RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 USP16Q9Y5T5 823 aa15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 ERLIN1O75477 346 aa15.82■□□□□ 0.12
TRAPPC8-207ENST00000580104 U2AF2P26368 475 aaKnown RBP eCLIP15.82■□□□□ 0.127e-8■■■□□ 14.9
TRAPPC8-207ENST00000580104 HYPKQ9NX55 129 aa15.82■□□□□ 0.12
TRAPPC8-207ENST00000580104 ORC3Q9UBD5 711 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC8-207ENST00000580104 ZSCAN12O43309 604 aa15.82■□□□□ 0.12
TRAPPC8-207ENST00000580104 KIF6Q6ZMV9 814 aa15.82■□□□□ 0.12
TRAPPC8-207ENST00000580104 STRN4Q9NRL3 753 aa15.82■□□□□ 0.12
TRAPPC8-207ENST00000580104 CFAP65Q6ZU64 1925 aaKnown RBP15.82■□□□□ 0.12
TRAPPC8-207ENST00000580104 ABCC4O15439 1325 aa15.82■□□□□ 0.12
TRAPPC8-207ENST00000580104 EYA1Q99502 592 aa15.82■□□□□ 0.12
TRAPPC8-207ENST00000580104 NPHP3Q7Z494 1330 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 CHL1O00533 1208 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 EPB41L2O43491 1005 aaKnown RBP15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 KRT222Q8N1A0 295 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 MYRIPQ8NFW9 859 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 ZFP91Q96JP5 570 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 CASQ1P31415 396 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 TDO2P48775 406 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 CNNM3Q8NE01 707 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 DNAI1Q9UI46 699 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 RUFY3Q7L099 469 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 NOL10Q9BSC4 688 aaKnown RBP15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 ZSCAN16Q9H4T2 348 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 HMG20BQ9P0W2 317 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 NPATQ14207 1427 aa15.81■□□□□ 0.12
TRAPPC8-207ENST00000580104 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 ERVK-7P63135 1459 aa15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 ZMYM3Q14202 1370 aa15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 KIF4BQ2VIQ3 1234 aa15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 TRIM34Q9BYJ4 488 aa15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 MAGEC2Q9UBF1 373 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 ABCC1P33527 1531 aa15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 EIF3JO75822 258 aaKnown RBP15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 ZFYVE9O95405 1425 aa15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 LMOD1P29536 600 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 AMOTL1Q8IY63 956 aa15.8■□□□□ 0.12
TRAPPC8-207ENST00000580104 SIRT2Q8IXJ6 389 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 CCDC171Q6TFL3 1326 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 TAF3Q5VWG9 929 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 AIDAQ96BJ3 306 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 PLA2R1Q13018 1463 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 ZNF213O14771 459 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 ZNF500O60304 480 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 CAVIN2O95810 425 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 GNG11P61952 73 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 TXLNAP40222 546 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 METTL24Q5JXM2 366 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 CEP89Q96ST8 783 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 NACAP1Q9BZK3 213 aa15.79■□□□□ 0.12
TRAPPC8-207ENST00000580104 SGSM2O43147 1006 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 MARCKSP29966 332 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 BMS1Q14692 1282 aaKnown RBP15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 ZBTB3Q9H5J0 574 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 GRM8O00222 908 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 TOM1L2Q6ZVM7 507 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 UBAC1Q9BSL1 405 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 ZNHIT6Q9NWK9 470 aaKnown RBP15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 PHF8Q9UPP1 1060 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 AMOTQ4VCS5 1084 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 KCNH5Q8NCM2 988 aa15.78■□□□□ 0.12
TRAPPC8-207ENST00000580104 NSFL1CQ9UNZ2 370 aaKnown RBP15.77■□□□□ 0.12
TRAPPC8-207ENST00000580104 FAM227BQ96M60 508 aa15.77■□□□□ 0.12
TRAPPC8-207ENST00000580104 YTHDC2Q9H6S0 1430 aaKnown RBP15.77■□□□□ 0.12
TRAPPC8-207ENST00000580104 MAP3K19Q56UN5 1328 aa15.77■□□□□ 0.12
TRAPPC8-207ENST00000580104 NBPF7P0C2Y1 421 aaPredicted RBP15.77■□□□□ 0.11
TRAPPC8-207ENST00000580104 APOBRQ0VD83 1088 aa15.77■□□□□ 0.11
TRAPPC8-207ENST00000580104 ZSCAN25Q6NSZ9 544 aa15.77■□□□□ 0.11
TRAPPC8-207ENST00000580104 UBASH3AP57075 661 aa15.77■□□□□ 0.11
TRAPPC8-207ENST00000580104 SMAP1Q8IYB5 467 aaPredicted RBP15.77■□□□□ 0.11
TRAPPC8-207ENST00000580104 MRPS27Q92552 414 aaKnown RBP15.77■□□□□ 0.11
TRAPPC8-207ENST00000580104 CALCOCO1Q9P1Z2 691 aa15.77■□□□□ 0.11
TRAPPC8-207ENST00000580104 TERF1P54274 439 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 KDM5AP29375 1690 aaKnown RBP15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 KLF18A0A0U1RQI7 1052 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 G3V3G9 751 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 DCAF8Q5TAQ9 597 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 KLHDC4Q8TBB5 520 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 RTL1A6NKG5 1358 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 TTC41PQ6P2S7 1318 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 SLU7O95391 586 aaKnown RBP15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 COPS6Q7L5N1 327 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 KIF5CO60282 957 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 MPHOSPH8Q99549 860 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 CBX8Q9HC52 389 aa15.76■□□□□ 0.11
TRAPPC8-207ENST00000580104 ZNF518AQ6AHZ1 1483 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 JAKMIP3Q5VZ66 844 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 SYT10Q6XYQ8 523 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 XAGE3Q8WTP9 111 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 TSPYL1Q9H0U9 437 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 KDM5DQ9BY66 1539 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 RAD50Q92878 1312 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 HSPA4P34932 840 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 CDC37L1Q7L3B6 337 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 DEF6Q9H4E7 631 aa15.75■□□□□ 0.11
TRAPPC8-207ENST00000580104 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms