RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CRY2Q49AN0 593 aa32.21■■■□□ 2.75
TSEN54-209ENST00000583454 CCDC93Q567U6 631 aa32.21■■■□□ 2.75
TSEN54-209ENST00000583454 DPY19L2Q6NUT2 758 aa32.21■■■□□ 2.75
TSEN54-209ENST00000583454 EIF2S2P20042 333 aaKnown RBP32.2■■■□□ 2.75
TSEN54-209ENST00000583454 NUTM1Q86Y26 1132 aa32.2■■■□□ 2.75
TSEN54-209ENST00000583454 ANKRD36CQ5JPF3 1778 aa32.19■■■□□ 2.74
TSEN54-209ENST00000583454 PDIA6Q15084 440 aa32.19■■■□□ 2.74
TSEN54-209ENST00000583454 DUSP27Q5VZP5 1158 aa32.19■■■□□ 2.74
TSEN54-209ENST00000583454 KIF6Q6ZMV9 814 aa32.19■■■□□ 2.74
TSEN54-209ENST00000583454 KLRG1Q96E93 195 aa32.19■■■□□ 2.74
TSEN54-209ENST00000583454 ZBTB3Q9H5J0 574 aa32.19■■■□□ 2.74
TSEN54-209ENST00000583454 SCN4AP35499 1836 aa32.18■■■□□ 2.74
TSEN54-209ENST00000583454 DDNO94850 711 aaPredicted RBP32.17■■■□□ 2.74
TSEN54-209ENST00000583454 FKBP4Q02790 459 aaKnown RBP eCLIP32.17■■■□□ 2.74
TSEN54-209ENST00000583454 IFFO2Q5TF58 517 aa32.17■■■□□ 2.74
TSEN54-209ENST00000583454 ZNF34Q8IZ26 560 aa32.17■■■□□ 2.74
TSEN54-209ENST00000583454 NYXQ9GZU5 481 aa32.17■■■□□ 2.74
TSEN54-209ENST00000583454 ZNF521Q96K83 1311 aa32.17■■■□□ 2.74
TSEN54-209ENST00000583454 GPTP24298 496 aa32.16■■■□□ 2.74
TSEN54-209ENST00000583454 TSR2Q969E8 191 aaKnown RBP32.16■■■□□ 2.74
TSEN54-209ENST00000583454 GTF2E1P29083 439 aaPredicted RBP32.15■■■□□ 2.74
TSEN54-209ENST00000583454 PROSER3Q2NL68 480 aa32.15■■■□□ 2.74
TSEN54-209ENST00000583454 SUSD4Q5VX71 490 aa32.15■■■□□ 2.74
TSEN54-209ENST00000583454 GIGYF2Q6Y7W6 1299 aaKnown RBP32.15■■■□□ 2.74
TSEN54-209ENST00000583454 JMYQ8N9B5 988 aa32.15■■■□□ 2.74
TSEN54-209ENST00000583454 C8orf58Q8NAV2 365 aa32.15■■■□□ 2.74
TSEN54-209ENST00000583454 NTSR2O95665 410 aa32.13■■■□□ 2.73
TSEN54-209ENST00000583454 ALDH1B1P30837 517 aa32.13■■■□□ 2.73
TSEN54-209ENST00000583454 ZNF277Q9NRM2 450 aaPredicted RBP32.13■■■□□ 2.73
TSEN54-209ENST00000583454 LAMB2P55268 1798 aa32.12■■■□□ 2.73
TSEN54-209ENST00000583454 HDGFL1Q5TGJ6 251 aa32.12■■■□□ 2.73
TSEN54-209ENST00000583454 NECTIN2Q92692 538 aa32.12■■■□□ 2.73
TSEN54-209ENST00000583454 SPINK5Q9NQ38 1064 aaPredicted RBP32.12■■■□□ 2.73
TSEN54-209ENST00000583454 HOXA10P31260 410 aaPredicted RBP32.11■■■□□ 2.73
TSEN54-209ENST00000583454 RTKN2Q8IZC4 609 aa32.11■■■□□ 2.73
TSEN54-209ENST00000583454 DDX21Q9NR30 783 aaKnown RBP eCLIP32.11■■■□□ 2.73
TSEN54-209ENST00000583454 COL4A5P29400 1685 aa32.11■■■□□ 2.73
TSEN54-209ENST00000583454 ZNF541Q9H0D2 1346 aa32.1■■■□□ 2.73
TSEN54-209ENST00000583454 FANCIQ9NVI1 1328 aa32.1■■■□□ 2.73
TSEN54-209ENST00000583454 ELL2O00472 640 aaPredicted RBP32.1■■■□□ 2.73
TSEN54-209ENST00000583454 ANXA1P04083 346 aa32.1■■■□□ 2.73
TSEN54-209ENST00000583454 POTEIP0CG38 1075 aa32.1■■■□□ 2.73
TSEN54-209ENST00000583454 POTEJP0CG39 1038 aa32.1■■■□□ 2.73
TSEN54-209ENST00000583454 L3MBTL3Q96JM7 780 aaPredicted RBP32.1■■■□□ 2.73
TSEN54-209ENST00000583454 C3orf67Q6ZVT6 689 aa32.09■■■□□ 2.73
TSEN54-209ENST00000583454 SLC51AQ86UW1 340 aa32.08■■■□□ 2.73
TSEN54-209ENST00000583454 TSPYL6Q8N831 410 aa32.08■■■□□ 2.73
TSEN54-209ENST00000583454 ADAMTSL1Q8N6G6 1762 aa32.08■■■□□ 2.73
TSEN54-209ENST00000583454 CHPF2Q9P2E5 772 aa32.07■■■□□ 2.72
TSEN54-209ENST00000583454 SYNE4Q8N205 404 aa32.06■■■□□ 2.72
TSEN54-209ENST00000583454 PSMD1Q99460 953 aa32.06■■■□□ 2.72
TSEN54-209ENST00000583454 DBF4Q9UBU7 674 aaPredicted RBP32.06■■■□□ 2.72
TSEN54-209ENST00000583454 IARSP41252 1262 aaKnown RBP32.05■■■□□ 2.72
TSEN54-209ENST00000583454 GOLGA2Q08379 1002 aa32.05■■■□□ 2.72
TSEN54-209ENST00000583454 CHMP4AQ9BY43 222 aa32.05■■■□□ 2.72
TSEN54-209ENST00000583454 MYH16Q9H6N6 1097 aa32.05■■■□□ 2.72
TSEN54-209ENST00000583454 PARP10Q53GL7 1025 aa32.04■■■□□ 2.72
TSEN54-209ENST00000583454 CHADLQ6NUI6 762 aa32.04■■■□□ 2.72
TSEN54-209ENST00000583454 FZD9O00144 591 aa32.03■■■□□ 2.72
TSEN54-209ENST00000583454 RPGRQ92834 1020 aaKnown RBP32.03■■■□□ 2.72
TSEN54-209ENST00000583454 CRAMP1Q96RY5 1269 aa32.03■■■□□ 2.72
TSEN54-209ENST00000583454 TWISTNBQ3B726 338 aaPredicted RBP32.02■■■□□ 2.72
TSEN54-209ENST00000583454 PPP1R42Q7Z4L9 355 aa32.02■■■□□ 2.72
TSEN54-209ENST00000583454 TAF1DQ9H5J8 278 aaPredicted RBP32.02■■■□□ 2.72
TSEN54-209ENST00000583454 IQCA1LA6NCM1 817 aa32.01■■■□□ 2.71
TSEN54-209ENST00000583454 SLC10A5Q5PT55 438 aa32.01■■■□□ 2.71
TSEN54-209ENST00000583454 CC2D2BQ6DHV5 1058 aa32.01■■■□□ 2.71
TSEN54-209ENST00000583454 COPS6Q7L5N1 327 aa32.01■■■□□ 2.71
TSEN54-209ENST00000583454 XAGE3Q8WTP9 111 aa32.01■■■□□ 2.71
TSEN54-209ENST00000583454 HYPKQ9NX55 129 aa32.01■■■□□ 2.71
TSEN54-209ENST00000583454 CCDC30Q5VVM6 783 aa32■■■□□ 2.71
TSEN54-209ENST00000583454 EXOSC9Q06265 439 aaKnown RBP31.99■■■□□ 2.71
TSEN54-209ENST00000583454 LTBP1Q14766 1721 aa31.99■■■□□ 2.71
TSEN54-209ENST00000583454 TAF1P21675 1872 aa31.98■■■□□ 2.71
TSEN54-209ENST00000583454 RBM17Q96I25 401 aaKnown RBP31.98■■■□□ 2.71
TSEN54-209ENST00000583454 UTP14AQ9BVJ6 771 aaKnown RBP31.98■■■□□ 2.71
TSEN54-209ENST00000583454 DDX60Q8IY21 1712 aaKnown RBP31.97■■■□□ 2.71
TSEN54-209ENST00000583454 E9PSI1 815 aa31.97■■■□□ 2.71
TSEN54-209ENST00000583454 RNF123Q5XPI4 1314 aa31.97■■■□□ 2.71
TSEN54-209ENST00000583454 PPEF1O14829 653 aaPredicted RBP31.96■■■□□ 2.71
TSEN54-209ENST00000583454 VAMP4O75379 141 aa31.96■■■□□ 2.71
TSEN54-209ENST00000583454 AIMP1Q12904 312 aaKnown RBP31.96■■■□□ 2.71
TSEN54-209ENST00000583454 NLRP10Q86W26 655 aa31.96■■■□□ 2.71
TSEN54-209ENST00000583454 LDHDQ86WU2 507 aa31.96■■■□□ 2.71
TSEN54-209ENST00000583454 PASKQ96RG2 1323 aa31.96■■■□□ 2.71
TSEN54-209ENST00000583454 SLFN5Q08AF3 891 aa31.95■■■□□ 2.71
TSEN54-209ENST00000583454 NLRP3Q96P20 1036 aa31.95■■■□□ 2.71
TSEN54-209ENST00000583454 TCIRG1Q13488 830 aa31.93■■■□□ 2.7
TSEN54-209ENST00000583454 GRIPAP1Q4V328 841 aa31.93■■■□□ 2.7
TSEN54-209ENST00000583454 HSP90AB3PQ58FF7 597 aa31.93■■■□□ 2.7
TSEN54-209ENST00000583454 GPC2Q8N158 579 aa31.93■■■□□ 2.7
TSEN54-209ENST00000583454 HACL1Q9UJ83 578 aa31.93■■■□□ 2.7
TSEN54-209ENST00000583454 ABCC4O15439 1325 aa31.93■■■□□ 2.7
TSEN54-209ENST00000583454 TRMT2AQ8IZ69 625 aaKnown RBP31.92■■■□□ 2.7
TSEN54-209ENST00000583454 CREBZFQ9NS37 354 aa31.92■■■□□ 2.7
TSEN54-209ENST00000583454 TCERG1O14776 1098 aaKnown RBP31.91■■■□□ 2.7
TSEN54-209ENST00000583454 EPHX2P34913 555 aa31.91■■■□□ 2.7
TSEN54-209ENST00000583454 ANKRD13DQ6ZTN6 518 aa31.91■■■□□ 2.7
TSEN54-209ENST00000583454 PLBD2Q8NHP8 589 aa31.91■■■□□ 2.7
TSEN54-209ENST00000583454 JDP2Q8WYK2 163 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms