RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 C16orf71Q8IYS4 520 aaPredicted RBP15.22■□□□□ 0.03
ITGB4-212ENST00000584558 TMX3Q96JJ7 454 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 KCNF1Q9H3M0 494 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 SPG7Q9UQ90 795 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 EP400Q96L91 3159 aa15.21■□□□□ 0.03
ITGB4-212ENST00000584558 GIGYF1O75420 1035 aaPredicted RBP15.21■□□□□ 0.03
ITGB4-212ENST00000584558 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
ITGB4-212ENST00000584558 CHPF2Q9P2E5 772 aa15.21■□□□□ 0.03
ITGB4-212ENST00000584558 CASC1Q6TDU7 716 aa15.21■□□□□ 0.02
ITGB4-212ENST00000584558 CSB-PGBD3P0DP91 1061 aa15.2■□□□□ 0.02
ITGB4-212ENST00000584558 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
ITGB4-212ENST00000584558 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
ITGB4-212ENST00000584558 SHANK3Q9BYB0 1731 aa15.2■□□□□ 0.02
ITGB4-212ENST00000584558 KDM4AO75164 1064 aa15.2■□□□□ 0.02
ITGB4-212ENST00000584558 NAA30Q147X3 362 aaPredicted RBP15.2■□□□□ 0.02
ITGB4-212ENST00000584558 TIGD1Q96MW7 591 aa15.2■□□□□ 0.02
ITGB4-212ENST00000584558 SLC52A2Q9HAB3 445 aa15.2■□□□□ 0.02
ITGB4-212ENST00000584558 GLI3P10071 1580 aa15.2■□□□□ 0.02
ITGB4-212ENST00000584558 WDR17Q8IZU2 1322 aa15.2■□□□□ 0.02
ITGB4-212ENST00000584558 APBB1O00213 710 aa15.19■□□□□ 0.02
ITGB4-212ENST00000584558 CYP27B1O15528 508 aa15.19■□□□□ 0.02
ITGB4-212ENST00000584558 EIF2S2P20042 333 aaKnown RBP15.19■□□□□ 0.02
ITGB4-212ENST00000584558 IFNL2Q8IZJ0 200 aa15.19■□□□□ 0.02
ITGB4-212ENST00000584558 DDX41Q9UJV9 622 aaKnown RBP15.19■□□□□ 0.02
ITGB4-212ENST00000584558 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
ITGB4-212ENST00000584558 ADCY9O60503 1353 aa15.18■□□□□ 0.02
ITGB4-212ENST00000584558 GNAI2P04899 355 aa15.18■□□□□ 0.02
ITGB4-212ENST00000584558 SDSP20132 328 aa15.18■□□□□ 0.02
ITGB4-212ENST00000584558 TERF2Q15554 542 aa15.18■□□□□ 0.02
ITGB4-212ENST00000584558 CCDC183Q5T5S1 534 aa15.18■□□□□ 0.02
ITGB4-212ENST00000584558 C16orf45Q96MC5 204 aaPredicted RBP15.18■□□□□ 0.02
ITGB4-212ENST00000584558 PRAMEF22A3QJZ6 481 aa15.18■□□□□ 0.02
ITGB4-212ENST00000584558 DNAJC2Q99543 621 aaKnown RBP15.18■□□□□ 0.02
ITGB4-212ENST00000584558 USP44Q9H0E7 712 aa15.18■□□□□ 0.02
ITGB4-212ENST00000584558 REC8O95072 547 aa15.17■□□□□ 0.02
ITGB4-212ENST00000584558 GNAI3P08754 354 aa15.17■□□□□ 0.02
ITGB4-212ENST00000584558 TRERF1Q96PN7 1200 aa15.17■□□□□ 0.02
ITGB4-212ENST00000584558 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
ITGB4-212ENST00000584558 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
ITGB4-212ENST00000584558 ZNF790Q6PG37 636 aa15.16■□□□□ 0.02
ITGB4-212ENST00000584558 DCAF5Q96JK2 942 aa15.16■□□□□ 0.02
ITGB4-212ENST00000584558 AP5Z1O43299 807 aa15.16■□□□□ 0.02
ITGB4-212ENST00000584558 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
ITGB4-212ENST00000584558 TCHHQ07283 1943 aa15.15■□□□□ 0.02
ITGB4-212ENST00000584558 PROSER3Q2NL68 480 aa15.15■□□□□ 0.02
ITGB4-212ENST00000584558 GOLGA6L6A8MZA4 724 aa15.15■□□□□ 0.02
ITGB4-212ENST00000584558 ANXA1P04083 346 aa15.15■□□□□ 0.02
ITGB4-212ENST00000584558 KIF18AQ8NI77 898 aa15.15■□□□□ 0.02
ITGB4-212ENST00000584558 AHDC1Q5TGY3 1603 aaPredicted RBP15.15■□□□□ 0.02
ITGB4-212ENST00000584558 COL22A1Q8NFW1 1626 aaPredicted RBP15.15■□□□□ 0.02
ITGB4-212ENST00000584558 HMMRO75330 724 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 ATP8B2P98198 1209 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 PDIA6Q15084 440 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 NFATC2IPQ8NCF5 419 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 PAPPAQ13219 1627 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 MX1P20591 662 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 PTGS1P23219 599 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 GIMAP6Q6P9H5 292 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 KRT222Q8N1A0 295 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 DNAAF4Q8WXU2 420 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 MORC2Q9Y6X9 1032 aaPredicted RBP15.14■□□□□ 0.01
ITGB4-212ENST00000584558 PI4KAP2A4QPH2 592 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 ERC2O15083 957 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 TPM3P06753 285 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 SLC39A6Q13433 755 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 PI4KAP1Q8N8J0 262 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 SRCIN1Q9C0H9 1055 aa15.14■□□□□ 0.01
ITGB4-212ENST00000584558 LAMB4A4D0S4 1761 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 UBR2Q8IWV8 1755 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 PNMA6EA0A0J9YXQ4 647 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 TRIM6-TRIM34B2RNG4 842 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 STRN4Q9NRL3 753 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 CNPY2Q9Y2B0 182 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 SMTNL1A8MU46 457 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 CARD10Q9BWT7 1032 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 LRRFIP2Q9Y608 721 aaKnown RBP15.13■□□□□ 0.01
ITGB4-212ENST00000584558 TUBGCP6Q96RT7 1819 aa15.13■□□□□ 0.01
ITGB4-212ENST00000584558 CCDC112Q8NEF3 446 aa15.12■□□□□ 0.01
ITGB4-212ENST00000584558 CALCOCO1Q9P1Z2 691 aa15.12■□□□□ 0.01
ITGB4-212ENST00000584558 TNNT1P13805 278 aa15.12■□□□□ 0.01
ITGB4-212ENST00000584558 CAPN2P17655 700 aa15.12■□□□□ 0.01
ITGB4-212ENST00000584558 SYCP1Q15431 976 aa15.11■□□□□ 0.01
ITGB4-212ENST00000584558 TOM1L2Q6ZVM7 507 aa15.11■□□□□ 0.01
ITGB4-212ENST00000584558 ZNF592Q92610 1267 aa15.11■□□□□ 0.01
ITGB4-212ENST00000584558 DDX21Q9NR30 783 aaKnown RBP eCLIP15.11■□□□□ 0.01
ITGB4-212ENST00000584558 HYPKQ9NX55 129 aa15.11■□□□□ 0.01
ITGB4-212ENST00000584558 ZNF496Q96IT1 587 aaPredicted RBP15.11■□□□□ 0.01
ITGB4-212ENST00000584558 COL16A1Q07092 1604 aaPredicted RBP15.11■□□□□ 0.01
ITGB4-212ENST00000584558 PCDH11XQ9BZA7 1347 aa15.11■□□□□ 0.01
ITGB4-212ENST00000584558 PCDH11YQ9BZA8 1340 aa15.11■□□□□ 0.01
ITGB4-212ENST00000584558 UBTFL1P0CB47 393 aaPredicted RBP15.1■□□□□ 0.01
ITGB4-212ENST00000584558 LRMPQ12912 555 aa15.1■□□□□ 0.01
ITGB4-212ENST00000584558 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
ITGB4-212ENST00000584558 KSR2Q6VAB6 950 aa15.1■□□□□ 0.01
ITGB4-212ENST00000584558 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.1■□□□□ 0.01
ITGB4-212ENST00000584558 V9GYY5 206 aaPredicted RBP15.1■□□□□ 0.01
ITGB4-212ENST00000584558 COL14A1Q05707 1796 aaKnown RBP15.1■□□□□ 0.01
ITGB4-212ENST00000584558 SALL3Q9BXA9 1300 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms