RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 RNF123Q5XPI4 1314 aa8.54□□□□□ -1.04
NF1-221ENST00000581790 DLG5Q8TDM6 1919 aa8.53□□□□□ -1.04
NF1-221ENST00000581790 SLC35F4A4IF30 521 aa8.53□□□□□ -1.04
NF1-221ENST00000581790 FIGNL2A6NMB9 653 aa8.53□□□□□ -1.04
NF1-221ENST00000581790 MSTNO14793 375 aa8.53□□□□□ -1.04
NF1-221ENST00000581790 ITGA6P23229 1130 aa8.53□□□□□ -1.04
NF1-221ENST00000581790 TNNT2P45379 298 aaPredicted RBP8.53□□□□□ -1.04
NF1-221ENST00000581790 BPHLQ86WA6 291 aaPredicted RBP8.53□□□□□ -1.04
NF1-221ENST00000581790 VWA5B2Q8N398 1253 aa8.53□□□□□ -1.04
NF1-221ENST00000581790 KRI1Q8N9T8 703 aaKnown RBP8.53□□□□□ -1.04
NF1-221ENST00000581790 C1QTNF2Q9BXJ5 285 aa8.53□□□□□ -1.04
NF1-221ENST00000581790 NALCNQ8IZF0 1738 aa8.53□□□□□ -1.04
NF1-221ENST00000581790 FMN2Q9NZ56 1722 aa8.53□□□□□ -1.04
NF1-221ENST00000581790 EDC4Q6P2E9 1401 aaKnown RBP8.53□□□□□ -1.04
NF1-221ENST00000581790 CDC14CA4D256 554 aa8.52□□□□□ -1.05
NF1-221ENST00000581790 LTKP29376 864 aa8.52□□□□□ -1.05
NF1-221ENST00000581790 MTHFSP49914 203 aa8.52□□□□□ -1.05
NF1-221ENST00000581790 PLA2G4EQ3MJ16 856 aa8.52□□□□□ -1.05
NF1-221ENST00000581790 CABP1Q9NZU7 370 aa8.52□□□□□ -1.05
NF1-221ENST00000581790 RCAN3Q9UKA8 241 aa8.52□□□□□ -1.05
NF1-221ENST00000581790 MAP4K5Q9Y4K4 846 aa8.52□□□□□ -1.05
NF1-221ENST00000581790 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.05
NF1-221ENST00000581790 CPSF1Q10570 1443 aaKnown RBP8.52□□□□□ -1.05
NF1-221ENST00000581790 PTCH1Q13635 1447 aa8.52□□□□□ -1.05
NF1-221ENST00000581790 CFAP99D6REC4 459 aa8.51□□□□□ -1.05
NF1-221ENST00000581790 ADAMTS2O95450 1211 aa8.51□□□□□ -1.05
NF1-221ENST00000581790 LYPD4Q6UWN0 246 aa8.51□□□□□ -1.05
NF1-221ENST00000581790 SV2AQ7L0J3 742 aa8.51□□□□□ -1.05
NF1-221ENST00000581790 CCDC146Q8IYE0 955 aa8.51□□□□□ -1.05
NF1-221ENST00000581790 SPOCK3Q9BQ16 436 aa8.51□□□□□ -1.05
NF1-221ENST00000581790 GGNBP2Q9H3C7 697 aa8.51□□□□□ -1.05
NF1-221ENST00000581790 TBX22Q9Y458 520 aa8.51□□□□□ -1.05
NF1-221ENST00000581790 IQSEC2Q5JU85 1478 aa8.51□□□□□ -1.05
NF1-221ENST00000581790 ROBO2Q9HCK4 1378 aa8.5□□□□□ -1.05
NF1-221ENST00000581790 FYB1O15117 783 aa8.5□□□□□ -1.05
NF1-221ENST00000581790 RRP1P56182 461 aaKnown RBP8.5□□□□□ -1.05
NF1-221ENST00000581790 CCDC116Q8IYX3 515 aa8.5□□□□□ -1.05
NF1-221ENST00000581790 PTPRUQ92729 1446 aa8.5□□□□□ -1.05
NF1-221ENST00000581790 RUNDC1Q96C34 613 aa8.5□□□□□ -1.05
NF1-221ENST00000581790 NUDT16Q96DE0 195 aaKnown RBP8.5□□□□□ -1.05
NF1-221ENST00000581790 COL3A1P02461 1466 aaPredicted RBP8.5□□□□□ -1.05
NF1-221ENST00000581790 ZNF521Q96K83 1311 aa8.5□□□□□ -1.05
NF1-221ENST00000581790 PIK3R4Q99570 1358 aa8.49□□□□□ -1.05
NF1-221ENST00000581790 APAF1O14727 1248 aa8.49□□□□□ -1.05
NF1-221ENST00000581790 SPINT1O43278 529 aa8.49□□□□□ -1.05
NF1-221ENST00000581790 ITGB2P05107 769 aa8.49□□□□□ -1.05
NF1-221ENST00000581790 SSTR3P32745 418 aaPredicted RBP8.49□□□□□ -1.05
NF1-221ENST00000581790 MAP3K10Q02779 954 aa8.49□□□□□ -1.05
NF1-221ENST00000581790 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
NF1-221ENST00000581790 TRMT44Q8IYL2 757 aaKnown RBP8.48□□□□□ -1.05
NF1-221ENST00000581790 DCAF5Q96JK2 942 aa8.48□□□□□ -1.05
NF1-221ENST00000581790 SLC26A8Q96RN1 970 aa8.48□□□□□ -1.05
NF1-221ENST00000581790 PNNQ9H307 717 aaKnown RBP8.48□□□□□ -1.05
NF1-221ENST00000581790 AMOTL2Q9Y2J4 779 aa8.48□□□□□ -1.05
NF1-221ENST00000581790 NKTRP30414 1462 aaKnown RBP8.48□□□□□ -1.05
NF1-221ENST00000581790 USP54Q70EL1 1684 aa8.48□□□□□ -1.05
NF1-221ENST00000581790 CDK12Q9NYV4 1490 aaPredicted RBP8.47□□□□□ -1.05
NF1-221ENST00000581790 E9PSI1 815 aa8.47□□□□□ -1.05
NF1-221ENST00000581790 PROCP04070 461 aa8.47□□□□□ -1.05
NF1-221ENST00000581790 SLFN5Q08AF3 891 aa8.47□□□□□ -1.05
NF1-221ENST00000581790 Q6ZVU0 165 aa8.47□□□□□ -1.05
NF1-221ENST00000581790 SH3RF1Q7Z6J0 888 aa8.47□□□□□ -1.05
NF1-221ENST00000581790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
NF1-221ENST00000581790 CELA2BP08218 269 aaPredicted RBP8.46□□□□□ -1.06
NF1-221ENST00000581790 U2AF1L5P0DN76 240 aaPredicted RBP8.46□□□□□ -1.06
NF1-221ENST00000581790 U2AF1Q01081 240 aaKnown RBP eCLIP8.46□□□□□ -1.06
NF1-221ENST00000581790 SRSF11Q05519 484 aaKnown RBP8.46□□□□□ -1.06
NF1-221ENST00000581790 CBLBQ13191 982 aa8.46□□□□□ -1.06
NF1-221ENST00000581790 DUSP27Q5VZP5 1158 aa8.46□□□□□ -1.06
NF1-221ENST00000581790 ANKLE2Q86XL3 938 aa8.46□□□□□ -1.06
NF1-221ENST00000581790 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.46□□□□□ -1.06
NF1-221ENST00000581790 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
NF1-221ENST00000581790 LRRC7Q96NW7 1537 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
NF1-221ENST00000581790 DIAPH1O60610 1272 aaKnown RBP8.45□□□□□ -1.06
NF1-221ENST00000581790 GJA5P36382 358 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 CCDC27Q2M243 656 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
NF1-221ENST00000581790 TRMT2AQ8IZ69 625 aaKnown RBP8.45□□□□□ -1.06
NF1-221ENST00000581790 TCP11L2Q8N4U5 519 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 COG3Q96JB2 828 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 CCDC136Q96JN2 1154 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 PRR36Q9H6K5 1346 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 MAPK8IP3Q9UPT6 1336 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 MARF1Q9Y4F3 1742 aaKnown RBP8.45□□□□□ -1.06
NF1-221ENST00000581790 PNPLA6Q8IY17 1366 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 LTN1O94822 1766 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 USP6P35125 1406 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 ANKARQ7Z5J8 1434 aa8.45□□□□□ -1.06
NF1-221ENST00000581790 PIK3C2AO00443 1686 aa8.44□□□□□ -1.06
NF1-221ENST00000581790 PHF20L1A8MW92 1017 aa8.44□□□□□ -1.06
NF1-221ENST00000581790 NEFMP07197 916 aa8.44□□□□□ -1.06
NF1-221ENST00000581790 B4GALNT3Q6L9W6 998 aa8.44□□□□□ -1.06
NF1-221ENST00000581790 WDR63Q8IWG1 891 aa8.44□□□□□ -1.06
NF1-221ENST00000581790 WWC1Q8IX03 1113 aa8.44□□□□□ -1.06
NF1-221ENST00000581790 GALNT6Q8NCL4 622 aa8.44□□□□□ -1.06
NF1-221ENST00000581790 NWD1Q149M9 1564 aa8.44□□□□□ -1.06
NF1-221ENST00000581790 GAS6Q14393 721 aa8.43□□□□□ -1.06
NF1-221ENST00000581790 PPP1R26Q5T8A7 1209 aaPredicted RBP8.43□□□□□ -1.06
NF1-221ENST00000581790 SH3BP5LQ7L8J4 393 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms