RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 ZNF34Q8IZ26 560 aa17.84■□□□□ 0.45
CCDC57-218ENST00000583593 LTBP1Q14766 1721 aa17.84■□□□□ 0.45
CCDC57-218ENST00000583593 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.45
CCDC57-218ENST00000583593 KIF6Q6ZMV9 814 aa17.83■□□□□ 0.44
CCDC57-218ENST00000583593 LRP10Q7Z4F1 713 aa17.83■□□□□ 0.44
CCDC57-218ENST00000583593 GPC2Q8N158 579 aa17.83■□□□□ 0.44
CCDC57-218ENST00000583593 ZBTB3Q9H5J0 574 aa17.83■□□□□ 0.44
CCDC57-218ENST00000583593 TMEM88BA6NKF7 163 aa17.82■□□□□ 0.44
CCDC57-218ENST00000583593 NTSR2O95665 410 aa17.82■□□□□ 0.44
CCDC57-218ENST00000583593 NEFMP07197 916 aa17.82■□□□□ 0.44
CCDC57-218ENST00000583593 C3orf67Q6ZVT6 689 aa17.82■□□□□ 0.44
CCDC57-218ENST00000583593 CLEC11AQ9Y240 323 aa17.82■□□□□ 0.44
CCDC57-218ENST00000583593 FOXN1O15353 648 aa17.81■□□□□ 0.44
CCDC57-218ENST00000583593 VEGFBP49765 207 aa17.81■□□□□ 0.44
CCDC57-218ENST00000583593 CC2D2BQ6DHV5 1058 aa17.81■□□□□ 0.44
CCDC57-218ENST00000583593 PDIA6Q15084 440 aa17.8■□□□□ 0.44
CCDC57-218ENST00000583593 MAP1SQ66K74 1059 aaPredicted RBP17.8■□□□□ 0.44
CCDC57-218ENST00000583593 GIGYF2Q6Y7W6 1299 aaKnown RBP17.8■□□□□ 0.44
CCDC57-218ENST00000583593 PNMA8AQ86V59 439 aaPredicted RBP17.8■□□□□ 0.44
CCDC57-218ENST00000583593 CNTROBQ8N137 903 aa17.8■□□□□ 0.44
CCDC57-218ENST00000583593 CRAMP1Q96RY5 1269 aa17.8■□□□□ 0.44
CCDC57-218ENST00000583593 ERBB4Q15303 1308 aa17.79■□□□□ 0.44
CCDC57-218ENST00000583593 JDP2Q8WYK2 163 aa17.79■□□□□ 0.44
CCDC57-218ENST00000583593 RPGRQ92834 1020 aaKnown RBP17.79■□□□□ 0.44
CCDC57-218ENST00000583593 SCNN1DP51172 638 aa17.78■□□□□ 0.44
CCDC57-218ENST00000583593 GJA3Q9Y6H8 435 aa17.78■□□□□ 0.44
CCDC57-218ENST00000583593 RASSF10A6NK89 507 aa17.77■□□□□ 0.44
CCDC57-218ENST00000583593 PPEF1O14829 653 aaPredicted RBP17.77■□□□□ 0.44
CCDC57-218ENST00000583593 EIF6P56537 245 aaKnown RBP17.77■□□□□ 0.44
CCDC57-218ENST00000583593 PROSER3Q2NL68 480 aa17.77■□□□□ 0.44
CCDC57-218ENST00000583593 RBM17Q96I25 401 aaKnown RBP17.77■□□□□ 0.44
CCDC57-218ENST00000583593 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.44
CCDC57-218ENST00000583593 MAPK8IP3Q9UPT6 1336 aa17.76■□□□□ 0.43
CCDC57-218ENST00000583593 TCERG1O14776 1098 aaKnown RBP17.76■□□□□ 0.43
CCDC57-218ENST00000583593 ANXA1P04083 346 aa17.76■□□□□ 0.43
CCDC57-218ENST00000583593 EPS15P42566 896 aa17.76■□□□□ 0.43
CCDC57-218ENST00000583593 GRIPAP1Q4V328 841 aa17.76■□□□□ 0.43
CCDC57-218ENST00000583593 SLC10A5Q5PT55 438 aa17.76■□□□□ 0.43
CCDC57-218ENST00000583593 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
CCDC57-218ENST00000583593 WBP1LQ9NX94 342 aa17.76■□□□□ 0.43
CCDC57-218ENST00000583593 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
CCDC57-218ENST00000583593 RIPK4P57078 832 aa17.75■□□□□ 0.43
CCDC57-218ENST00000583593 FMR1Q06787 632 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCDC57-218ENST00000583593 PPP1R42Q7Z4L9 355 aa17.75■□□□□ 0.43
CCDC57-218ENST00000583593 LARGE2Q8N3Y3 721 aa17.75■□□□□ 0.43
CCDC57-218ENST00000583593 PRDM10Q9NQV6 1147 aa17.75■□□□□ 0.43
CCDC57-218ENST00000583593 LAMB2P55268 1798 aa17.75■□□□□ 0.43
CCDC57-218ENST00000583593 ANKRD36CQ5JPF3 1778 aa17.75■□□□□ 0.43
CCDC57-218ENST00000583593 DEFB115Q30KQ5 88 aa17.74■□□□□ 0.43
CCDC57-218ENST00000583593 PARP10Q53GL7 1025 aa17.74■□□□□ 0.43
CCDC57-218ENST00000583593 NLRP3Q96P20 1036 aa17.74■□□□□ 0.43
CCDC57-218ENST00000583593 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC57-218ENST00000583593 ABCC4O15439 1325 aa17.73■□□□□ 0.43
CCDC57-218ENST00000583593 UTP14AQ9BVJ6 771 aaKnown RBP17.73■□□□□ 0.43
CCDC57-218ENST00000583593 ATP6V0A2Q9Y487 856 aa17.73■□□□□ 0.43
CCDC57-218ENST00000583593 PPIP5K2O43314 1243 aa17.72■□□□□ 0.43
CCDC57-218ENST00000583593 LMOD1P29536 600 aaPredicted RBP17.72■□□□□ 0.43
CCDC57-218ENST00000583593 CTCFP49711 727 aaPredicted RBP17.72■□□□□ 0.43
CCDC57-218ENST00000583593 AOC3Q16853 763 aa17.72■□□□□ 0.43
CCDC57-218ENST00000583593 BABAM1Q9NWV8 329 aa17.72■□□□□ 0.43
CCDC57-218ENST00000583593 TMPOP42166 694 aaKnown RBP17.71■□□□□ 0.43
CCDC57-218ENST00000583593 COPS6Q7L5N1 327 aa17.71■□□□□ 0.43
CCDC57-218ENST00000583593 NIM1KQ8IY84 436 aa17.71■□□□□ 0.43
CCDC57-218ENST00000583593 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
CCDC57-218ENST00000583593 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
CCDC57-218ENST00000583593 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
CCDC57-218ENST00000583593 TAF1P21675 1872 aa17.71■□□□□ 0.43
CCDC57-218ENST00000583593 TRPM7Q96QT4 1865 aa17.71■□□□□ 0.43
CCDC57-218ENST00000583593 WDR33Q9C0J8 1336 aaKnown RBP17.71■□□□□ 0.42
CCDC57-218ENST00000583593 LBX1P52954 281 aa17.7■□□□□ 0.42
CCDC57-218ENST00000583593 CST9Q5W186 159 aa17.7■□□□□ 0.42
CCDC57-218ENST00000583593 USP50Q70EL3 339 aaPredicted RBP17.7■□□□□ 0.42
CCDC57-218ENST00000583593 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
CCDC57-218ENST00000583593 VPS33BQ9H267 617 aa17.7■□□□□ 0.42
CCDC57-218ENST00000583593 ABT1Q9ULW3 272 aaKnown RBP17.7■□□□□ 0.42
CCDC57-218ENST00000583593 THSD7BQ9C0I4 1608 aa17.69■□□□□ 0.42
CCDC57-218ENST00000583593 TRAF5O00463 557 aa17.69■□□□□ 0.42
CCDC57-218ENST00000583593 HCLS1P14317 486 aaPredicted RBP17.69■□□□□ 0.42
CCDC57-218ENST00000583593 CXCL9Q07325 125 aa17.69■□□□□ 0.42
CCDC57-218ENST00000583593 AIMP1Q12904 312 aaKnown RBP17.69■□□□□ 0.42
CCDC57-218ENST00000583593 KRT24Q2M2I5 525 aa17.69■□□□□ 0.42
CCDC57-218ENST00000583593 XAGE3Q8WTP9 111 aa17.69■□□□□ 0.42
CCDC57-218ENST00000583593 HSPA8P11142 646 aaKnown RBP17.68■□□□□ 0.42
CCDC57-218ENST00000583593 TCIRG1Q13488 830 aa17.68■□□□□ 0.42
CCDC57-218ENST00000583593 SP8Q8IXZ3 490 aa17.68■□□□□ 0.42
CCDC57-218ENST00000583593 GPRC5DQ9NZD1 345 aa17.68■□□□□ 0.42
CCDC57-218ENST00000583593 BBOX1O75936 387 aa17.67■□□□□ 0.42
CCDC57-218ENST00000583593 HSP90AB3PQ58FF7 597 aa17.67■□□□□ 0.42
CCDC57-218ENST00000583593 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
CCDC57-218ENST00000583593 ZNRF3Q9ULT6 936 aa17.67■□□□□ 0.42
CCDC57-218ENST00000583593 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
CCDC57-218ENST00000583593 CHL1O00533 1208 aa17.66■□□□□ 0.42
CCDC57-218ENST00000583593 KIAA2012Q0VF49 1180 aa17.66■□□□□ 0.42
CCDC57-218ENST00000583593 RALBP1Q15311 655 aa17.66■□□□□ 0.42
CCDC57-218ENST00000583593 DPP8Q6V1X1 898 aaPredicted RBP17.66■□□□□ 0.42
CCDC57-218ENST00000583593 MPNDQ8N594 471 aa17.66■□□□□ 0.42
CCDC57-218ENST00000583593 SUPT20HQ8NEM7 779 aa17.66■□□□□ 0.42
CCDC57-218ENST00000583593 DUOX1Q9NRD9 1551 aa17.66■□□□□ 0.42
CCDC57-218ENST00000583593 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
CCDC57-218ENST00000583593 MAP2K1Q02750 393 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms