RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 THUMPD2Q9BTF0 503 aaKnown RBP20.98■□□□□ 0.95
VAPA-204ENST00000577901 HACL1Q9UJ83 578 aa20.98■□□□□ 0.95
VAPA-204ENST00000577901 FZD9O00144 591 aa20.97■□□□□ 0.95
VAPA-204ENST00000577901 TMPOP42166 694 aaKnown RBP20.97■□□□□ 0.95
VAPA-204ENST00000577901 DLG5Q8TDM6 1919 aa20.97■□□□□ 0.95
VAPA-204ENST00000577901 GPTP24298 496 aa20.96■□□□□ 0.95
VAPA-204ENST00000577901 EPHX2P34913 555 aa20.96■□□□□ 0.95
VAPA-204ENST00000577901 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
VAPA-204ENST00000577901 PSMD1Q99460 953 aa20.96■□□□□ 0.95
VAPA-204ENST00000577901 ZBTB3Q9H5J0 574 aa20.96■□□□□ 0.95
VAPA-204ENST00000577901 CLEC11AQ9Y240 323 aa20.96■□□□□ 0.95
VAPA-204ENST00000577901 CNTNAP1P78357 1384 aa20.96■□□□□ 0.95
VAPA-204ENST00000577901 SNED1Q8TER0 1413 aa20.95■□□□□ 0.95
VAPA-204ENST00000577901 ITGBL1O95965 494 aaPredicted RBP20.95■□□□□ 0.94
VAPA-204ENST00000577901 RPGRQ92834 1020 aaKnown RBP20.95■□□□□ 0.94
VAPA-204ENST00000577901 UBN2Q6ZU65 1347 aa20.95■□□□□ 0.94
VAPA-204ENST00000577901 HOXA10P31260 410 aaPredicted RBP20.94■□□□□ 0.94
VAPA-204ENST00000577901 SUSD4Q5VX71 490 aa20.94■□□□□ 0.94
VAPA-204ENST00000577901 CC2D2BQ6DHV5 1058 aa20.94■□□□□ 0.94
VAPA-204ENST00000577901 PNMA8AQ86V59 439 aaPredicted RBP20.94■□□□□ 0.94
VAPA-204ENST00000577901 GPC2Q8N158 579 aa20.94■□□□□ 0.94
VAPA-204ENST00000577901 JDP2Q8WYK2 163 aa20.94■□□□□ 0.94
VAPA-204ENST00000577901 RNF123Q5XPI4 1314 aa20.94■□□□□ 0.94
VAPA-204ENST00000577901 NUP98P52948 1817 aa20.94■□□□□ 0.94
VAPA-204ENST00000577901 IBTKQ9P2D0 1353 aaPredicted RBP20.94■□□□□ 0.94
VAPA-204ENST00000577901 TMEM88BA6NKF7 163 aa20.93■□□□□ 0.94
VAPA-204ENST00000577901 NEUROD2Q15784 382 aa20.93■□□□□ 0.94
VAPA-204ENST00000577901 RIC1Q4ADV7 1423 aa20.93■□□□□ 0.94
VAPA-204ENST00000577901 CCDC184Q52MB2 194 aa20.92■□□□□ 0.94
VAPA-204ENST00000577901 ZNF34Q8IZ26 560 aa20.92■□□□□ 0.94
VAPA-204ENST00000577901 RBM17Q96I25 401 aaKnown RBP20.92■□□□□ 0.94
VAPA-204ENST00000577901 MRS2Q9HD23 443 aa20.92■□□□□ 0.94
VAPA-204ENST00000577901 ERBB4Q15303 1308 aa20.92■□□□□ 0.94
VAPA-204ENST00000577901 NTSR2O95665 410 aa20.91■□□□□ 0.94
VAPA-204ENST00000577901 GRIPAP1Q4V328 841 aa20.91■□□□□ 0.94
VAPA-204ENST00000577901 GIGYF2Q6Y7W6 1299 aaKnown RBP20.91■□□□□ 0.94
VAPA-204ENST00000577901 ADAMTSL1Q8N6G6 1762 aa20.91■□□□□ 0.94
VAPA-204ENST00000577901 EIF6P56537 245 aaKnown RBP20.9■□□□□ 0.94
VAPA-204ENST00000577901 MAP1SQ66K74 1059 aaPredicted RBP20.9■□□□□ 0.94
VAPA-204ENST00000577901 CNTROBQ8N137 903 aa20.9■□□□□ 0.94
VAPA-204ENST00000577901 CRAMP1Q96RY5 1269 aa20.9■□□□□ 0.94
VAPA-204ENST00000577901 TSPYL4Q9UJ04 414 aa20.9■□□□□ 0.94
VAPA-204ENST00000577901 GJA3Q9Y6H8 435 aa20.9■□□□□ 0.94
VAPA-204ENST00000577901 COL4A5P29400 1685 aa20.89■□□□□ 0.94
VAPA-204ENST00000577901 PPEF1O14829 653 aaPredicted RBP20.89■□□□□ 0.93
VAPA-204ENST00000577901 VEGFBP49765 207 aa20.89■□□□□ 0.93
VAPA-204ENST00000577901 PPP1R42Q7Z4L9 355 aa20.89■□□□□ 0.93
VAPA-204ENST00000577901 TCERG1O14776 1098 aaKnown RBP20.88■□□□□ 0.93
VAPA-204ENST00000577901 FOXN1O15353 648 aa20.88■□□□□ 0.93
VAPA-204ENST00000577901 PARP10Q53GL7 1025 aa20.88■□□□□ 0.93
VAPA-204ENST00000577901 C3orf67Q6ZVT6 689 aa20.88■□□□□ 0.93
VAPA-204ENST00000577901 SLC51AQ86UW1 340 aa20.88■□□□□ 0.93
VAPA-204ENST00000577901 LARGE2Q8N3Y3 721 aa20.88■□□□□ 0.93
VAPA-204ENST00000577901 BABAM1Q9NWV8 329 aa20.87■□□□□ 0.93
VAPA-204ENST00000577901 APAF1O14727 1248 aa20.86■□□□□ 0.93
VAPA-204ENST00000577901 EIF2S2P20042 333 aaKnown RBP20.86■□□□□ 0.93
VAPA-204ENST00000577901 LMOD1P29536 600 aaPredicted RBP20.86■□□□□ 0.93
VAPA-204ENST00000577901 PDIA6Q15084 440 aa20.86■□□□□ 0.93
VAPA-204ENST00000577901 LRP10Q7Z4F1 713 aa20.86■□□□□ 0.93
VAPA-204ENST00000577901 NLRP3Q96P20 1036 aa20.86■□□□□ 0.93
VAPA-204ENST00000577901 AIDAQ96BJ3 306 aa20.85■□□□□ 0.93
VAPA-204ENST00000577901 UTP14AQ9BVJ6 771 aaKnown RBP20.85■□□□□ 0.93
VAPA-204ENST00000577901 TRIM35Q9UPQ4 493 aa20.85■□□□□ 0.93
VAPA-204ENST00000577901 RASSF10A6NK89 507 aa20.84■□□□□ 0.93
VAPA-204ENST00000577901 SCNN1DP51172 638 aa20.84■□□□□ 0.93
VAPA-204ENST00000577901 PROSER3Q2NL68 480 aa20.84■□□□□ 0.93
VAPA-204ENST00000577901 DEFB115Q30KQ5 88 aa20.84■□□□□ 0.93
VAPA-204ENST00000577901 SLC10A5Q5PT55 438 aa20.84■□□□□ 0.93
VAPA-204ENST00000577901 NIM1KQ8IY84 436 aa20.84■□□□□ 0.93
VAPA-204ENST00000577901 TMX4Q9H1E5 349 aaPredicted RBP20.84■□□□□ 0.93
VAPA-204ENST00000577901 LTBP1Q14766 1721 aa20.84■□□□□ 0.93
VAPA-204ENST00000577901 ANXA1P04083 346 aa20.83■□□□□ 0.93
VAPA-204ENST00000577901 CTCFP49711 727 aaPredicted RBP20.83■□□□□ 0.93
VAPA-204ENST00000577901 CACNB1Q02641 598 aaPredicted RBP20.83■□□□□ 0.93
VAPA-204ENST00000577901 PRDM10Q9NQV6 1147 aa20.83■□□□□ 0.93
VAPA-204ENST00000577901 ATP6V0A2Q9Y487 856 aa20.83■□□□□ 0.93
VAPA-204ENST00000577901 PPIP5K2O43314 1243 aa20.82■□□□□ 0.92
VAPA-204ENST00000577901 EPS15P42566 896 aa20.82■□□□□ 0.92
VAPA-204ENST00000577901 ABT1Q9ULW3 272 aaKnown RBP20.82■□□□□ 0.92
VAPA-204ENST00000577901 AOC3Q16853 763 aa20.81■□□□□ 0.92
VAPA-204ENST00000577901 VPS33BQ9H267 617 aa20.81■□□□□ 0.92
VAPA-204ENST00000577901 DDX21Q9NR30 783 aaKnown RBP eCLIP20.81■□□□□ 0.92
VAPA-204ENST00000577901 WBP1LQ9NX94 342 aa20.81■□□□□ 0.92
VAPA-204ENST00000577901 ABCC4O15439 1325 aa20.8■□□□□ 0.92
VAPA-204ENST00000577901 CALD1Q05682 793 aaKnown RBP20.8■□□□□ 0.92
VAPA-204ENST00000577901 HSP90AB3PQ58FF7 597 aa20.8■□□□□ 0.92
VAPA-204ENST00000577901 USP50Q70EL3 339 aaPredicted RBP20.8■□□□□ 0.92
VAPA-204ENST00000577901 COPS6Q7L5N1 327 aa20.8■□□□□ 0.92
VAPA-204ENST00000577901 NECTIN2Q92692 538 aa20.8■□□□□ 0.92
VAPA-204ENST00000577901 LAS1LQ9Y4W2 734 aaKnown RBP20.8■□□□□ 0.92
VAPA-204ENST00000577901 AIMP1Q12904 312 aaKnown RBP20.79■□□□□ 0.92
VAPA-204ENST00000577901 NLRP10Q86W26 655 aa20.79■□□□□ 0.92
VAPA-204ENST00000577901 SUPT20HQ8NEM7 779 aa20.79■□□□□ 0.92
VAPA-204ENST00000577901 WDR33Q9C0J8 1336 aaKnown RBP20.78■□□□□ 0.92
VAPA-204ENST00000577901 CHL1O00533 1208 aa20.78■□□□□ 0.92
VAPA-204ENST00000577901 BBOX1O75936 387 aa20.78■□□□□ 0.92
VAPA-204ENST00000577901 XAGE3Q8WTP9 111 aa20.78■□□□□ 0.92
VAPA-204ENST00000577901 RTFDC1Q9BY42 306 aaPredicted RBP20.78■□□□□ 0.92
VAPA-204ENST00000577901 ZNRF3Q9ULT6 936 aa20.78■□□□□ 0.92
VAPA-204ENST00000577901 HCLS1P14317 486 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms