RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.34
SNX11-210ENST00000582104 EPHX2P34913 555 aa17.2■□□□□ 0.34
SNX11-210ENST00000582104 PDE6BP35913 854 aa17.2■□□□□ 0.34
SNX11-210ENST00000582104 GNAI1P63096 354 aa17.2■□□□□ 0.34
SNX11-210ENST00000582104 CALD1Q05682 793 aaKnown RBP17.2■□□□□ 0.34
SNX11-210ENST00000582104 BICDL1Q6ZP65 573 aa17.2■□□□□ 0.34
SNX11-210ENST00000582104 CAPNS2Q96L46 248 aa17.2■□□□□ 0.34
SNX11-210ENST00000582104 BRIP1Q9BX63 1249 aa17.2■□□□□ 0.34
SNX11-210ENST00000582104 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
SNX11-210ENST00000582104 CASP8AP2Q9UKL3 1982 aa17.19■□□□□ 0.34
SNX11-210ENST00000582104 SLC39A6Q13433 755 aa17.18■□□□□ 0.34
SNX11-210ENST00000582104 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
SNX11-210ENST00000582104 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
SNX11-210ENST00000582104 GPR101Q96P66 508 aaPredicted RBP17.18■□□□□ 0.34
SNX11-210ENST00000582104 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
SNX11-210ENST00000582104 SCN7AQ01118 1682 aa17.17■□□□□ 0.34
SNX11-210ENST00000582104 ECE1P42892 770 aa17.17■□□□□ 0.34
SNX11-210ENST00000582104 GRM1Q13255 1194 aa17.17■□□□□ 0.34
SNX11-210ENST00000582104 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
SNX11-210ENST00000582104 SOGA3Q5TF21 947 aa17.17■□□□□ 0.34
SNX11-210ENST00000582104 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
SNX11-210ENST00000582104 PRPF40BQ6NWY9 871 aaKnown RBP17.17■□□□□ 0.34
SNX11-210ENST00000582104 PAXIP1Q6ZW49 1069 aaPredicted RBP17.17■□□□□ 0.34
SNX11-210ENST00000582104 PNMA8AQ86V59 439 aaPredicted RBP17.17■□□□□ 0.34
SNX11-210ENST00000582104 DDX21Q9NR30 783 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX11-210ENST00000582104 RNF123Q5XPI4 1314 aa17.17■□□□□ 0.34
SNX11-210ENST00000582104 BTBD11A6QL63 1104 aa17.16■□□□□ 0.34
SNX11-210ENST00000582104 TBC1D9BQ66K14 1250 aa17.16■□□□□ 0.34
SNX11-210ENST00000582104 CNKSR1Q969H4 720 aa17.16■□□□□ 0.34
SNX11-210ENST00000582104 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
SNX11-210ENST00000582104 EXOSC9Q06265 439 aaKnown RBP17.15■□□□□ 0.34
SNX11-210ENST00000582104 BABAM1Q9NWV8 329 aa17.15■□□□□ 0.34
SNX11-210ENST00000582104 TRPM7Q96QT4 1865 aa17.15■□□□□ 0.34
SNX11-210ENST00000582104 FMR1Q06787 632 aaKnown RBP eCLIP17.14■□□□□ 0.33
SNX11-210ENST00000582104 STYK1Q6J9G0 422 aa17.14■□□□□ 0.33
SNX11-210ENST00000582104 TSPYL6Q8N831 410 aa17.14■□□□□ 0.33
SNX11-210ENST00000582104 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
SNX11-210ENST00000582104 UBR2Q8IWV8 1755 aa17.13■□□□□ 0.33
SNX11-210ENST00000582104 EIF4A1P60842 406 aaKnown RBP17.13■□□□□ 0.33
SNX11-210ENST00000582104 DGKZQ13574 1117 aa17.13■□□□□ 0.33
SNX11-210ENST00000582104 ZNF790Q6PG37 636 aa17.13■□□□□ 0.33
SNX11-210ENST00000582104 AOC2O75106 756 aa17.12■□□□□ 0.33
SNX11-210ENST00000582104 SRGNP10124 158 aa17.12■□□□□ 0.33
SNX11-210ENST00000582104 CANXP27824 592 aaKnown RBP17.12■□□□□ 0.33
SNX11-210ENST00000582104 CCDC93Q567U6 631 aa17.12■□□□□ 0.33
SNX11-210ENST00000582104 C7orf43Q8WVR3 580 aa17.12■□□□□ 0.33
SNX11-210ENST00000582104 ZNF277Q9NRM2 450 aaPredicted RBP17.12■□□□□ 0.33
SNX11-210ENST00000582104 ELL2O00472 640 aaPredicted RBP17.11■□□□□ 0.33
SNX11-210ENST00000582104 MAP2K2P36507 400 aa17.11■□□□□ 0.33
SNX11-210ENST00000582104 EIF5P55010 431 aaKnown RBP17.11■□□□□ 0.33
SNX11-210ENST00000582104 MASTLQ96GX5 879 aa17.11■□□□□ 0.33
SNX11-210ENST00000582104 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
SNX11-210ENST00000582104 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
SNX11-210ENST00000582104 CA12O43570 354 aa17.1■□□□□ 0.33
SNX11-210ENST00000582104 FKBP4Q02790 459 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNX11-210ENST00000582104 PRPF38BQ5VTL8 546 aaKnown RBP17.1■□□□□ 0.33
SNX11-210ENST00000582104 TLL2Q9Y6L7 1015 aa17.1■□□□□ 0.33
SNX11-210ENST00000582104 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
SNX11-210ENST00000582104 FZD9O00144 591 aa17.09■□□□□ 0.33
SNX11-210ENST00000582104 CST9Q5W186 159 aa17.09■□□□□ 0.33
SNX11-210ENST00000582104 CNBD1Q8NA66 436 aa17.09■□□□□ 0.33
SNX11-210ENST00000582104 A0A087WZG4 1122 aa17.08■□□□□ 0.32
SNX11-210ENST00000582104 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
SNX11-210ENST00000582104 GPC2Q8N158 579 aa17.08■□□□□ 0.32
SNX11-210ENST00000582104 VAMP4O75379 141 aa17.07■□□□□ 0.32
SNX11-210ENST00000582104 SOX10P56693 466 aa17.07■□□□□ 0.32
SNX11-210ENST00000582104 ST5P78524 1137 aa17.07■□□□□ 0.32
SNX11-210ENST00000582104 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
SNX11-210ENST00000582104 BCORQ6W2J9 1755 aa17.07■□□□□ 0.32
SNX11-210ENST00000582104 TRAF5O00463 557 aa17.06■□□□□ 0.32
SNX11-210ENST00000582104 NPHP1O15259 732 aa17.06■□□□□ 0.32
SNX11-210ENST00000582104 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
SNX11-210ENST00000582104 OLFM4Q6UX06 510 aa17.06■□□□□ 0.32
SNX11-210ENST00000582104 IARSP41252 1262 aaKnown RBP17.05■□□□□ 0.32
SNX11-210ENST00000582104 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
SNX11-210ENST00000582104 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
SNX11-210ENST00000582104 TBC1D2BQ9UPU7 963 aa17.05■□□□□ 0.32
SNX11-210ENST00000582104 TCERG1O14776 1098 aaKnown RBP17.04■□□□□ 0.32
SNX11-210ENST00000582104 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
SNX11-210ENST00000582104 SETDB2Q96T68 719 aa17.04■□□□□ 0.32
SNX11-210ENST00000582104 STARD3NLO95772 234 aa17.03■□□□□ 0.32
SNX11-210ENST00000582104 SAPCD2Q86UD0 394 aa17.03■□□□□ 0.32
SNX11-210ENST00000582104 RTKN2Q8IZC4 609 aa17.03■□□□□ 0.32
SNX11-210ENST00000582104 NECTIN2Q92692 538 aa17.03■□□□□ 0.32
SNX11-210ENST00000582104 ZNF330Q9Y3S2 320 aaPredicted RBP17.03■□□□□ 0.32
SNX11-210ENST00000582104 COL4A5P29400 1685 aa17.03■□□□□ 0.32
SNX11-210ENST00000582104 SNRPA1P09661 255 aaKnown RBP17.02■□□□□ 0.32
SNX11-210ENST00000582104 NPR1P16066 1061 aa17.02■□□□□ 0.32
SNX11-210ENST00000582104 LMOD1P29536 600 aaPredicted RBP17.02■□□□□ 0.32
SNX11-210ENST00000582104 SCNN1DP51172 638 aa17.02■□□□□ 0.32
SNX11-210ENST00000582104 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.32
SNX11-210ENST00000582104 CIAPIN1Q6FI81 312 aa17.02■□□□□ 0.32
SNX11-210ENST00000582104 RCAN3Q9UKA8 241 aa17.02■□□□□ 0.32
SNX11-210ENST00000582104 USP16Q9Y5T5 823 aa17.02■□□□□ 0.32
SNX11-210ENST00000582104 GJA3Q9Y6H8 435 aa17.02■□□□□ 0.32
SNX11-210ENST00000582104 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.31
SNX11-210ENST00000582104 CAMTA2O94983 1202 aa17.01■□□□□ 0.31
SNX11-210ENST00000582104 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
SNX11-210ENST00000582104 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
SNX11-210ENST00000582104 EPS15P42566 896 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms