RNA–Protein interactions for RNA: ENST00000584995.5

SLC46A1-206, Transcript of solute carrier family 46 member 1, humanhuman

TSL 3

Gene SLC46A1, Length 1,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-206ENST00000584995 DDX21Q9NR30 783 aaKnown RBP eCLIP22.43■■□□□ 1.18
SLC46A1-206ENST00000584995 PARP10Q53GL7 1025 aa22.42■■□□□ 1.18
SLC46A1-206ENST00000584995 HDGFL1Q5TGJ6 251 aa22.42■■□□□ 1.18
SLC46A1-206ENST00000584995 CFAP44Q96MT7 982 aa22.42■■□□□ 1.18
SLC46A1-206ENST00000584995 FER1L6Q2WGJ9 1857 aa22.41■■□□□ 1.18
SLC46A1-206ENST00000584995 CCDC88AQ3V6T2 1871 aa22.41■■□□□ 1.18
SLC46A1-206ENST00000584995 HOXA10P31260 410 aaPredicted RBP22.41■■□□□ 1.18
SLC46A1-206ENST00000584995 RBM17Q96I25 401 aaKnown RBP22.41■■□□□ 1.18
SLC46A1-206ENST00000584995 MBIPQ9NS73 344 aa22.41■■□□□ 1.18
SLC46A1-206ENST00000584995 CACNA1SQ13698 1873 aa22.41■■□□□ 1.18
SLC46A1-206ENST00000584995 TNRC6CQ9HCJ0 1690 aaKnown RBP22.4■■□□□ 1.18
SLC46A1-206ENST00000584995 CCDC184Q52MB2 194 aa22.4■■□□□ 1.18
SLC46A1-206ENST00000584995 NLRP3Q96P20 1036 aa22.4■■□□□ 1.18
SLC46A1-206ENST00000584995 NUP98P52948 1817 aa22.4■■□□□ 1.18
SLC46A1-206ENST00000584995 TIAM2Q8IVF5 1701 aa22.4■■□□□ 1.18
SLC46A1-206ENST00000584995 TCIRG1Q13488 830 aa22.39■■□□□ 1.17
SLC46A1-206ENST00000584995 DUSP27Q5VZP5 1158 aa22.39■■□□□ 1.17
SLC46A1-206ENST00000584995 NLRP10Q86W26 655 aa22.39■■□□□ 1.17
SLC46A1-206ENST00000584995 IBTKQ9P2D0 1353 aaPredicted RBP22.38■■□□□ 1.17
SLC46A1-206ENST00000584995 ELL2O00472 640 aaPredicted RBP22.38■■□□□ 1.17
SLC46A1-206ENST00000584995 HCLS1P14317 486 aaPredicted RBP22.38■■□□□ 1.17
SLC46A1-206ENST00000584995 IARSP41252 1262 aaKnown RBP22.38■■□□□ 1.17
SLC46A1-206ENST00000584995 HSP90AB3PQ58FF7 597 aa22.38■■□□□ 1.17
SLC46A1-206ENST00000584995 ZNF541Q9H0D2 1346 aa22.37■■□□□ 1.17
SLC46A1-206ENST00000584995 PPEF1O14829 653 aaPredicted RBP22.37■■□□□ 1.17
SLC46A1-206ENST00000584995 POTEIP0CG38 1075 aa22.37■■□□□ 1.17
SLC46A1-206ENST00000584995 POTEJP0CG39 1038 aa22.37■■□□□ 1.17
SLC46A1-206ENST00000584995 SLC10A5Q5PT55 438 aa22.37■■□□□ 1.17
SLC46A1-206ENST00000584995 CRAMP1Q96RY5 1269 aa22.37■■□□□ 1.17
SLC46A1-206ENST00000584995 TRMT112Q9UI30 125 aaKnown RBP22.37■■□□□ 1.17
SLC46A1-206ENST00000584995 ZNF853P0CG23 659 aa22.35■■□□□ 1.17
SLC46A1-206ENST00000584995 ANKRD13DQ6ZTN6 518 aa22.35■■□□□ 1.17
SLC46A1-206ENST00000584995 DBF4Q9UBU7 674 aaPredicted RBP22.35■■□□□ 1.17
SLC46A1-206ENST00000584995 ATP5J2-PTCD1G3V325 749 aa22.34■■□□□ 1.17
SLC46A1-206ENST00000584995 HOXB7P09629 217 aa22.34■■□□□ 1.17
SLC46A1-206ENST00000584995 CC2D2BQ6DHV5 1058 aa22.34■■□□□ 1.17
SLC46A1-206ENST00000584995 PSMD1Q99460 953 aa22.34■■□□□ 1.17
SLC46A1-206ENST00000584995 ARFGEF2Q9Y6D5 1785 aa22.34■■□□□ 1.17
SLC46A1-206ENST00000584995 ZEB1P37275 1124 aaPredicted RBP22.33■■□□□ 1.17
SLC46A1-206ENST00000584995 GNAI1P63096 354 aa22.33■■□□□ 1.17
SLC46A1-206ENST00000584995 PLBD2Q8NHP8 589 aa22.33■■□□□ 1.17
SLC46A1-206ENST00000584995 JDP2Q8WYK2 163 aa22.33■■□□□ 1.17
SLC46A1-206ENST00000584995 IFT57Q9NWB7 429 aa22.33■■□□□ 1.17
SLC46A1-206ENST00000584995 RIC1Q4ADV7 1423 aa22.32■■□□□ 1.16
SLC46A1-206ENST00000584995 WDR90Q96KV7 1748 aa22.32■■□□□ 1.16
SLC46A1-206ENST00000584995 FZD9O00144 591 aa22.32■■□□□ 1.16
SLC46A1-206ENST00000584995 KLRG1Q96E93 195 aa22.32■■□□□ 1.16
SLC46A1-206ENST00000584995 HYPKQ9NX55 129 aa22.32■■□□□ 1.16
SLC46A1-206ENST00000584995 ABCC4O15439 1325 aa22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 SH3TC1Q8TE82 1336 aa22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 IQCA1LA6NCM1 817 aa22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 CALD1Q05682 793 aaKnown RBP22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 RTL5Q5HYW3 569 aaPredicted RBP22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 CHADLQ6NUI6 762 aa22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 LARGE2Q8N3Y3 721 aa22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 C8orf58Q8NAV2 365 aa22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 TMX4Q9H1E5 349 aaPredicted RBP22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 TAF1DQ9H5J8 278 aaPredicted RBP22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 GJA3Q9Y6H8 435 aa22.31■■□□□ 1.16
SLC46A1-206ENST00000584995 DICER1Q9UPY3 1922 aaKnown RBP22.3■■□□□ 1.16
SLC46A1-206ENST00000584995 EAPPQ56P03 285 aaPredicted RBP22.3■■□□□ 1.16
SLC46A1-206ENST00000584995 FAM89AQ96GI7 184 aa22.3■■□□□ 1.16
SLC46A1-206ENST00000584995 L3MBTL3Q96JM7 780 aaPredicted RBP22.3■■□□□ 1.16
SLC46A1-206ENST00000584995 PHAXQ9H814 394 aaKnown RBP22.3■■□□□ 1.16
SLC46A1-206ENST00000584995 ATP6V0A2Q9Y487 856 aa22.3■■□□□ 1.16
SLC46A1-206ENST00000584995 SNED1Q8TER0 1413 aa22.3■■□□□ 1.16
SLC46A1-206ENST00000584995 DDX46Q7L014 1031 aaKnown RBP22.29■■□□□ 1.16
SLC46A1-206ENST00000584995 ISCA1Q9BUE6 129 aa22.29■■□□□ 1.16
SLC46A1-206ENST00000584995 CLEC11AQ9Y240 323 aa22.29■■□□□ 1.16
SLC46A1-206ENST00000584995 RNF123Q5XPI4 1314 aa22.29■■□□□ 1.16
SLC46A1-206ENST00000584995 RIC3Q7Z5B4 369 aa22.28■■□□□ 1.16
SLC46A1-206ENST00000584995 HACL1Q9UJ83 578 aa22.28■■□□□ 1.16
SLC46A1-206ENST00000584995 ZNF316A6NFI3 1004 aaPredicted RBP22.27■■□□□ 1.16
SLC46A1-206ENST00000584995 BBOX1O75936 387 aa22.27■■□□□ 1.16
SLC46A1-206ENST00000584995 EIF6P56537 245 aaKnown RBP22.27■■□□□ 1.16
SLC46A1-206ENST00000584995 GRIPAP1Q4V328 841 aa22.27■■□□□ 1.16
SLC46A1-206ENST00000584995 PPIP5K2O43314 1243 aa22.26■■□□□ 1.15
SLC46A1-206ENST00000584995 EPHX2P34913 555 aa22.26■■□□□ 1.15
SLC46A1-206ENST00000584995 AOC3Q16853 763 aa22.26■■□□□ 1.15
SLC46A1-206ENST00000584995 GPC2Q8N158 579 aa22.26■■□□□ 1.15
SLC46A1-206ENST00000584995 TSR2Q969E8 191 aaKnown RBP22.26■■□□□ 1.15
SLC46A1-206ENST00000584995 LDHDQ86WU2 507 aa22.25■■□□□ 1.15
SLC46A1-206ENST00000584995 SP8Q8IXZ3 490 aa22.25■■□□□ 1.15
SLC46A1-206ENST00000584995 TSPYL6Q8N831 410 aa22.25■■□□□ 1.15
SLC46A1-206ENST00000584995 MRS2Q9HD23 443 aa22.25■■□□□ 1.15
SLC46A1-206ENST00000584995 COL4A5P29400 1685 aa22.25■■□□□ 1.15
SLC46A1-206ENST00000584995 GOLGA2Q08379 1002 aa22.24■■□□□ 1.15
SLC46A1-206ENST00000584995 GRAPQ13588 217 aa22.24■■□□□ 1.15
SLC46A1-206ENST00000584995 DPP8Q6V1X1 898 aaPredicted RBP22.24■■□□□ 1.15
SLC46A1-206ENST00000584995 NIM1KQ8IY84 436 aa22.24■■□□□ 1.15
SLC46A1-206ENST00000584995 GRAPLQ8TC17 118 aaPredicted RBP22.24■■□□□ 1.15
SLC46A1-206ENST00000584995 ANP32CO43423 234 aa22.23■■□□□ 1.15
SLC46A1-206ENST00000584995 MPNDQ8N594 471 aa22.23■■□□□ 1.15
SLC46A1-206ENST00000584995 JARID2Q92833 1246 aaPredicted RBP22.23■■□□□ 1.15
SLC46A1-206ENST00000584995 MYD88Q99836 296 aa22.23■■□□□ 1.15
SLC46A1-206ENST00000584995 SALL2Q9Y467 1007 aaPredicted RBP22.23■■□□□ 1.15
SLC46A1-206ENST00000584995 IRS4O14654 1257 aaPredicted RBP22.22■■□□□ 1.15
SLC46A1-206ENST00000584995 JMYQ8N9B5 988 aa22.22■■□□□ 1.15
SLC46A1-206ENST00000584995 CCDC30Q5VVM6 783 aa22.21■■□□□ 1.15
SLC46A1-206ENST00000584995 MAP1SQ66K74 1059 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms