RNA–Protein interactions for RNA: ENST00000579066.1

CTC1-206, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-206ENST00000579066 XAGE3Q8WTP9 111 aa14.76□□□□□ -0.05
CTC1-206ENST00000579066 PRKRIP1Q9H875 184 aaPredicted RBP14.76□□□□□ -0.05
CTC1-206ENST00000579066 SNED1Q8TER0 1413 aa14.75□□□□□ -0.05
CTC1-206ENST00000579066 ANKRD36CQ5JPF3 1778 aa14.75□□□□□ -0.05
CTC1-206ENST00000579066 COL4A5P29400 1685 aa14.75□□□□□ -0.05
CTC1-206ENST00000579066 ALDH1B1P30837 517 aa14.75□□□□□ -0.05
CTC1-206ENST00000579066 RPGRQ92834 1020 aaKnown RBP14.75□□□□□ -0.05
CTC1-206ENST00000579066 KLRG1Q96E93 195 aa14.75□□□□□ -0.05
CTC1-206ENST00000579066 CHL1O00533 1208 aa14.74□□□□□ -0.05
CTC1-206ENST00000579066 LAMB2P55268 1798 aa14.74□□□□□ -0.05
CTC1-206ENST00000579066 IBTKQ9P2D0 1353 aaPredicted RBP14.73□□□□□ -0.05
CTC1-206ENST00000579066 IARSP41252 1262 aaKnown RBP14.73□□□□□ -0.05
CTC1-206ENST00000579066 PPP1R42Q7Z4L9 355 aa14.73□□□□□ -0.05
CTC1-206ENST00000579066 RTKN2Q8IZC4 609 aa14.73□□□□□ -0.05
CTC1-206ENST00000579066 BABAM1Q9NWV8 329 aa14.73□□□□□ -0.05
CTC1-206ENST00000579066 CHPF2Q9P2E5 772 aa14.73□□□□□ -0.05
CTC1-206ENST00000579066 HOXA10P31260 410 aaPredicted RBP14.72□□□□□ -0.05
CTC1-206ENST00000579066 UTP14AQ9BVJ6 771 aaKnown RBP14.72□□□□□ -0.05
CTC1-206ENST00000579066 RIC1Q4ADV7 1423 aa14.72□□□□□ -0.05
CTC1-206ENST00000579066 PPEF1O14829 653 aaPredicted RBP14.71□□□□□ -0.05
CTC1-206ENST00000579066 HCLS1P14317 486 aaPredicted RBP14.71□□□□□ -0.05
CTC1-206ENST00000579066 CCDC184Q52MB2 194 aa14.71□□□□□ -0.05
CTC1-206ENST00000579066 PARP10Q53GL7 1025 aa14.71□□□□□ -0.05
CTC1-206ENST00000579066 NLRP10Q86W26 655 aa14.71□□□□□ -0.05
CTC1-206ENST00000579066 RBM17Q96I25 401 aaKnown RBP14.71□□□□□ -0.05
CTC1-206ENST00000579066 DDX21Q9NR30 783 aaKnown RBP eCLIP14.71□□□□□ -0.05
CTC1-206ENST00000579066 TAF1P21675 1872 aa14.71□□□□□ -0.05
CTC1-206ENST00000579066 RNF123Q5XPI4 1314 aa14.7□□□□□ -0.06
CTC1-206ENST00000579066 APAF1O14727 1248 aa14.7□□□□□ -0.06
CTC1-206ENST00000579066 EAPPQ56P03 285 aaPredicted RBP14.7□□□□□ -0.06
CTC1-206ENST00000579066 HDGFL1Q5TGJ6 251 aa14.7□□□□□ -0.06
CTC1-206ENST00000579066 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
CTC1-206ENST00000579066 NLRP3Q96P20 1036 aa14.7□□□□□ -0.06
CTC1-206ENST00000579066 CRAMP1Q96RY5 1269 aa14.7□□□□□ -0.06
CTC1-206ENST00000579066 TAF1DQ9H5J8 278 aaPredicted RBP14.7□□□□□ -0.06
CTC1-206ENST00000579066 MBIPQ9NS73 344 aa14.7□□□□□ -0.06
CTC1-206ENST00000579066 ABCC4O15439 1325 aa14.69□□□□□ -0.06
CTC1-206ENST00000579066 SCN4AP35499 1836 aa14.69□□□□□ -0.06
CTC1-206ENST00000579066 FZD9O00144 591 aa14.69□□□□□ -0.06
CTC1-206ENST00000579066 TCIRG1Q13488 830 aa14.69□□□□□ -0.06
CTC1-206ENST00000579066 IFFO2Q5TF58 517 aa14.69□□□□□ -0.06
CTC1-206ENST00000579066 DUSP27Q5VZP5 1158 aa14.69□□□□□ -0.06
CTC1-206ENST00000579066 L3MBTL3Q96JM7 780 aaPredicted RBP14.69□□□□□ -0.06
CTC1-206ENST00000579066 ATP5J2-PTCD1G3V325 749 aa14.68□□□□□ -0.06
CTC1-206ENST00000579066 ELL2O00472 640 aaPredicted RBP14.68□□□□□ -0.06
CTC1-206ENST00000579066 SLC10A5Q5PT55 438 aa14.68□□□□□ -0.06
CTC1-206ENST00000579066 JMYQ8N9B5 988 aa14.68□□□□□ -0.06
CTC1-206ENST00000579066 PSMD1Q99460 953 aa14.68□□□□□ -0.06
CTC1-206ENST00000579066 TRMT112Q9UI30 125 aaKnown RBP14.68□□□□□ -0.06
CTC1-206ENST00000579066 GJA3Q9Y6H8 435 aa14.68□□□□□ -0.06
CTC1-206ENST00000579066 LTBP1Q14766 1721 aa14.68□□□□□ -0.06
CTC1-206ENST00000579066 DDX60Q8IY21 1712 aaKnown RBP14.67□□□□□ -0.06
CTC1-206ENST00000579066 CEP350Q5VT06 3117 aa14.67□□□□□ -0.06
CTC1-206ENST00000579066 HSP90AB3PQ58FF7 597 aa14.67□□□□□ -0.06
CTC1-206ENST00000579066 RTL5Q5HYW3 569 aaPredicted RBP14.67□□□□□ -0.06
CTC1-206ENST00000579066 LARGE2Q8N3Y3 721 aa14.67□□□□□ -0.06
CTC1-206ENST00000579066 CFAP44Q96MT7 982 aa14.67□□□□□ -0.06
CTC1-206ENST00000579066 HACL1Q9UJ83 578 aa14.67□□□□□ -0.06
CTC1-206ENST00000579066 CLEC11AQ9Y240 323 aa14.67□□□□□ -0.06
CTC1-206ENST00000579066 COL4A1P02462 1669 aa14.67□□□□□ -0.06
CTC1-206ENST00000579066 ADAMTSL1Q8N6G6 1762 aa14.66□□□□□ -0.06
CTC1-206ENST00000579066 IQCA1LA6NCM1 817 aa14.66□□□□□ -0.06
CTC1-206ENST00000579066 EPHX2P34913 555 aa14.66□□□□□ -0.06
CTC1-206ENST00000579066 AOC3Q16853 763 aa14.66□□□□□ -0.06
CTC1-206ENST00000579066 CC2D2BQ6DHV5 1058 aa14.66□□□□□ -0.06
CTC1-206ENST00000579066 JDP2Q8WYK2 163 aa14.66□□□□□ -0.06
CTC1-206ENST00000579066 MKRN1Q9UHC7 482 aaKnown RBP14.66□□□□□ -0.06
CTC1-206ENST00000579066 PPIP5K2O43314 1243 aa14.65□□□□□ -0.06
CTC1-206ENST00000579066 ZNF853P0CG23 659 aa14.65□□□□□ -0.06
CTC1-206ENST00000579066 EIF6P56537 245 aaKnown RBP14.65□□□□□ -0.06
CTC1-206ENST00000579066 ANKRD13DQ6ZTN6 518 aa14.65□□□□□ -0.06
CTC1-206ENST00000579066 LDHDQ86WU2 507 aa14.65□□□□□ -0.06
CTC1-206ENST00000579066 PLBD2Q8NHP8 589 aa14.65□□□□□ -0.06
CTC1-206ENST00000579066 FAM89AQ96GI7 184 aa14.65□□□□□ -0.06
CTC1-206ENST00000579066 PHAXQ9H814 394 aaKnown RBP14.65□□□□□ -0.06
CTC1-206ENST00000579066 DBF4Q9UBU7 674 aaPredicted RBP14.65□□□□□ -0.06
CTC1-206ENST00000579066 ATP6V0A2Q9Y487 856 aa14.65□□□□□ -0.06
CTC1-206ENST00000579066 SH3TC1Q8TE82 1336 aa14.65□□□□□ -0.06
CTC1-206ENST00000579066 MAP1SQ66K74 1059 aaPredicted RBP14.64□□□□□ -0.07
CTC1-206ENST00000579066 GPC2Q8N158 579 aa14.64□□□□□ -0.07
CTC1-206ENST00000579066 C8orf58Q8NAV2 365 aa14.64□□□□□ -0.07
CTC1-206ENST00000579066 ISCA1Q9BUE6 129 aa14.64□□□□□ -0.07
CTC1-206ENST00000579066 ITGBL1O95965 494 aaPredicted RBP14.63□□□□□ -0.07
CTC1-206ENST00000579066 HOXB7P09629 217 aa14.63□□□□□ -0.07
CTC1-206ENST00000579066 EPS15P42566 896 aa14.63□□□□□ -0.07
CTC1-206ENST00000579066 FMR1Q06787 632 aaKnown RBP eCLIP14.63□□□□□ -0.07
CTC1-206ENST00000579066 NIM1KQ8IY84 436 aa14.63□□□□□ -0.07
CTC1-206ENST00000579066 JARID2Q92833 1246 aaPredicted RBP14.63□□□□□ -0.07
CTC1-206ENST00000579066 IFT57Q9NWB7 429 aa14.63□□□□□ -0.07
CTC1-206ENST00000579066 PASKQ96RG2 1323 aa14.63□□□□□ -0.07
CTC1-206ENST00000579066 HSPA1AP0DMV8 641 aaKnown RBP14.62□□□□□ -0.07
CTC1-206ENST00000579066 HSPA1BP0DMV9 641 aaKnown RBP14.62□□□□□ -0.07
CTC1-206ENST00000579066 SCNN1DP51172 638 aa14.62□□□□□ -0.07
CTC1-206ENST00000579066 GRAPQ13588 217 aa14.62□□□□□ -0.07
CTC1-206ENST00000579066 COL13A1Q5TAT6 717 aaPredicted RBP14.62□□□□□ -0.07
CTC1-206ENST00000579066 DDX46Q7L014 1031 aaKnown RBP14.62□□□□□ -0.07
CTC1-206ENST00000579066 GRAPLQ8TC17 118 aaPredicted RBP14.62□□□□□ -0.07
CTC1-206ENST00000579066 CREBZFQ9NS37 354 aa14.62□□□□□ -0.07
CTC1-206ENST00000579066 HYPKQ9NX55 129 aa14.62□□□□□ -0.07
CTC1-206ENST00000579066 DUOX1Q9NRD9 1551 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms