56537 245 aaKnown RBP26.43■■□□□ 1.82
CLPTM1-204ENST00000585961 CC2D2BQ6DHV5 1058 aa26.43■■□□□ 1.82
CLPTM1-204ENST00000585961 CNTROBQ8N137 903 aa26.43■■□□□ 1.82
CLPTM1-204ENST00000585961 GPC2Q8N158 579 aa26.43■■□□□ 1.82
CLPTM1-204ENST00000585961 LARGE2Q8N3Y3 721 aa26.43■■□□□ 1.82
CLPTM1-204ENST00000585961 DLG5Q8TDM6 1919 aa26.43■■□□□ 1.82
CLPTM1-204ENST00000585961 TMEM88BA6NKF7 163 aa26.42■■□□□ 1.82
CLPTM1-204ENST00000585961 PPEF1O14829 653 aaPredicted RBP26.42■■□□□ 1.82
CLPTM1-204ENST00000585961 LRP10Q7Z4F1 713 aa26.42■■□□□ 1.82
CLPTM1-204ENST00000585961 CCDC146Q8IYE0 955 aa26.42■■□□□ 1.82
CLPTM1-204ENST00000585961 NLRP3Q96P20 1036 aa26.42■■□□□ 1.82
CLPTM1-204ENST00000585961 CRAMP1Q96RY5 1269 aa26.42■■□□□ 1.82
CLPTM1-204ENST00000585961 UTP14AQ9BVJ6 771 aaKnown RBP26.42■■□□□ 1.82
CLPTM1-204ENST00000585961 ARFGEF2Q9Y6D5 1785 aa26.41■■□□□ 1.82
CLPTM1-204ENST00000585961 LAS1LQ9Y4W2 734 aaKnown RBP26.41■■□□□ 1.82
CLPTM1-204ENST00000585961 VEGFBP49765 207 aa26.4■■□□□ 1.82
CLPTM1-204ENST00000585961 DDX10Q13206 875 aaKnown RBP26.4■■□□□ 1.82
CLPTM1-204ENST00000585961 COPS6Q7L5N1 327 aa26.4■■□□□ 1.82
CLPTM1-204ENST00000585961 PNMA8AQ86V59 439 aaPredicted RBP26.4■■□□□ 1.82
CLPTM1-204ENST00000585961 KRT24Q2M2I5 525 aa26.39■■□□□ 1.82
CLPTM1-204ENST00000585961 PARP10Q53GL7 1025 aa26.39■■□□□ 1.82
CLPTM1-204ENST00000585961 NUP98P52948 1817 aa26.39■■□□□ 1.81
CLPTM1-204ENST00000585961 ERBB4Q15303 1308 aa26.39■■□□□ 1.81
CLPTM1-204ENST00000585961 CNTNAP1P78357 1384 aa26.38■■□□□ 1.81
CLPTM1-204ENST00000585961 HCLS1P14317 486 aaPredicted RBP26.38■■□□□ 1.81
CLPTM1-204ENST00000585961 EPS15P42566 896 aa26.38■■□□□ 1.81
CLPTM1-204ENST00000585961 RALBP1Q15311 655 aa26.38■■□□□ 1.81
CLPTM1-204ENST00000585961 XAGE3Q8WTP9 111 aa26.38■■□□□ 1.81
CLPTM1-204ENST00000585961 KDM3BQ7LBC6 1761 aa26.38■■□□□ 1.81
CLPTM1-204ENST00000585961 FMR1Q06787 632 aaKnown RBP eCLIP26.37■■□□□ 1.81
CLPTM1-204ENST00000585961 SLC10A5Q5PT55 438 aa26.37■■□□□ 1.81
CLPTM1-204ENST00000585961 TMX4Q9H1E5 349 aaPredicted RBP26.37■■□□□ 1.81
CLPTM1-204ENST00000585961 FOXN1O15353 648 aa26.36■■□□□ 1.81
CLPTM1-204ENST00000585961 SNED1Q8TER0 1413 aa26.36■■□□□ 1.81
CLPTM1-204ENST00000585961 PPIP5K2O43314 1243 aa26.35■■□□□ 1.81
CLPTM1-204ENST00000585961 LMOD1P29536 600 aaPredicted RBP26.35■■□□□ 1.81
CLPTM1-204ENST00000585961 AOC3Q16853 763 aa26.35■■□□□ 1.81
CLPTM1-204ENST00000585961 LAMB4A4D0S4 1761 aa26.35■■□□□ 1.81
CLPTM1-204ENST00000585961 GRIPAP1Q4V328 841 aa26.34■■□□□ 1.81
CLPTM1-204ENST00000585961 NIM1KQ8IY84 436 aa26.34■■□□□ 1.81
CLPTM1-204ENST00000585961 ATP6V0A2Q9Y487 856 aa26.34■■□□□ 1.81
CLPTM1-204ENST00000585961 SCN4AP35499 1836 aa26.34■■□□□ 1.81
CLPTM1-204ENST00000585961 COL4A5P29400 1685 aa26.34■■□□□ 1.81
CLPTM1-204ENST00000585961 IBTKQ9P2D0 1353 aaPredicted RBP26.33■■□□□ 1.81
CLPTM1-204ENST00000585961 SCNN1DP51172 638 aa26.33■■□□□ 1.81
CLPTM1-204ENST00000585961 LMOD3Q0VAK6 560 aa26.33■■□□□ 1.81
CLPTM1-204ENST00000585961 DEFB115Q30KQ5 88 aa26.33■■□□□ 1.81
CLPTM1-204ENST00000585961 NLRP10Q86W26 655 aa26.33■■□□□ 1.81
CLPTM1-204ENST00000585961 BABAM1Q9NWV8 329 aa26.33■■□□□ 1.81
CLPTM1-204ENST00000585961 TCIRG1Q13488 830 aa26.32■■□□□ 1.8
CLPTM1-204ENST00000585961 TRMT112Q9UI30 125 aaKnown RBP26.32■■□□□ 1.8
CLPTM1-204ENST00000585961 ABT1Q9ULW3 272 aaKnown RBP26.32■■□□□ 1.8
CLPTM1-204ENST00000585961 ABCC4O15439 1325 aa26.32■■□□□ 1.8
CLPTM1-204ENST00000585961 CHL1O00533 1208 aa26.3■■□□□ 1.8
CLPTM1-204ENST00000585961 TRIM35Q9UPQ4 493 aa26.3■■□□□ 1.8
CLPTM1-204ENST00000585961 BBOX1O75936 387 aa26.29■■□□□ 1.8
CLPTM1-204ENST00000585961 HSP90AB3PQ58FF7 597 aa26.29■■□□□ 1.8
CLPTM1-204ENST00000585961 AIDAQ96BJ3 306 aa26.29■■□□□ 1.8
CLPTM1-204ENST00000585961 DDX21Q9NR30 783 aaKnown RBP eCLIP26.29■■□□□ 1.8
CLPTM1-204ENST00000585961 TRAF5O00463 557 aa26.28■■□□□ 1.8
CLPTM1-204ENST00000585961 CXCL9Q07325 125 aa26.28■■□□□ 1.8
CLPTM1-204ENST00000585961 DPP8Q6V1X1 898 aaPredicted RBP26.28■■□□□ 1.8
CLPTM1-204ENST00000585961 DDX46Q7L014 1031 aaKnown RBP26.28■■□□□ 1.8
CLPTM1-204ENST00000585961 SP8Q8IXZ3 490 aa26.28■■□□□ 1.8
CLPTM1-204ENST00000585961 MPNDQ8N594 471 aa26.28■■□□□ 1.8
CLPTM1-204ENST00000585961 CHPF2Q9P2E5 772 aa26.28■■□□□ 1.8
CLPTM1-204ENST00000585961 RIC1Q4ADV7 1423 aa26.28■■□□□ 1.8
CLPTM1-204ENST00000585961 RUNDC1Q96C34 613 aa26.27■■□□□ 1.8
CLPTM1-204ENST00000585961 ZNRF3Q9ULT6 936 aa26.27■■□□□ 1.8
CLPTM1-204ENST00000585961 ADAMTS8Q9UP79 889 aa26.27■■□□□ 1.8
CLPTM1-204ENST00000585961 GRM1Q13255 1194 aa26.26■■□□□ 1.79
CLPTM1-204ENST00000585961 WDR43Q15061 677 aaKnown RBP eCLIP26.26■■□□□ 1.79
CLPTM1-204ENST00000585961 USP50Q70EL3 339 aaPredicted RBP26.26■■□□□ 1.79
CLPTM1-204ENST00000585961 WBP1LQ9NX94 342 aa26.26■■□□□ 1.79
CLPTM1-204ENST00000585961 MYBBP1AQ9BQG0 1328 aaKnown RBP26.25■■□□□ 1.79
CLPTM1-204ENST00000585961 WDR33Q9C0J8 1336 aaKnown RBP26.25■■□□□ 1.79
CLPTM1-204ENST00000585961 RASSF10A6NK89 507 aa26.25■■□□□ 1.79
CLPTM1-204ENST00000585961 ATP5J2-PTCD1G3V325 749 aa26.25■■□□□ 1.79
CLPTM1-204ENST00000585961 RAD17O75943 681 aa26.25■■□□□ 1.79
CLPTM1-204ENST00000585961 CTCFP49711 727 aaPredicted RBP26.25■■□□□ 1.79
CLPTM1-204ENST00000585961 PAXIP1Q6ZW49 1069 aaPredicted RBP26.25■■□□□ 1.79
CLPTM1-204ENST00000585961 SUPT20HQ8NEM7 779 aa26.25■■□□□ 1.79
CLPTM1-204ENST00000585961 SH3TC1Q8TE82 1336 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms