RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 IL16Q14005 1332 aa24.25■■□□□ 1.47
LIMS2-218ENST00000582671 CRY2Q49AN0 593 aa24.24■■□□□ 1.47
LIMS2-218ENST00000582671 HSP90AB3PQ58FF7 597 aa24.24■■□□□ 1.47
LIMS2-218ENST00000582671 ANKRD13DQ6ZTN6 518 aa24.24■■□□□ 1.47
LIMS2-218ENST00000582671 PPP1R42Q7Z4L9 355 aa24.24■■□□□ 1.47
LIMS2-218ENST00000582671 NLRP10Q86W26 655 aa24.24■■□□□ 1.47
LIMS2-218ENST00000582671 PHAXQ9H814 394 aaKnown RBP24.24■■□□□ 1.47
LIMS2-218ENST00000582671 DDX60Q8IY21 1712 aaKnown RBP24.24■■□□□ 1.47
LIMS2-218ENST00000582671 C3orf67Q6ZVT6 689 aa24.23■■□□□ 1.47
LIMS2-218ENST00000582671 C7orf43Q8WVR3 580 aa24.23■■□□□ 1.47
LIMS2-218ENST00000582671 UTP14AQ9BVJ6 771 aaKnown RBP24.23■■□□□ 1.47
LIMS2-218ENST00000582671 TAF1P21675 1872 aa24.22■■□□□ 1.47
LIMS2-218ENST00000582671 CACNA1FO60840 1977 aa24.22■■□□□ 1.47
LIMS2-218ENST00000582671 LMNB1P20700 586 aa24.21■■□□□ 1.47
LIMS2-218ENST00000582671 WDR63Q8IWG1 891 aa24.21■■□□□ 1.47
LIMS2-218ENST00000582671 ZNF428Q96B54 188 aa24.21■■□□□ 1.47
LIMS2-218ENST00000582671 FANCIQ9NVI1 1328 aa24.2■■□□□ 1.46
LIMS2-218ENST00000582671 SLC10A5Q5PT55 438 aa24.2■■□□□ 1.46
LIMS2-218ENST00000582671 OLFM4Q6UX06 510 aa24.2■■□□□ 1.46
LIMS2-218ENST00000582671 SYNE4Q8N205 404 aa24.2■■□□□ 1.46
LIMS2-218ENST00000582671 C1QTNF8P60827 252 aa24.19■■□□□ 1.46
LIMS2-218ENST00000582671 CCDC30Q5VVM6 783 aa24.19■■□□□ 1.46
LIMS2-218ENST00000582671 ISCA1Q9BUE6 129 aa24.19■■□□□ 1.46
LIMS2-218ENST00000582671 SPINK5Q9NQ38 1064 aaPredicted RBP24.19■■□□□ 1.46
LIMS2-218ENST00000582671 ATP5J2-PTCD1G3V325 749 aa24.18■■□□□ 1.46
LIMS2-218ENST00000582671 TCERG1O14776 1098 aaKnown RBP24.18■■□□□ 1.46
LIMS2-218ENST00000582671 ALDH1B1P30837 517 aa24.18■■□□□ 1.46
LIMS2-218ENST00000582671 HOXA10P31260 410 aaPredicted RBP24.18■■□□□ 1.46
LIMS2-218ENST00000582671 TWISTNBQ3B726 338 aaPredicted RBP24.18■■□□□ 1.46
LIMS2-218ENST00000582671 RNF123Q5XPI4 1314 aa24.17■■□□□ 1.46
LIMS2-218ENST00000582671 KIF3CO14782 793 aa24.17■■□□□ 1.46
LIMS2-218ENST00000582671 TAOK3Q9H2K8 898 aa24.17■■□□□ 1.46
LIMS2-218ENST00000582671 LTBP3Q9NS15 1303 aa24.16■■□□□ 1.46
LIMS2-218ENST00000582671 SOGA3Q5TF21 947 aa24.16■■□□□ 1.46
LIMS2-218ENST00000582671 RPGRQ92834 1020 aaKnown RBP24.16■■□□□ 1.46
LIMS2-218ENST00000582671 NLRP3Q96P20 1036 aa24.16■■□□□ 1.46
LIMS2-218ENST00000582671 NMRK2Q9NPI5 230 aa24.16■■□□□ 1.46
LIMS2-218ENST00000582671 TRMT112Q9UI30 125 aaKnown RBP24.16■■□□□ 1.46
LIMS2-218ENST00000582671 HCLS1P14317 486 aaPredicted RBP24.15■■□□□ 1.46
LIMS2-218ENST00000582671 GOLGA2Q08379 1002 aa24.15■■□□□ 1.46
LIMS2-218ENST00000582671 CCDC93Q567U6 631 aa24.15■■□□□ 1.46
LIMS2-218ENST00000582671 RIC3Q7Z5B4 369 aa24.15■■□□□ 1.46
LIMS2-218ENST00000582671 SNED1Q8TER0 1413 aa24.15■■□□□ 1.46
LIMS2-218ENST00000582671 SH3TC1Q8TE82 1336 aa24.14■■□□□ 1.46
LIMS2-218ENST00000582671 SLC51AQ86UW1 340 aa24.14■■□□□ 1.45
LIMS2-218ENST00000582671 EXOSC9Q06265 439 aaKnown RBP24.13■■□□□ 1.45
LIMS2-218ENST00000582671 RBM17Q96I25 401 aaKnown RBP24.13■■□□□ 1.45
LIMS2-218ENST00000582671 CRAMP1Q96RY5 1269 aa24.13■■□□□ 1.45
LIMS2-218ENST00000582671 CHMP4AQ9BY43 222 aa24.13■■□□□ 1.45
LIMS2-218ENST00000582671 ZC3H4Q9UPT8 1303 aaKnown RBP24.12■■□□□ 1.45
LIMS2-218ENST00000582671 TRIM28Q13263 835 aaKnown RBP24.12■■□□□ 1.45
LIMS2-218ENST00000582671 G2E3Q7L622 706 aa24.12■■□□□ 1.45
LIMS2-218ENST00000582671 FAM89AQ96GI7 184 aa24.12■■□□□ 1.45
LIMS2-218ENST00000582671 ZNF521Q96K83 1311 aa24.11■■□□□ 1.45
LIMS2-218ENST00000582671 VAMP4O75379 141 aa24.11■■□□□ 1.45
LIMS2-218ENST00000582671 MYD88Q99836 296 aa24.11■■□□□ 1.45
LIMS2-218ENST00000582671 FKBP4Q02790 459 aaKnown RBP eCLIP24.1■■□□□ 1.45
LIMS2-218ENST00000582671 STK31Q9BXU1 1019 aa24.1■■□□□ 1.45
LIMS2-218ENST00000582671 ABCC4O15439 1325 aa24.1■■□□□ 1.45
LIMS2-218ENST00000582671 KDM2BQ8NHM5 1336 aa24.1■■□□□ 1.45
LIMS2-218ENST00000582671 COL4A1P02462 1669 aa24.09■■□□□ 1.45
LIMS2-218ENST00000582671 SLC4A2P04920 1241 aa24.09■■□□□ 1.45
LIMS2-218ENST00000582671 RTL5Q5HYW3 569 aaPredicted RBP24.09■■□□□ 1.45
LIMS2-218ENST00000582671 RTKN2Q8IZC4 609 aa24.09■■□□□ 1.45
LIMS2-218ENST00000582671 METTL22Q9BUU2 404 aaPredicted RBP24.09■■□□□ 1.45
LIMS2-218ENST00000582671 MAP3K2Q9Y2U5 619 aa24.09■■□□□ 1.45
LIMS2-218ENST00000582671 PPEF1O14829 653 aaPredicted RBP24.08■■□□□ 1.45
LIMS2-218ENST00000582671 DDX58O95786 925 aaKnown RBP24.08■■□□□ 1.45
LIMS2-218ENST00000582671 KSR2Q6VAB6 950 aa24.08■■□□□ 1.45
LIMS2-218ENST00000582671 RRAGCQ9HB90 399 aa24.08■■□□□ 1.45
LIMS2-218ENST00000582671 ZNF277Q9NRM2 450 aaPredicted RBP24.08■■□□□ 1.45
LIMS2-218ENST00000582671 WDR90Q96KV7 1748 aa24.07■■□□□ 1.44
LIMS2-218ENST00000582671 PI4KAP2A4QPH2 592 aa24.07■■□□□ 1.44
LIMS2-218ENST00000582671 GLTPD2A6NH11 291 aa24.07■■□□□ 1.44
LIMS2-218ENST00000582671 CCER2I3L3R5 266 aa24.07■■□□□ 1.44
LIMS2-218ENST00000582671 PI4KAP1Q8N8J0 262 aa24.07■■□□□ 1.44
LIMS2-218ENST00000582671 MYH16Q9H6N6 1097 aa24.06■■□□□ 1.44
LIMS2-218ENST00000582671 MYH3P11055 1940 aa24.06■■□□□ 1.44
LIMS2-218ENST00000582671 LRRC37AA6NMS7 1700 aa24.05■■□□□ 1.44
LIMS2-218ENST00000582671 CC2D2BQ6DHV5 1058 aa24.05■■□□□ 1.44
LIMS2-218ENST00000582671 ZBTB38Q8NAP3 1195 aaPredicted RBP24.04■■□□□ 1.44
LIMS2-218ENST00000582671 CCDC191Q8NCU4 936 aa24.04■■□□□ 1.44
LIMS2-218ENST00000582671 JARID2Q92833 1246 aaPredicted RBP24.04■■□□□ 1.44
LIMS2-218ENST00000582671 COL4A5P29400 1685 aa24.04■■□□□ 1.44
LIMS2-218ENST00000582671 IRS4O14654 1257 aaPredicted RBP24.03■■□□□ 1.44
LIMS2-218ENST00000582671 IGKV5-2P06315 115 aa24.03■■□□□ 1.44
LIMS2-218ENST00000582671 SF3B3Q15393 1217 aaKnown RBP24.03■■□□□ 1.44
LIMS2-218ENST00000582671 PSMD1Q99460 953 aa24.03■■□□□ 1.44
LIMS2-218ENST00000582671 CWC25Q9NXE8 425 aaPredicted RBP24.03■■□□□ 1.44
LIMS2-218ENST00000582671 ATP6V0A2Q9Y487 856 aa24.03■■□□□ 1.44
LIMS2-218ENST00000582671 TOMM70O94826 608 aa24.02■■□□□ 1.44
LIMS2-218ENST00000582671 IARSP41252 1262 aaKnown RBP24.02■■□□□ 1.44
LIMS2-218ENST00000582671 FLIIQ13045 1269 aa24.02■■□□□ 1.44
LIMS2-218ENST00000582671 DDX46Q7L014 1031 aaKnown RBP24.02■■□□□ 1.44
LIMS2-218ENST00000582671 POTECB2RU33 542 aa24.01■■□□□ 1.43
LIMS2-218ENST00000582671 BBOX1O75936 387 aa24.01■■□□□ 1.43
LIMS2-218ENST00000582671 PCCAP05165 728 aaPredicted RBP24.01■■□□□ 1.43
LIMS2-218ENST00000582671 GRAPQ13588 217 aa24.01■■□□□ 1.43
LIMS2-218ENST00000582671 GRAPLQ8TC17 118 aaPredicted RBP24.01■■□□□ 1.43
LIMS2-218ENST00000582671 CWF19L2Q2TBE0 894 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms