RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 IARSP41252 1262 aaKnown RBP15□□□□□ -0.01
CCDC47-206ENST00000584112 LAMA3Q16787 3333 aa14.99□□□□□ -0.01
CCDC47-206ENST00000584112 SPTBN5Q9NRC6 3674 aaKnown RBP14.99□□□□□ -0.01
CCDC47-206ENST00000584112 DIAPH1O60610 1272 aaKnown RBP14.99□□□□□ -0.01
CCDC47-206ENST00000584112 STYK1Q6J9G0 422 aa14.99□□□□□ -0.01
CCDC47-206ENST00000584112 PRR5LQ6MZQ0 368 aa14.99□□□□□ -0.01
CCDC47-206ENST00000584112 RGMBQ6NW40 437 aa14.99□□□□□ -0.01
CCDC47-206ENST00000584112 SRGNP10124 158 aa14.98□□□□□ -0.01
CCDC47-206ENST00000584112 PRDM6Q9NQX0 595 aa14.98□□□□□ -0.01
CCDC47-206ENST00000584112 RAPGEFL1Q9UHV5 662 aa14.98□□□□□ -0.01
CCDC47-206ENST00000584112 PDZRN3Q9UPQ7 1066 aa14.98□□□□□ -0.01
CCDC47-206ENST00000584112 RBBP6Q7Z6E9 1792 aaKnown RBP14.98□□□□□ -0.01
CCDC47-206ENST00000584112 COL3A1P02461 1466 aaPredicted RBP14.97□□□□□ -0.01
CCDC47-206ENST00000584112 TBC1D8O95759 1140 aa14.97□□□□□ -0.01
CCDC47-206ENST00000584112 MRC1P22897 1456 aa14.96□□□□□ -0.01
CCDC47-206ENST00000584112 HMOX1P09601 288 aa14.96□□□□□ -0.01
CCDC47-206ENST00000584112 EIF6P56537 245 aaKnown RBP14.96□□□□□ -0.01
CCDC47-206ENST00000584112 TBC1D9BQ66K14 1250 aa14.96□□□□□ -0.01
CCDC47-206ENST00000584112 PPP4R3CPQ6ZMV5 832 aa14.96□□□□□ -0.01
CCDC47-206ENST00000584112 COL15A1P39059 1388 aa14.96□□□□□ -0.02
CCDC47-206ENST00000584112 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.02
CCDC47-206ENST00000584112 UBR2Q8IWV8 1755 aa14.96□□□□□ -0.02
CCDC47-206ENST00000584112 SOX1O00570 391 aaPredicted RBP14.95□□□□□ -0.02
CCDC47-206ENST00000584112 ZNF157P51786 506 aaPredicted RBP14.95□□□□□ -0.02
CCDC47-206ENST00000584112 DNAJC10Q8IXB1 793 aa14.95□□□□□ -0.02
CCDC47-206ENST00000584112 NFATC2IPQ8NCF5 419 aa14.95□□□□□ -0.02
CCDC47-206ENST00000584112 COL9A1P20849 921 aa14.94□□□□□ -0.02
CCDC47-206ENST00000584112 CNGB1Q14028 1251 aaPredicted RBP14.94□□□□□ -0.02
CCDC47-206ENST00000584112 CCDC102AQ96A19 550 aa14.94□□□□□ -0.02
CCDC47-206ENST00000584112 MASTLQ96GX5 879 aa14.94□□□□□ -0.02
CCDC47-206ENST00000584112 LRCH3Q96II8 777 aa14.94□□□□□ -0.02
CCDC47-206ENST00000584112 JDP2Q8WYK2 163 aa14.93□□□□□ -0.02
CCDC47-206ENST00000584112 ADARB2Q9NS39 739 aaKnown RBP14.93□□□□□ -0.02
CCDC47-206ENST00000584112 USP48Q86UV5 1035 aa14.92□□□□□ -0.02
CCDC47-206ENST00000584112 CFAP53Q96M91 514 aa14.92□□□□□ -0.02
CCDC47-206ENST00000584112 SLC52A2Q9HAB3 445 aa14.92□□□□□ -0.02
CCDC47-206ENST00000584112 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
CCDC47-206ENST00000584112 RNMTO43148 476 aaKnown RBP14.91□□□□□ -0.02
CCDC47-206ENST00000584112 SLC10A3P09131 477 aa14.91□□□□□ -0.02
CCDC47-206ENST00000584112 HIRAP54198 1017 aaPredicted RBP14.91□□□□□ -0.02
CCDC47-206ENST00000584112 MTHFSDQ2M296 383 aaKnown RBP14.91□□□□□ -0.02
CCDC47-206ENST00000584112 GPRC5DQ9NZD1 345 aa14.91□□□□□ -0.02
CCDC47-206ENST00000584112 PGAP2Q9UHJ9 254 aa14.91□□□□□ -0.02
CCDC47-206ENST00000584112 ZBTB1Q9Y2K1 713 aa14.91□□□□□ -0.02
CCDC47-206ENST00000584112 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
CCDC47-206ENST00000584112 GBA2Q9HCG7 927 aaPredicted RBP14.9□□□□□ -0.02
CCDC47-206ENST00000584112 POLR2AP24928 1970 aaKnown RBP14.9□□□□□ -0.02
CCDC47-206ENST00000584112 LAMB4A4D0S4 1761 aa14.89□□□□□ -0.03
CCDC47-206ENST00000584112 GPR25O00155 361 aa14.89□□□□□ -0.03
CCDC47-206ENST00000584112 CYP19A1P11511 503 aaPredicted RBP14.89□□□□□ -0.03
CCDC47-206ENST00000584112 CDC37L1Q7L3B6 337 aa14.89□□□□□ -0.03
CCDC47-206ENST00000584112 RTKN2Q8IZC4 609 aa14.89□□□□□ -0.03
CCDC47-206ENST00000584112 GAS2L2Q8NHY3 880 aa14.89□□□□□ -0.03
CCDC47-206ENST00000584112 DLG5Q8TDM6 1919 aa14.89□□□□□ -0.03
CCDC47-206ENST00000584112 INTS3Q68E01 1043 aaKnown RBP14.88□□□□□ -0.03
CCDC47-206ENST00000584112 TRPM4Q8TD43 1214 aa14.88□□□□□ -0.03
CCDC47-206ENST00000584112 NUDCQ9Y266 331 aa14.88□□□□□ -0.03
CCDC47-206ENST00000584112 CNBD1Q8NA66 436 aa14.87□□□□□ -0.03
CCDC47-206ENST00000584112 TTC28Q96AY4 2481 aa14.87□□□□□ -0.03
CCDC47-206ENST00000584112 GNAT3A8MTJ3 354 aa14.86□□□□□ -0.03
CCDC47-206ENST00000584112 NPHP1O15259 732 aa14.86□□□□□ -0.03
CCDC47-206ENST00000584112 C2orf69Q8N8R5 385 aa14.86□□□□□ -0.03
CCDC47-206ENST00000584112 PRO3102Q9H379 93 aa14.86□□□□□ -0.03
CCDC47-206ENST00000584112 R3HDMLQ9H3Y0 253 aa14.86□□□□□ -0.03
CCDC47-206ENST00000584112 SNED1Q8TER0 1413 aa14.85□□□□□ -0.03
CCDC47-206ENST00000584112 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
CCDC47-206ENST00000584112 SLC51AQ86UW1 340 aa14.85□□□□□ -0.03
CCDC47-206ENST00000584112 RASAL3Q86YV0 1011 aa14.85□□□□□ -0.03
CCDC47-206ENST00000584112 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC47-206ENST00000584112 SHTN1A0MZ66 631 aa14.84□□□□□ -0.03
CCDC47-206ENST00000584112 CANXP27824 592 aaKnown RBP14.84□□□□□ -0.03
CCDC47-206ENST00000584112 GMPSP49915 693 aaPredicted RBP14.84□□□□□ -0.03
CCDC47-206ENST00000584112 TEFQ10587 303 aa14.84□□□□□ -0.03
CCDC47-206ENST00000584112 SLC39A6Q13433 755 aa14.84□□□□□ -0.03
CCDC47-206ENST00000584112 TTC5Q8N0Z6 440 aa14.84□□□□□ -0.03
CCDC47-206ENST00000584112 VSIG10Q8N0Z9 540 aa14.84□□□□□ -0.03
CCDC47-206ENST00000584112 LARGE2Q8N3Y3 721 aa14.84□□□□□ -0.03
CCDC47-206ENST00000584112 FKTNO75072 461 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 NPR1P16066 1061 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 PRKAR2BP31323 418 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 PLA2G5P39877 138 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 ST5P78524 1137 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 Q7L0L9 218 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 PSMD1Q99460 953 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 TRIM17Q9Y577 477 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 ERBB4Q15303 1308 aa14.83□□□□□ -0.04
CCDC47-206ENST00000584112 SCN7AQ01118 1682 aa14.82□□□□□ -0.04
CCDC47-206ENST00000584112 U2AF1L5P0DN76 240 aaPredicted RBP14.82□□□□□ -0.04
CCDC47-206ENST00000584112 U2AF1Q01081 240 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCDC47-206ENST00000584112 ZC3H15Q8WU90 426 aaKnown RBP14.82□□□□□ -0.04
CCDC47-206ENST00000584112 STXBP5LQ9Y2K9 1186 aa14.82□□□□□ -0.04
CCDC47-206ENST00000584112 ADM5C9JUS6 153 aa14.81□□□□□ -0.04
CCDC47-206ENST00000584112 IL17REQ8NFR9 667 aa14.81□□□□□ -0.04
CCDC47-206ENST00000584112 CEMIPQ8WUJ3 1361 aa14.81□□□□□ -0.04
CCDC47-206ENST00000584112 OTOP1Q7RTM1 612 aa14.8□□□□□ -0.04
CCDC47-206ENST00000584112 DEFB123Q8N688 67 aa14.8□□□□□ -0.04
CCDC47-206ENST00000584112 TBC1D2BQ9UPU7 963 aa14.8□□□□□ -0.04
CCDC47-206ENST00000584112 EYSQ5T1H1 3165 aa14.8□□□□□ -0.04
CCDC47-206ENST00000584112 STARD3NLO95772 234 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms