RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 RIC1Q4ADV7 1423 aa18.18■□□□□ 0.5
PSMD11-207ENST00000578397 HOXB7P09629 217 aa18.18■□□□□ 0.5
PSMD11-207ENST00000578397 PROSER3Q2NL68 480 aa18.18■□□□□ 0.5
PSMD11-207ENST00000578397 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
PSMD11-207ENST00000578397 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
PSMD11-207ENST00000578397 DDX21Q9NR30 783 aaKnown RBP eCLIP18.18■□□□□ 0.5
PSMD11-207ENST00000578397 CEP350Q5VT06 3117 aa18.18■□□□□ 0.5
PSMD11-207ENST00000578397 ABCC12Q96J65 1359 aa18.17■□□□□ 0.5
PSMD11-207ENST00000578397 SLX4Q8IY92 1834 aa18.17■□□□□ 0.5
PSMD11-207ENST00000578397 ANXA1P04083 346 aa18.17■□□□□ 0.5
PSMD11-207ENST00000578397 HSP90AB3PQ58FF7 597 aa18.17■□□□□ 0.5
PSMD11-207ENST00000578397 RTKN2Q8IZC4 609 aa18.17■□□□□ 0.5
PSMD11-207ENST00000578397 FER1L6Q2WGJ9 1857 aa18.16■□□□□ 0.5
PSMD11-207ENST00000578397 NTSR2O95665 410 aa18.16■□□□□ 0.5
PSMD11-207ENST00000578397 HOXA10P31260 410 aaPredicted RBP18.16■□□□□ 0.5
PSMD11-207ENST00000578397 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
PSMD11-207ENST00000578397 COPS6Q7L5N1 327 aa18.16■□□□□ 0.5
PSMD11-207ENST00000578397 APAF1O14727 1248 aa18.15■□□□□ 0.5
PSMD11-207ENST00000578397 CALD1Q05682 793 aaKnown RBP18.15■□□□□ 0.5
PSMD11-207ENST00000578397 KRT24Q2M2I5 525 aa18.15■□□□□ 0.5
PSMD11-207ENST00000578397 CC2D2BQ6DHV5 1058 aa18.15■□□□□ 0.5
PSMD11-207ENST00000578397 SMC1BQ8NDV3 1235 aa18.15■□□□□ 0.5
PSMD11-207ENST00000578397 XAGE3Q8WTP9 111 aa18.15■□□□□ 0.5
PSMD11-207ENST00000578397 NECTIN2Q92692 538 aa18.15■□□□□ 0.5
PSMD11-207ENST00000578397 RPGRQ92834 1020 aaKnown RBP18.15■□□□□ 0.5
PSMD11-207ENST00000578397 UTP14AQ9BVJ6 771 aaKnown RBP18.15■□□□□ 0.5
PSMD11-207ENST00000578397 TNRC6CQ9HCJ0 1690 aaKnown RBP18.15■□□□□ 0.5
PSMD11-207ENST00000578397 NUP98P52948 1817 aa18.14■□□□□ 0.5
PSMD11-207ENST00000578397 AIMP1Q12904 312 aaKnown RBP18.14■□□□□ 0.49
PSMD11-207ENST00000578397 SLC10A5Q5PT55 438 aa18.14■□□□□ 0.49
PSMD11-207ENST00000578397 HDGFL1Q5TGJ6 251 aa18.14■□□□□ 0.49
PSMD11-207ENST00000578397 RNF123Q5XPI4 1314 aa18.14■□□□□ 0.49
PSMD11-207ENST00000578397 ARFGEF2Q9Y6D5 1785 aa18.14■□□□□ 0.49
PSMD11-207ENST00000578397 ZNF853P0CG23 659 aa18.13■□□□□ 0.49
PSMD11-207ENST00000578397 GRIPAP1Q4V328 841 aa18.13■□□□□ 0.49
PSMD11-207ENST00000578397 RBM17Q96I25 401 aaKnown RBP18.13■□□□□ 0.49
PSMD11-207ENST00000578397 NLRP3Q96P20 1036 aa18.13■□□□□ 0.49
PSMD11-207ENST00000578397 CRAMP1Q96RY5 1269 aa18.13■□□□□ 0.49
PSMD11-207ENST00000578397 CHPF2Q9P2E5 772 aa18.13■□□□□ 0.49
PSMD11-207ENST00000578397 DBF4Q9UBU7 674 aaPredicted RBP18.13■□□□□ 0.49
PSMD11-207ENST00000578397 POTECB2RU33 542 aa18.12■□□□□ 0.49
PSMD11-207ENST00000578397 TCIRG1Q13488 830 aa18.12■□□□□ 0.49
PSMD11-207ENST00000578397 MBIPQ9NS73 344 aa18.12■□□□□ 0.49
PSMD11-207ENST00000578397 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
PSMD11-207ENST00000578397 GNAI1P63096 354 aa18.11■□□□□ 0.49
PSMD11-207ENST00000578397 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
PSMD11-207ENST00000578397 OLFM4Q6UX06 510 aa18.11■□□□□ 0.49
PSMD11-207ENST00000578397 NLRP10Q86W26 655 aa18.11■□□□□ 0.49
PSMD11-207ENST00000578397 SYNE4Q8N205 404 aa18.11■□□□□ 0.49
PSMD11-207ENST00000578397 PSMD1Q99460 953 aa18.11■□□□□ 0.49
PSMD11-207ENST00000578397 ZNF277Q9NRM2 450 aaPredicted RBP18.11■□□□□ 0.49
PSMD11-207ENST00000578397 TIAM2Q8IVF5 1701 aa18.11■□□□□ 0.49
PSMD11-207ENST00000578397 CCDC88AQ3V6T2 1871 aa18.1■□□□□ 0.49
PSMD11-207ENST00000578397 DDNO94850 711 aaPredicted RBP18.1■□□□□ 0.49
PSMD11-207ENST00000578397 HYPKQ9NX55 129 aa18.1■□□□□ 0.49
PSMD11-207ENST00000578397 IARSP41252 1262 aaKnown RBP18.09■□□□□ 0.49
PSMD11-207ENST00000578397 ANKRD13DQ6ZTN6 518 aa18.09■□□□□ 0.49
PSMD11-207ENST00000578397 DNAJC5GQ8N7S2 189 aa18.09■□□□□ 0.49
PSMD11-207ENST00000578397 PLBD2Q8NHP8 589 aa18.09■□□□□ 0.49
PSMD11-207ENST00000578397 DICER1Q9UPY3 1922 aaKnown RBP18.09■□□□□ 0.49
PSMD11-207ENST00000578397 WDR90Q96KV7 1748 aa18.09■□□□□ 0.49
PSMD11-207ENST00000578397 SNED1Q8TER0 1413 aa18.08■□□□□ 0.49
PSMD11-207ENST00000578397 C3orf67Q6ZVT6 689 aa18.08■□□□□ 0.48
PSMD11-207ENST00000578397 CHMP4AQ9BY43 222 aa18.08■□□□□ 0.48
PSMD11-207ENST00000578397 TRMT112Q9UI30 125 aaKnown RBP18.08■□□□□ 0.48
PSMD11-207ENST00000578397 SH3TC1Q8TE82 1336 aa18.07■□□□□ 0.48
PSMD11-207ENST00000578397 IQCA1LA6NCM1 817 aa18.07■□□□□ 0.48
PSMD11-207ENST00000578397 PPEF1O14829 653 aaPredicted RBP18.07■□□□□ 0.48
PSMD11-207ENST00000578397 L3MBTL3Q96JM7 780 aaPredicted RBP18.07■□□□□ 0.48
PSMD11-207ENST00000578397 TMX4Q9H1E5 349 aaPredicted RBP18.07■□□□□ 0.48
PSMD11-207ENST00000578397 CACNA1SQ13698 1873 aa18.07■□□□□ 0.48
PSMD11-207ENST00000578397 ZNF316A6NFI3 1004 aaPredicted RBP18.06■□□□□ 0.48
PSMD11-207ENST00000578397 FZD9O00144 591 aa18.06■□□□□ 0.48
PSMD11-207ENST00000578397 JDP2Q8WYK2 163 aa18.06■□□□□ 0.48
PSMD11-207ENST00000578397 BBOX1O75936 387 aa18.05■□□□□ 0.48
PSMD11-207ENST00000578397 HCLS1P14317 486 aaPredicted RBP18.05■□□□□ 0.48
PSMD11-207ENST00000578397 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
PSMD11-207ENST00000578397 ISCA1Q9BUE6 129 aa18.05■□□□□ 0.48
PSMD11-207ENST00000578397 ATP6V0A2Q9Y487 856 aa18.05■□□□□ 0.48
PSMD11-207ENST00000578397 TRIM28Q13263 835 aaKnown RBP18.04■□□□□ 0.48
PSMD11-207ENST00000578397 CCDC27Q2M243 656 aa18.04■□□□□ 0.48
PSMD11-207ENST00000578397 ABCC4O15439 1325 aa18.03■□□□□ 0.48
PSMD11-207ENST00000578397 ZNF541Q9H0D2 1346 aa18.03■□□□□ 0.48
PSMD11-207ENST00000578397 ANP32CO43423 234 aa18.03■□□□□ 0.48
PSMD11-207ENST00000578397 CHADLQ6NUI6 762 aa18.03■□□□□ 0.48
PSMD11-207ENST00000578397 DDX46Q7L014 1031 aaKnown RBP18.03■□□□□ 0.48
PSMD11-207ENST00000578397 VPS33BQ9H267 617 aa18.03■□□□□ 0.48
PSMD11-207ENST00000578397 ELL2O00472 640 aaPredicted RBP18.02■□□□□ 0.48
PSMD11-207ENST00000578397 TCERG1O14776 1098 aaKnown RBP18.02■□□□□ 0.48
PSMD11-207ENST00000578397 GOLGA2Q08379 1002 aa18.02■□□□□ 0.48
PSMD11-207ENST00000578397 RIC3Q7Z5B4 369 aa18.02■□□□□ 0.48
PSMD11-207ENST00000578397 GPC2Q8N158 579 aa18.02■□□□□ 0.48
PSMD11-207ENST00000578397 C8orf58Q8NAV2 365 aa18.02■□□□□ 0.48
PSMD11-207ENST00000578397 KLRG1Q96E93 195 aa18.02■□□□□ 0.48
PSMD11-207ENST00000578397 TAF1DQ9H5J8 278 aaPredicted RBP18.02■□□□□ 0.48
PSMD11-207ENST00000578397 ATP5J2-PTCD1G3V325 749 aa18.01■□□□□ 0.47
PSMD11-207ENST00000578397 EIF6P56537 245 aaKnown RBP18.01■□□□□ 0.47
PSMD11-207ENST00000578397 HTRA3P83110 453 aa18.01■□□□□ 0.47
PSMD11-207ENST00000578397 CCDC30Q5VVM6 783 aa18.01■□□□□ 0.47
PSMD11-207ENST00000578397 LDHDQ86WU2 507 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 312 ms