RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
SS18-222ENST00000582792 COL4A5P29400 1685 aa17.97■□□□□ 0.47
SS18-222ENST00000582792 RASSF10A6NK89 507 aa17.97■□□□□ 0.47
SS18-222ENST00000582792 NEFMP07197 916 aa17.97■□□□□ 0.47
SS18-222ENST00000582792 HOXA10P31260 410 aaPredicted RBP17.97■□□□□ 0.47
SS18-222ENST00000582792 CTCFP49711 727 aaPredicted RBP17.97■□□□□ 0.47
SS18-222ENST00000582792 EIF4A1P60842 406 aaKnown RBP17.97■□□□□ 0.47
SS18-222ENST00000582792 KIF6Q6ZMV9 814 aa17.97■□□□□ 0.47
SS18-222ENST00000582792 TTLL7Q6ZT98 887 aa17.97■□□□□ 0.47
SS18-222ENST00000582792 RPGRQ92834 1020 aaKnown RBP17.97■□□□□ 0.47
SS18-222ENST00000582792 WBP1LQ9NX94 342 aa17.97■□□□□ 0.47
SS18-222ENST00000582792 RRP7AQ9Y3A4 280 aaKnown RBP17.97■□□□□ 0.47
SS18-222ENST00000582792 UBN2Q6ZU65 1347 aa17.97■□□□□ 0.47
SS18-222ENST00000582792 EIF6P56537 245 aaKnown RBP17.96■□□□□ 0.47
SS18-222ENST00000582792 GRIPAP1Q4V328 841 aa17.96■□□□□ 0.47
SS18-222ENST00000582792 MYL6BP14649 208 aa17.95■□□□□ 0.46
SS18-222ENST00000582792 GPTP24298 496 aa17.95■□□□□ 0.46
SS18-222ENST00000582792 DEFB115Q30KQ5 88 aa17.95■□□□□ 0.46
SS18-222ENST00000582792 GJA3Q9Y6H8 435 aa17.95■□□□□ 0.46
SS18-222ENST00000582792 LTBP1Q14766 1721 aa17.95■□□□□ 0.46
SS18-222ENST00000582792 SUSD4Q5VX71 490 aa17.94■□□□□ 0.46
SS18-222ENST00000582792 CRAMP1Q96RY5 1269 aa17.94■□□□□ 0.46
SS18-222ENST00000582792 PLEKHF1Q96S99 279 aa17.94■□□□□ 0.46
SS18-222ENST00000582792 ZBTB3Q9H5J0 574 aa17.94■□□□□ 0.46
SS18-222ENST00000582792 NTSR2O95665 410 aa17.93■□□□□ 0.46
SS18-222ENST00000582792 LMOD1P29536 600 aaPredicted RBP17.93■□□□□ 0.46
SS18-222ENST00000582792 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
SS18-222ENST00000582792 ZNF34Q8IZ26 560 aa17.93■□□□□ 0.46
SS18-222ENST00000582792 LARGE2Q8N3Y3 721 aa17.93■□□□□ 0.46
SS18-222ENST00000582792 RBM17Q96I25 401 aaKnown RBP17.93■□□□□ 0.46
SS18-222ENST00000582792 THUMPD2Q9BTF0 503 aaKnown RBP17.93■□□□□ 0.46
SS18-222ENST00000582792 DDX21Q9NR30 783 aaKnown RBP eCLIP17.93■□□□□ 0.46
SS18-222ENST00000582792 PPEF1O14829 653 aaPredicted RBP17.92■□□□□ 0.46
SS18-222ENST00000582792 SCNN1DP51172 638 aa17.92■□□□□ 0.46
SS18-222ENST00000582792 LBX1P52954 281 aa17.92■□□□□ 0.46
SS18-222ENST00000582792 GIGYF2Q6Y7W6 1299 aaKnown RBP17.92■□□□□ 0.46
SS18-222ENST00000582792 ERBB4Q15303 1308 aa17.92■□□□□ 0.46
SS18-222ENST00000582792 WDR33Q9C0J8 1336 aaKnown RBP17.92■□□□□ 0.46
SS18-222ENST00000582792 EPS15P42566 896 aa17.91■□□□□ 0.46
SS18-222ENST00000582792 SLC51AQ86UW1 340 aa17.91■□□□□ 0.46
SS18-222ENST00000582792 ABT1Q9ULW3 272 aaKnown RBP17.91■□□□□ 0.46
SS18-222ENST00000582792 MAP2K1Q02750 393 aaPredicted RBP17.9■□□□□ 0.46
SS18-222ENST00000582792 PARP10Q53GL7 1025 aa17.9■□□□□ 0.46
SS18-222ENST00000582792 C3orf67Q6ZVT6 689 aa17.9■□□□□ 0.46
SS18-222ENST00000582792 PPP1R42Q7Z4L9 355 aa17.9■□□□□ 0.46
SS18-222ENST00000582792 TCERG1O14776 1098 aaKnown RBP17.89■□□□□ 0.45
SS18-222ENST00000582792 HSPA8P11142 646 aaKnown RBP17.89■□□□□ 0.45
SS18-222ENST00000582792 USP50Q70EL3 339 aaPredicted RBP17.89■□□□□ 0.45
SS18-222ENST00000582792 NIM1KQ8IY84 436 aa17.89■□□□□ 0.45
SS18-222ENST00000582792 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
SS18-222ENST00000582792 THSD7BQ9C0I4 1608 aa17.89■□□□□ 0.45
SS18-222ENST00000582792 PPIP5K2O43314 1243 aa17.88■□□□□ 0.45
SS18-222ENST00000582792 LRP10Q7Z4F1 713 aa17.88■□□□□ 0.45
SS18-222ENST00000582792 VPS33BQ9H267 617 aa17.88■□□□□ 0.45
SS18-222ENST00000582792 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
SS18-222ENST00000582792 FMR1Q06787 632 aaKnown RBP eCLIP17.87■□□□□ 0.45
SS18-222ENST00000582792 SLC10A5Q5PT55 438 aa17.87■□□□□ 0.45
SS18-222ENST00000582792 TMX4Q9H1E5 349 aaPredicted RBP17.87■□□□□ 0.45
SS18-222ENST00000582792 ATP6V0A2Q9Y487 856 aa17.87■□□□□ 0.45
SS18-222ENST00000582792 MAPK8IP3Q9UPT6 1336 aa17.87■□□□□ 0.45
SS18-222ENST00000582792 TRPM7Q96QT4 1865 aa17.86■□□□□ 0.45
SS18-222ENST00000582792 PDIA6Q15084 440 aa17.86■□□□□ 0.45
SS18-222ENST00000582792 AOC3Q16853 763 aa17.86■□□□□ 0.45
SS18-222ENST00000582792 UTP14AQ9BVJ6 771 aaKnown RBP17.86■□□□□ 0.45
SS18-222ENST00000582792 TSPYL4Q9UJ04 414 aa17.86■□□□□ 0.45
SS18-222ENST00000582792 TRAF5O00463 557 aa17.85■□□□□ 0.45
SS18-222ENST00000582792 ABCC4O15439 1325 aa17.85■□□□□ 0.45
SS18-222ENST00000582792 ECE1P42892 770 aa17.85■□□□□ 0.45
SS18-222ENST00000582792 CST9Q5W186 159 aa17.85■□□□□ 0.45
SS18-222ENST00000582792 CAPNS2Q96L46 248 aa17.85■□□□□ 0.45
SS18-222ENST00000582792 RTFDC1Q9BY42 306 aaPredicted RBP17.85■□□□□ 0.45
SS18-222ENST00000582792 ADARB2Q9NS39 739 aaKnown RBP17.85■□□□□ 0.45
SS18-222ENST00000582792 GPRC5DQ9NZD1 345 aa17.85■□□□□ 0.45
SS18-222ENST00000582792 EIF2S2P20042 333 aaKnown RBP17.84■□□□□ 0.45
SS18-222ENST00000582792 CYP4F22Q6NT55 531 aa17.84■□□□□ 0.45
SS18-222ENST00000582792 PAXIP1Q6ZW49 1069 aaPredicted RBP17.84■□□□□ 0.45
SS18-222ENST00000582792 SUPT20HQ8NEM7 779 aa17.84■□□□□ 0.45
SS18-222ENST00000582792 ZNRF3Q9ULT6 936 aa17.84■□□□□ 0.45
SS18-222ENST00000582792 TLL2Q9Y6L7 1015 aa17.84■□□□□ 0.45
SS18-222ENST00000582792 ANKRD36CQ5JPF3 1778 aa17.84■□□□□ 0.45
SS18-222ENST00000582792 CXCL9Q07325 125 aa17.83■□□□□ 0.44
SS18-222ENST00000582792 PROSER3Q2NL68 480 aa17.83■□□□□ 0.44
SS18-222ENST00000582792 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.44
SS18-222ENST00000582792 LAMB2P55268 1798 aa17.83■□□□□ 0.44
SS18-222ENST00000582792 BBOX1O75936 387 aa17.82■□□□□ 0.44
SS18-222ENST00000582792 ANXA1P04083 346 aa17.82■□□□□ 0.44
SS18-222ENST00000582792 DPP8Q6V1X1 898 aaPredicted RBP17.82■□□□□ 0.44
SS18-222ENST00000582792 ABHD8Q96I13 439 aa17.82■□□□□ 0.44
SS18-222ENST00000582792 GPR101Q96P66 508 aaPredicted RBP17.82■□□□□ 0.44
SS18-222ENST00000582792 CDHR2Q9BYE9 1310 aa17.81■□□□□ 0.44
SS18-222ENST00000582792 GMPSP49915 693 aaPredicted RBP17.81■□□□□ 0.44
SS18-222ENST00000582792 RIPK4P57078 832 aa17.81■□□□□ 0.44
SS18-222ENST00000582792 GRM1Q13255 1194 aa17.81■□□□□ 0.44
SS18-222ENST00000582792 HSP90AB3PQ58FF7 597 aa17.81■□□□□ 0.44
SS18-222ENST00000582792 SP8Q8IXZ3 490 aa17.81■□□□□ 0.44
SS18-222ENST00000582792 BEGAINQ9BUH8 593 aa17.81■□□□□ 0.44
SS18-222ENST00000582792 KIAA2012Q0VF49 1180 aa17.8■□□□□ 0.44
SS18-222ENST00000582792 CIAPIN1Q6FI81 312 aa17.8■□□□□ 0.44
SS18-222ENST00000582792 COPS6Q7L5N1 327 aa17.8■□□□□ 0.44
SS18-222ENST00000582792 NLRP10Q86W26 655 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms