RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 GIGYF2Q6Y7W6 1299 aaKnown RBP23.21■■□□□ 1.31
ERBB2-221ENST00000584888 ZNF34Q8IZ26 560 aa23.21■■□□□ 1.31
ERBB2-221ENST00000584888 UBN2Q6ZU65 1347 aa23.21■■□□□ 1.31
ERBB2-221ENST00000584888 FKBP4Q02790 459 aaKnown RBP eCLIP23.2■■□□□ 1.3
ERBB2-221ENST00000584888 RTKN2Q8IZC4 609 aa23.2■■□□□ 1.3
ERBB2-221ENST00000584888 DDNO94850 711 aaPredicted RBP23.19■■□□□ 1.3
ERBB2-221ENST00000584888 ANXA1P04083 346 aa23.19■■□□□ 1.3
ERBB2-221ENST00000584888 WDR90Q96KV7 1748 aa23.19■■□□□ 1.3
ERBB2-221ENST00000584888 IBTKQ9P2D0 1353 aaPredicted RBP23.18■■□□□ 1.3
ERBB2-221ENST00000584888 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
ERBB2-221ENST00000584888 DDX21Q9NR30 783 aaKnown RBP eCLIP23.18■■□□□ 1.3
ERBB2-221ENST00000584888 ZNF277Q9NRM2 450 aaPredicted RBP23.18■■□□□ 1.3
ERBB2-221ENST00000584888 DUSP27Q5VZP5 1158 aa23.17■■□□□ 1.3
ERBB2-221ENST00000584888 NTSR2O95665 410 aa23.16■■□□□ 1.3
ERBB2-221ENST00000584888 HOXA10P31260 410 aaPredicted RBP23.16■■□□□ 1.3
ERBB2-221ENST00000584888 PPP1R42Q7Z4L9 355 aa23.16■■□□□ 1.3
ERBB2-221ENST00000584888 NECTIN2Q92692 538 aa23.16■■□□□ 1.3
ERBB2-221ENST00000584888 RPGRQ92834 1020 aaKnown RBP23.16■■□□□ 1.3
ERBB2-221ENST00000584888 KLRG1Q96E93 195 aa23.16■■□□□ 1.3
ERBB2-221ENST00000584888 PARP10Q53GL7 1025 aa23.15■■□□□ 1.3
ERBB2-221ENST00000584888 SYNE4Q8N205 404 aa23.15■■□□□ 1.3
ERBB2-221ENST00000584888 RIC1Q4ADV7 1423 aa23.15■■□□□ 1.3
ERBB2-221ENST00000584888 HDGFL1Q5TGJ6 251 aa23.14■■□□□ 1.29
ERBB2-221ENST00000584888 COPS6Q7L5N1 327 aa23.14■■□□□ 1.29
ERBB2-221ENST00000584888 IL16Q14005 1332 aa23.13■■□□□ 1.29
ERBB2-221ENST00000584888 AIMP1Q12904 312 aaKnown RBP23.13■■□□□ 1.29
ERBB2-221ENST00000584888 C8orf58Q8NAV2 365 aa23.13■■□□□ 1.29
ERBB2-221ENST00000584888 XAGE3Q8WTP9 111 aa23.13■■□□□ 1.29
ERBB2-221ENST00000584888 CHPF2Q9P2E5 772 aa23.13■■□□□ 1.29
ERBB2-221ENST00000584888 IARSP41252 1262 aaKnown RBP23.12■■□□□ 1.29
ERBB2-221ENST00000584888 CC2D2BQ6DHV5 1058 aa23.12■■□□□ 1.29
ERBB2-221ENST00000584888 C3orf67Q6ZVT6 689 aa23.12■■□□□ 1.29
ERBB2-221ENST00000584888 RBM17Q96I25 401 aaKnown RBP23.12■■□□□ 1.29
ERBB2-221ENST00000584888 CRAMP1Q96RY5 1269 aa23.12■■□□□ 1.29
ERBB2-221ENST00000584888 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
ERBB2-221ENST00000584888 SNED1Q8TER0 1413 aa23.11■■□□□ 1.29
ERBB2-221ENST00000584888 SLC10A5Q5PT55 438 aa23.11■■□□□ 1.29
ERBB2-221ENST00000584888 L3MBTL3Q96JM7 780 aaPredicted RBP23.11■■□□□ 1.29
ERBB2-221ENST00000584888 PSMD1Q99460 953 aa23.11■■□□□ 1.29
ERBB2-221ENST00000584888 DBF4Q9UBU7 674 aaPredicted RBP23.11■■□□□ 1.29
ERBB2-221ENST00000584888 ZNF541Q9H0D2 1346 aa23.1■■□□□ 1.29
ERBB2-221ENST00000584888 IQCA1LA6NCM1 817 aa23.1■■□□□ 1.29
ERBB2-221ENST00000584888 FAM9BQ8IZU0 186 aa23.1■■□□□ 1.29
ERBB2-221ENST00000584888 NLRP3Q96P20 1036 aa23.1■■□□□ 1.29
ERBB2-221ENST00000584888 ANKRD36CQ5JPF3 1778 aa23.09■■□□□ 1.29
ERBB2-221ENST00000584888 POTEIP0CG38 1075 aa23.09■■□□□ 1.29
ERBB2-221ENST00000584888 POTEJP0CG39 1038 aa23.09■■□□□ 1.29
ERBB2-221ENST00000584888 HSP90AB3PQ58FF7 597 aa23.09■■□□□ 1.29
ERBB2-221ENST00000584888 CHADLQ6NUI6 762 aa23.09■■□□□ 1.29
ERBB2-221ENST00000584888 JMYQ8N9B5 988 aa23.09■■□□□ 1.29
ERBB2-221ENST00000584888 FZD9O00144 591 aa23.08■■□□□ 1.29
ERBB2-221ENST00000584888 TCIRG1Q13488 830 aa23.08■■□□□ 1.29
ERBB2-221ENST00000584888 IFFO2Q5TF58 517 aa23.08■■□□□ 1.29
ERBB2-221ENST00000584888 WDR63Q8IWG1 891 aa23.08■■□□□ 1.29
ERBB2-221ENST00000584888 TSPYL6Q8N831 410 aa23.08■■□□□ 1.29
ERBB2-221ENST00000584888 TSR2Q969E8 191 aaKnown RBP23.08■■□□□ 1.29
ERBB2-221ENST00000584888 TAF1DQ9H5J8 278 aaPredicted RBP23.08■■□□□ 1.29
ERBB2-221ENST00000584888 HYPKQ9NX55 129 aa23.08■■□□□ 1.29
ERBB2-221ENST00000584888 ELL2O00472 640 aaPredicted RBP23.07■■□□□ 1.28
ERBB2-221ENST00000584888 TCERG1O14776 1098 aaKnown RBP23.07■■□□□ 1.28
ERBB2-221ENST00000584888 PPEF1O14829 653 aaPredicted RBP23.07■■□□□ 1.28
ERBB2-221ENST00000584888 GRIPAP1Q4V328 841 aa23.07■■□□□ 1.28
ERBB2-221ENST00000584888 NLRP10Q86W26 655 aa23.07■■□□□ 1.28
ERBB2-221ENST00000584888 SLC51AQ86UW1 340 aa23.06■■□□□ 1.28
ERBB2-221ENST00000584888 JDP2Q8WYK2 163 aa23.06■■□□□ 1.28
ERBB2-221ENST00000584888 RNF123Q5XPI4 1314 aa23.06■■□□□ 1.28
ERBB2-221ENST00000584888 PLBD2Q8NHP8 589 aa23.05■■□□□ 1.28
ERBB2-221ENST00000584888 HCLS1P14317 486 aaPredicted RBP23.04■■□□□ 1.28
ERBB2-221ENST00000584888 ANKRD13DQ6ZTN6 518 aa23.04■■□□□ 1.28
ERBB2-221ENST00000584888 LDHDQ86WU2 507 aa23.04■■□□□ 1.28
ERBB2-221ENST00000584888 TRMT112Q9UI30 125 aaKnown RBP23.04■■□□□ 1.28
ERBB2-221ENST00000584888 HACL1Q9UJ83 578 aa23.04■■□□□ 1.28
ERBB2-221ENST00000584888 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
ERBB2-221ENST00000584888 GPC2Q8N158 579 aa23.03■■□□□ 1.28
ERBB2-221ENST00000584888 ATP6V0A2Q9Y487 856 aa23.03■■□□□ 1.28
ERBB2-221ENST00000584888 SCN4AP35499 1836 aa23.03■■□□□ 1.28
ERBB2-221ENST00000584888 LARGE2Q8N3Y3 721 aa23.02■■□□□ 1.28
ERBB2-221ENST00000584888 CHMP4AQ9BY43 222 aa23.02■■□□□ 1.28
ERBB2-221ENST00000584888 TMX4Q9H1E5 349 aaPredicted RBP23.02■■□□□ 1.28
ERBB2-221ENST00000584888 SH3TC1Q8TE82 1336 aa23.02■■□□□ 1.28
ERBB2-221ENST00000584888 EPHX2P34913 555 aa23.01■■□□□ 1.27
ERBB2-221ENST00000584888 EIF6P56537 245 aaKnown RBP23.01■■□□□ 1.27
ERBB2-221ENST00000584888 EAPPQ56P03 285 aaPredicted RBP23.01■■□□□ 1.27
ERBB2-221ENST00000584888 CCDC30Q5VVM6 783 aa23.01■■□□□ 1.27
ERBB2-221ENST00000584888 ISCA1Q9BUE6 129 aa23.01■■□□□ 1.27
ERBB2-221ENST00000584888 PHAXQ9H814 394 aaKnown RBP23.01■■□□□ 1.27
ERBB2-221ENST00000584888 SPINK5Q9NQ38 1064 aaPredicted RBP23.01■■□□□ 1.27
ERBB2-221ENST00000584888 ABCC4O15439 1325 aa23.01■■□□□ 1.27
ERBB2-221ENST00000584888 COL4A5P29400 1685 aa23■■□□□ 1.27
ERBB2-221ENST00000584888 CCER2I3L3R5 266 aa23■■□□□ 1.27
ERBB2-221ENST00000584888 BBOX1O75936 387 aa23■■□□□ 1.27
ERBB2-221ENST00000584888 ZNF428Q96B54 188 aa23■■□□□ 1.27
ERBB2-221ENST00000584888 ZNF521Q96K83 1311 aa23■■□□□ 1.27
ERBB2-221ENST00000584888 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
ERBB2-221ENST00000584888 TRIM28Q13263 835 aaKnown RBP22.99■■□□□ 1.27
ERBB2-221ENST00000584888 CREBZFQ9NS37 354 aa22.99■■□□□ 1.27
ERBB2-221ENST00000584888 GJA3Q9Y6H8 435 aa22.99■■□□□ 1.27
ERBB2-221ENST00000584888 CACNA1FO60840 1977 aa22.98■■□□□ 1.27
ERBB2-221ENST00000584888 TWISTNBQ3B726 338 aaPredicted RBP22.98■■□□□ 1.27
ERBB2-221ENST00000584888 PNMA8AQ86V59 439 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms