RNA–Protein interactions for RNA: ENST00000582291.1

AC011840.1-201, humanhuman

TSL 3

Gene AC011840.1, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.1-201ENST00000582291 HOXA10P31260 410 aaPredicted RBP16.28■□□□□ 0.2
AC011840.1-201ENST00000582291 IARSP41252 1262 aaKnown RBP16.28■□□□□ 0.2
AC011840.1-201ENST00000582291 COL13A1Q5TAT6 717 aaPredicted RBP16.28■□□□□ 0.2
AC011840.1-201ENST00000582291 L3MBTL3Q96JM7 780 aaPredicted RBP16.28■□□□□ 0.2
AC011840.1-201ENST00000582291 TAF1DQ9H5J8 278 aaPredicted RBP16.28■□□□□ 0.2
AC011840.1-201ENST00000582291 ERBB4Q15303 1308 aa16.27■□□□□ 0.2
AC011840.1-201ENST00000582291 FZD9O00144 591 aa16.27■□□□□ 0.2
AC011840.1-201ENST00000582291 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
AC011840.1-201ENST00000582291 MYBBP1AQ9BQG0 1328 aaKnown RBP16.26■□□□□ 0.19
AC011840.1-201ENST00000582291 COPS6Q7L5N1 327 aa16.26■□□□□ 0.19
AC011840.1-201ENST00000582291 RPGRQ92834 1020 aaKnown RBP16.26■□□□□ 0.19
AC011840.1-201ENST00000582291 PSMD1Q99460 953 aa16.26■□□□□ 0.19
AC011840.1-201ENST00000582291 LAMB2P55268 1798 aa16.26■□□□□ 0.19
AC011840.1-201ENST00000582291 IBTKQ9P2D0 1353 aaPredicted RBP16.26■□□□□ 0.19
AC011840.1-201ENST00000582291 TAF1P21675 1872 aa16.25■□□□□ 0.19
AC011840.1-201ENST00000582291 CHL1O00533 1208 aa16.25■□□□□ 0.19
AC011840.1-201ENST00000582291 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
AC011840.1-201ENST00000582291 PPP1R42Q7Z4L9 355 aa16.25■□□□□ 0.19
AC011840.1-201ENST00000582291 ZNF428Q96B54 188 aa16.25■□□□□ 0.19
AC011840.1-201ENST00000582291 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
AC011840.1-201ENST00000582291 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
AC011840.1-201ENST00000582291 RIC1Q4ADV7 1423 aa16.25■□□□□ 0.19
AC011840.1-201ENST00000582291 ANKRD36CQ5JPF3 1778 aa16.25■□□□□ 0.19
AC011840.1-201ENST00000582291 IQCA1LA6NCM1 817 aa16.24■□□□□ 0.19
AC011840.1-201ENST00000582291 EAPPQ56P03 285 aaPredicted RBP16.24■□□□□ 0.19
AC011840.1-201ENST00000582291 XAGE3Q8WTP9 111 aa16.24■□□□□ 0.19
AC011840.1-201ENST00000582291 RBM17Q96I25 401 aaKnown RBP16.24■□□□□ 0.19
AC011840.1-201ENST00000582291 CRAMP1Q96RY5 1269 aa16.24■□□□□ 0.19
AC011840.1-201ENST00000582291 LAS1LQ9Y4W2 734 aaKnown RBP16.24■□□□□ 0.19
AC011840.1-201ENST00000582291 ADAMTSL1Q8N6G6 1762 aa16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 RNF123Q5XPI4 1314 aa16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 PASKQ96RG2 1323 aa16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 LTBP1Q14766 1721 aa16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 PPEF1O14829 653 aaPredicted RBP16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 ITGBL1O95965 494 aaPredicted RBP16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 SLC10A5Q5PT55 438 aa16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 LDHDQ86WU2 507 aa16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 RUNDC1Q96C34 613 aa16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 MKRN1Q9UHC7 482 aaKnown RBP16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 HACL1Q9UJ83 578 aa16.23■□□□□ 0.19
AC011840.1-201ENST00000582291 EPHX2P34913 555 aa16.22■□□□□ 0.19
AC011840.1-201ENST00000582291 LMOD3Q0VAK6 560 aa16.22■□□□□ 0.19
AC011840.1-201ENST00000582291 CC2D2BQ6DHV5 1058 aa16.22■□□□□ 0.19
AC011840.1-201ENST00000582291 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
AC011840.1-201ENST00000582291 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
AC011840.1-201ENST00000582291 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
AC011840.1-201ENST00000582291 HSPA1AP0DMV8 641 aaKnown RBP16.21■□□□□ 0.19
AC011840.1-201ENST00000582291 HSPA1BP0DMV9 641 aaKnown RBP16.21■□□□□ 0.19
AC011840.1-201ENST00000582291 HCLS1P14317 486 aaPredicted RBP16.21■□□□□ 0.19
AC011840.1-201ENST00000582291 NLRP10Q86W26 655 aa16.21■□□□□ 0.19
AC011840.1-201ENST00000582291 JDP2Q8WYK2 163 aa16.21■□□□□ 0.19
AC011840.1-201ENST00000582291 GJA3Q9Y6H8 435 aa16.21■□□□□ 0.19
AC011840.1-201ENST00000582291 ABCC4O15439 1325 aa16.2■□□□□ 0.18
AC011840.1-201ENST00000582291 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
AC011840.1-201ENST00000582291 MAP1SQ66K74 1059 aaPredicted RBP16.2■□□□□ 0.18
AC011840.1-201ENST00000582291 GPC2Q8N158 579 aa16.2■□□□□ 0.18
AC011840.1-201ENST00000582291 LARGE2Q8N3Y3 721 aa16.2■□□□□ 0.18
AC011840.1-201ENST00000582291 DDX21Q9NR30 783 aaKnown RBP eCLIP16.2■□□□□ 0.18
AC011840.1-201ENST00000582291 CHPF2Q9P2E5 772 aa16.2■□□□□ 0.18
AC011840.1-201ENST00000582291 WDR43Q15061 677 aaKnown RBP eCLIP16.19■□□□□ 0.18
AC011840.1-201ENST00000582291 EPS15P42566 896 aa16.18■□□□□ 0.18
AC011840.1-201ENST00000582291 EIF6P56537 245 aaKnown RBP16.18■□□□□ 0.18
AC011840.1-201ENST00000582291 AOC3Q16853 763 aa16.18■□□□□ 0.18
AC011840.1-201ENST00000582291 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
AC011840.1-201ENST00000582291 SCNN1DP51172 638 aa16.17■□□□□ 0.18
AC011840.1-201ENST00000582291 FMR1Q06787 632 aaKnown RBP eCLIP16.17■□□□□ 0.18
AC011840.1-201ENST00000582291 CNTROBQ8N137 903 aa16.17■□□□□ 0.18
AC011840.1-201ENST00000582291 PRKRIP1Q9H875 184 aaPredicted RBP16.17■□□□□ 0.18
AC011840.1-201ENST00000582291 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
AC011840.1-201ENST00000582291 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
AC011840.1-201ENST00000582291 PPIP5K2O43314 1243 aa16.16■□□□□ 0.18
AC011840.1-201ENST00000582291 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
AC011840.1-201ENST00000582291 HDGFL1Q5TGJ6 251 aa16.16■□□□□ 0.18
AC011840.1-201ENST00000582291 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
AC011840.1-201ENST00000582291 CNTNAP1P78357 1384 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 COL4A1P02462 1669 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 TMEM88BA6NKF7 163 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 ATP5J2-PTCD1G3V325 749 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 VEGFBP49765 207 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 GRIPAP1Q4V328 841 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 DUSP27Q5VZP5 1158 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 PNMA8AQ86V59 439 aaPredicted RBP16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 SP8Q8IXZ3 490 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 NIM1KQ8IY84 436 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 SH3TC1Q8TE82 1336 aa16.15■□□□□ 0.18
AC011840.1-201ENST00000582291 APAF1O14727 1248 aa16.14■□□□□ 0.17
AC011840.1-201ENST00000582291 BBOX1O75936 387 aa16.14■□□□□ 0.17
AC011840.1-201ENST00000582291 ZNF853P0CG23 659 aa16.14■□□□□ 0.17
AC011840.1-201ENST00000582291 CXCL9Q07325 125 aa16.14■□□□□ 0.17
AC011840.1-201ENST00000582291 ANKRD13DQ6ZTN6 518 aa16.14■□□□□ 0.17
AC011840.1-201ENST00000582291 PLBD2Q8NHP8 589 aa16.14■□□□□ 0.17
AC011840.1-201ENST00000582291 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
AC011840.1-201ENST00000582291 ISCA1Q9BUE6 129 aa16.14■□□□□ 0.17
AC011840.1-201ENST00000582291 RTFDC1Q9BY42 306 aaPredicted RBP16.14■□□□□ 0.17
AC011840.1-201ENST00000582291 GRAPQ13588 217 aa16.13■□□□□ 0.17
AC011840.1-201ENST00000582291 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
AC011840.1-201ENST00000582291 MPNDQ8N594 471 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms