RNA–Protein interactions for RNA: ENST00000581973.6

SPECC1-216, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-216ENST00000581973 ZNF34Q8IZ26 560 aa20.32■□□□□ 0.84
SPECC1-216ENST00000581973 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
SPECC1-216ENST00000581973 GNAI1P63096 354 aa20.31■□□□□ 0.84
SPECC1-216ENST00000581973 AIMP1Q12904 312 aaKnown RBP20.31■□□□□ 0.84
SPECC1-216ENST00000581973 KRT24Q2M2I5 525 aa20.31■□□□□ 0.84
SPECC1-216ENST00000581973 PARP10Q53GL7 1025 aa20.31■□□□□ 0.84
SPECC1-216ENST00000581973 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
SPECC1-216ENST00000581973 MBIPQ9NS73 344 aa20.31■□□□□ 0.84
SPECC1-216ENST00000581973 HOXB7P09629 217 aa20.3■□□□□ 0.84
SPECC1-216ENST00000581973 PDIA6Q15084 440 aa20.3■□□□□ 0.84
SPECC1-216ENST00000581973 PROSER3Q2NL68 480 aa20.3■□□□□ 0.84
SPECC1-216ENST00000581973 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
SPECC1-216ENST00000581973 RBM17Q96I25 401 aaKnown RBP20.3■□□□□ 0.84
SPECC1-216ENST00000581973 IQCA1LA6NCM1 817 aa20.29■□□□□ 0.84
SPECC1-216ENST00000581973 TCERG1O14776 1098 aaKnown RBP20.29■□□□□ 0.84
SPECC1-216ENST00000581973 NTSR2O95665 410 aa20.29■□□□□ 0.84
SPECC1-216ENST00000581973 ZNF853P0CG23 659 aa20.29■□□□□ 0.84
SPECC1-216ENST00000581973 IARSP41252 1262 aaKnown RBP20.29■□□□□ 0.84
SPECC1-216ENST00000581973 IBTKQ9P2D0 1353 aaPredicted RBP20.29■□□□□ 0.84
SPECC1-216ENST00000581973 IFFO2Q5TF58 517 aa20.28■□□□□ 0.84
SPECC1-216ENST00000581973 HDGFL1Q5TGJ6 251 aa20.28■□□□□ 0.84
SPECC1-216ENST00000581973 CC2D2BQ6DHV5 1058 aa20.28■□□□□ 0.84
SPECC1-216ENST00000581973 COPS6Q7L5N1 327 aa20.28■□□□□ 0.84
SPECC1-216ENST00000581973 JDP2Q8WYK2 163 aa20.28■□□□□ 0.84
SPECC1-216ENST00000581973 NLRP3Q96P20 1036 aa20.28■□□□□ 0.84
SPECC1-216ENST00000581973 UTP14AQ9BVJ6 771 aaKnown RBP20.28■□□□□ 0.84
SPECC1-216ENST00000581973 HSP90AB3PQ58FF7 597 aa20.27■□□□□ 0.84
SPECC1-216ENST00000581973 CHADLQ6NUI6 762 aa20.27■□□□□ 0.84
SPECC1-216ENST00000581973 LRP10Q7Z4F1 713 aa20.27■□□□□ 0.84
SPECC1-216ENST00000581973 XAGE3Q8WTP9 111 aa20.27■□□□□ 0.84
SPECC1-216ENST00000581973 TMX4Q9H1E5 349 aaPredicted RBP20.27■□□□□ 0.84
SPECC1-216ENST00000581973 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.83
SPECC1-216ENST00000581973 HOXA10P31260 410 aaPredicted RBP20.26■□□□□ 0.83
SPECC1-216ENST00000581973 DUSP27Q5VZP5 1158 aa20.26■□□□□ 0.83
SPECC1-216ENST00000581973 CRAMP1Q96RY5 1269 aa20.26■□□□□ 0.83
SPECC1-216ENST00000581973 DDX21Q9NR30 783 aaKnown RBP eCLIP20.26■□□□□ 0.83
SPECC1-216ENST00000581973 CHPF2Q9P2E5 772 aa20.26■□□□□ 0.83
SPECC1-216ENST00000581973 CEP350Q5VT06 3117 aa20.26■□□□□ 0.83
SPECC1-216ENST00000581973 PPEF1O14829 653 aaPredicted RBP20.25■□□□□ 0.83
SPECC1-216ENST00000581973 CCDC27Q2M243 656 aa20.25■□□□□ 0.83
SPECC1-216ENST00000581973 EAPPQ56P03 285 aaPredicted RBP20.25■□□□□ 0.83
SPECC1-216ENST00000581973 PSMD1Q99460 953 aa20.25■□□□□ 0.83
SPECC1-216ENST00000581973 RIC1Q4ADV7 1423 aa20.25■□□□□ 0.83
SPECC1-216ENST00000581973 POTEIP0CG38 1075 aa20.24■□□□□ 0.83
SPECC1-216ENST00000581973 POTEJP0CG39 1038 aa20.24■□□□□ 0.83
SPECC1-216ENST00000581973 C3orf67Q6ZVT6 689 aa20.24■□□□□ 0.83
SPECC1-216ENST00000581973 L3MBTL3Q96JM7 780 aaPredicted RBP20.24■□□□□ 0.83
SPECC1-216ENST00000581973 TAF1DQ9H5J8 278 aaPredicted RBP20.24■□□□□ 0.83
SPECC1-216ENST00000581973 HACL1Q9UJ83 578 aa20.24■□□□□ 0.83
SPECC1-216ENST00000581973 CLEC11AQ9Y240 323 aa20.24■□□□□ 0.83
SPECC1-216ENST00000581973 EIF6P56537 245 aaKnown RBP20.23■□□□□ 0.83
SPECC1-216ENST00000581973 GRIPAP1Q4V328 841 aa20.23■□□□□ 0.83
SPECC1-216ENST00000581973 JMYQ8N9B5 988 aa20.23■□□□□ 0.83
SPECC1-216ENST00000581973 DBF4Q9UBU7 674 aaPredicted RBP20.23■□□□□ 0.83
SPECC1-216ENST00000581973 FZD9O00144 591 aa20.22■□□□□ 0.83
SPECC1-216ENST00000581973 TCIRG1Q13488 830 aa20.22■□□□□ 0.83
SPECC1-216ENST00000581973 LDHDQ86WU2 507 aa20.22■□□□□ 0.83
SPECC1-216ENST00000581973 WWC1Q8IX03 1113 aa20.22■□□□□ 0.83
SPECC1-216ENST00000581973 LARGE2Q8N3Y3 721 aa20.22■□□□□ 0.83
SPECC1-216ENST00000581973 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
SPECC1-216ENST00000581973 GJA3Q9Y6H8 435 aa20.22■□□□□ 0.83
SPECC1-216ENST00000581973 NCBP3Q53F19 620 aaKnown RBP20.21■□□□□ 0.83
SPECC1-216ENST00000581973 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
SPECC1-216ENST00000581973 NLRP10Q86W26 655 aa20.21■□□□□ 0.83
SPECC1-216ENST00000581973 FAM9BQ8IZU0 186 aa20.21■□□□□ 0.83
SPECC1-216ENST00000581973 RNF123Q5XPI4 1314 aa20.21■□□□□ 0.83
SPECC1-216ENST00000581973 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
SPECC1-216ENST00000581973 EPHX2P34913 555 aa20.2■□□□□ 0.82
SPECC1-216ENST00000581973 ZNF428Q96B54 188 aa20.2■□□□□ 0.82
SPECC1-216ENST00000581973 HYPKQ9NX55 129 aa20.2■□□□□ 0.82
SPECC1-216ENST00000581973 ELL2O00472 640 aaPredicted RBP20.19■□□□□ 0.82
SPECC1-216ENST00000581973 NIM1KQ8IY84 436 aa20.19■□□□□ 0.82
SPECC1-216ENST00000581973 GPC2Q8N158 579 aa20.19■□□□□ 0.82
SPECC1-216ENST00000581973 IL16Q14005 1332 aa20.19■□□□□ 0.82
SPECC1-216ENST00000581973 SH3TC1Q8TE82 1336 aa20.19■□□□□ 0.82
SPECC1-216ENST00000581973 SCN4AP35499 1836 aa20.18■□□□□ 0.82
SPECC1-216ENST00000581973 PPIP5K2O43314 1243 aa20.18■□□□□ 0.82
SPECC1-216ENST00000581973 LMOD1P29536 600 aaPredicted RBP20.18■□□□□ 0.82
SPECC1-216ENST00000581973 ANKRD13DQ6ZTN6 518 aa20.18■□□□□ 0.82
SPECC1-216ENST00000581973 DDX46Q7L014 1031 aaKnown RBP20.18■□□□□ 0.82
SPECC1-216ENST00000581973 SLC51AQ86UW1 340 aa20.18■□□□□ 0.82
SPECC1-216ENST00000581973 C8orf58Q8NAV2 365 aa20.18■□□□□ 0.82
SPECC1-216ENST00000581973 PLBD2Q8NHP8 589 aa20.18■□□□□ 0.82
SPECC1-216ENST00000581973 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
SPECC1-216ENST00000581973 ATP6V0A2Q9Y487 856 aa20.18■□□□□ 0.82
SPECC1-216ENST00000581973 ABCC4O15439 1325 aa20.18■□□□□ 0.82
SPECC1-216ENST00000581973 LAMB2P55268 1798 aa20.18■□□□□ 0.82
SPECC1-216ENST00000581973 PNMA8AQ86V59 439 aaPredicted RBP20.17■□□□□ 0.82
SPECC1-216ENST00000581973 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
SPECC1-216ENST00000581973 CREBZFQ9NS37 354 aa20.17■□□□□ 0.82
SPECC1-216ENST00000581973 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
SPECC1-216ENST00000581973 SNED1Q8TER0 1413 aa20.17■□□□□ 0.82
SPECC1-216ENST00000581973 BBOX1O75936 387 aa20.16■□□□□ 0.82
SPECC1-216ENST00000581973 SUPT20HQ8NEM7 779 aa20.16■□□□□ 0.82
SPECC1-216ENST00000581973 MKRN1Q9UHC7 482 aaKnown RBP20.16■□□□□ 0.82
SPECC1-216ENST00000581973 ATP5J2-PTCD1G3V325 749 aa20.15■□□□□ 0.82
SPECC1-216ENST00000581973 DPP8Q6V1X1 898 aaPredicted RBP20.15■□□□□ 0.82
SPECC1-216ENST00000581973 AOC3Q16853 763 aa20.14■□□□□ 0.81
SPECC1-216ENST00000581973 CCDC30Q5VVM6 783 aa20.14■□□□□ 0.81
SPECC1-216ENST00000581973 SP8Q8IXZ3 490 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms