RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 ZNF316A6NFI3 1004 aaPredicted RBP17.69■□□□□ 0.42
CUEDC1-204ENST00000577497 HOXB7P09629 217 aa17.69■□□□□ 0.42
CUEDC1-204ENST00000577497 C16orf71Q8IYS4 520 aaPredicted RBP17.69■□□□□ 0.42
CUEDC1-204ENST00000577497 RBM46Q8TBY0 533 aaKnown RBP17.69■□□□□ 0.42
CUEDC1-204ENST00000577497 POTECB2RU33 542 aa17.68■□□□□ 0.42
CUEDC1-204ENST00000577497 ALDH1B1P30837 517 aa17.68■□□□□ 0.42
CUEDC1-204ENST00000577497 PARP10Q53GL7 1025 aa17.68■□□□□ 0.42
CUEDC1-204ENST00000577497 PPP1R42Q7Z4L9 355 aa17.68■□□□□ 0.42
CUEDC1-204ENST00000577497 SYNE4Q8N205 404 aa17.68■□□□□ 0.42
CUEDC1-204ENST00000577497 WDR90Q96KV7 1748 aa17.68■□□□□ 0.42
CUEDC1-204ENST00000577497 UTP14AQ9BVJ6 771 aaKnown RBP17.68■□□□□ 0.42
CUEDC1-204ENST00000577497 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
CUEDC1-204ENST00000577497 IFT57Q9NWB7 429 aa17.68■□□□□ 0.42
CUEDC1-204ENST00000577497 HOXA10P31260 410 aaPredicted RBP17.67■□□□□ 0.42
CUEDC1-204ENST00000577497 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
CUEDC1-204ENST00000577497 NLRP10Q86W26 655 aa17.67■□□□□ 0.42
CUEDC1-204ENST00000577497 RPGRQ92834 1020 aaKnown RBP17.67■□□□□ 0.42
CUEDC1-204ENST00000577497 LAMB2P55268 1798 aa17.66■□□□□ 0.42
CUEDC1-204ENST00000577497 ELL2O00472 640 aaPredicted RBP17.66■□□□□ 0.42
CUEDC1-204ENST00000577497 TCIRG1Q13488 830 aa17.66■□□□□ 0.42
CUEDC1-204ENST00000577497 DBF4Q9UBU7 674 aaPredicted RBP17.66■□□□□ 0.42
CUEDC1-204ENST00000577497 COL4A5P29400 1685 aa17.65■□□□□ 0.42
CUEDC1-204ENST00000577497 DDNO94850 711 aaPredicted RBP17.65■□□□□ 0.42
CUEDC1-204ENST00000577497 VEGFAP15692 232 aaPredicted RBP17.65■□□□□ 0.42
CUEDC1-204ENST00000577497 GNAI1P63096 354 aa17.65■□□□□ 0.42
CUEDC1-204ENST00000577497 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
CUEDC1-204ENST00000577497 TCERG1O14776 1098 aaKnown RBP17.64■□□□□ 0.41
CUEDC1-204ENST00000577497 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.41
CUEDC1-204ENST00000577497 HTRA3P83110 453 aa17.64■□□□□ 0.41
CUEDC1-204ENST00000577497 HSP90AB3PQ58FF7 597 aa17.64■□□□□ 0.41
CUEDC1-204ENST00000577497 SLC10A5Q5PT55 438 aa17.64■□□□□ 0.41
CUEDC1-204ENST00000577497 DPY19L2Q6NUT2 758 aa17.64■□□□□ 0.41
CUEDC1-204ENST00000577497 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
CUEDC1-204ENST00000577497 PLBD2Q8NHP8 589 aa17.64■□□□□ 0.41
CUEDC1-204ENST00000577497 ZNF541Q9H0D2 1346 aa17.64■□□□□ 0.41
CUEDC1-204ENST00000577497 PPEF1O14829 653 aaPredicted RBP17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 APLP1P51693 650 aa17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 CALD1Q05682 793 aaKnown RBP17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 FSTL1Q12841 308 aa17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 RBM17Q96I25 401 aaKnown RBP17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 NLRP3Q96P20 1036 aa17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 CRAMP1Q96RY5 1269 aa17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 ABCC4O15439 1325 aa17.63■□□□□ 0.41
CUEDC1-204ENST00000577497 DDX60Q8IY21 1712 aaKnown RBP17.62■□□□□ 0.41
CUEDC1-204ENST00000577497 ATP5J2-PTCD1G3V325 749 aa17.62■□□□□ 0.41
CUEDC1-204ENST00000577497 IARSP41252 1262 aaKnown RBP17.62■□□□□ 0.41
CUEDC1-204ENST00000577497 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
CUEDC1-204ENST00000577497 TSR2Q969E8 191 aaKnown RBP17.62■□□□□ 0.41
CUEDC1-204ENST00000577497 PHAXQ9H814 394 aaKnown RBP17.62■□□□□ 0.41
CUEDC1-204ENST00000577497 HYPKQ9NX55 129 aa17.62■□□□□ 0.41
CUEDC1-204ENST00000577497 TRMT112Q9UI30 125 aaKnown RBP17.62■□□□□ 0.41
CUEDC1-204ENST00000577497 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
CUEDC1-204ENST00000577497 ANP32CO43423 234 aa17.61■□□□□ 0.41
CUEDC1-204ENST00000577497 SMC1BQ8NDV3 1235 aa17.61■□□□□ 0.41
CUEDC1-204ENST00000577497 PSMD1Q99460 953 aa17.61■□□□□ 0.41
CUEDC1-204ENST00000577497 ISCA1Q9BUE6 129 aa17.61■□□□□ 0.41
CUEDC1-204ENST00000577497 SH3TC1Q8TE82 1336 aa17.61■□□□□ 0.41
CUEDC1-204ENST00000577497 POTEIP0CG38 1075 aa17.6■□□□□ 0.41
CUEDC1-204ENST00000577497 POTEJP0CG39 1038 aa17.6■□□□□ 0.41
CUEDC1-204ENST00000577497 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
CUEDC1-204ENST00000577497 COL4A1P02462 1669 aa17.6■□□□□ 0.41
CUEDC1-204ENST00000577497 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
CUEDC1-204ENST00000577497 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
CUEDC1-204ENST00000577497 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
CUEDC1-204ENST00000577497 TAF1P21675 1872 aa17.58■□□□□ 0.41
CUEDC1-204ENST00000577497 FZD9O00144 591 aa17.58■□□□□ 0.4
CUEDC1-204ENST00000577497 RTL5Q5HYW3 569 aaPredicted RBP17.58■□□□□ 0.4
CUEDC1-204ENST00000577497 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.4
CUEDC1-204ENST00000577497 L3MBTL3Q96JM7 780 aaPredicted RBP17.58■□□□□ 0.4
CUEDC1-204ENST00000577497 ATP6V0A2Q9Y487 856 aa17.57■□□□□ 0.4
CUEDC1-204ENST00000577497 RIC3Q7Z5B4 369 aa17.56■□□□□ 0.4
CUEDC1-204ENST00000577497 GOLGA2Q08379 1002 aa17.55■□□□□ 0.4
CUEDC1-204ENST00000577497 MYD88Q99836 296 aa17.55■□□□□ 0.4
CUEDC1-204ENST00000577497 SALL2Q9Y467 1007 aaPredicted RBP17.55■□□□□ 0.4
CUEDC1-204ENST00000577497 SCN4AP35499 1836 aa17.55■□□□□ 0.4
CUEDC1-204ENST00000577497 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
CUEDC1-204ENST00000577497 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
CUEDC1-204ENST00000577497 GRAPQ13588 217 aa17.54■□□□□ 0.4
CUEDC1-204ENST00000577497 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
CUEDC1-204ENST00000577497 DDX46Q7L014 1031 aaKnown RBP17.54■□□□□ 0.4
CUEDC1-204ENST00000577497 LARGE2Q8N3Y3 721 aa17.54■□□□□ 0.4
CUEDC1-204ENST00000577497 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
CUEDC1-204ENST00000577497 TAF1DQ9H5J8 278 aaPredicted RBP17.54■□□□□ 0.4
CUEDC1-204ENST00000577497 LRRC37AA6NMS7 1700 aa17.54■□□□□ 0.4
CUEDC1-204ENST00000577497 LTBP1Q14766 1721 aa17.53■□□□□ 0.4
CUEDC1-204ENST00000577497 AOC3Q16853 763 aa17.53■□□□□ 0.4
CUEDC1-204ENST00000577497 GRIPAP1Q4V328 841 aa17.53■□□□□ 0.4
CUEDC1-204ENST00000577497 JDP2Q8WYK2 163 aa17.53■□□□□ 0.4
CUEDC1-204ENST00000577497 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 IQCA1LA6NCM1 817 aa17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 IRS4O14654 1257 aaPredicted RBP17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 PPIP5K2O43314 1243 aa17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 BBOX1O75936 387 aa17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 SF3B3Q15393 1217 aaKnown RBP17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 TWISTNBQ3B726 338 aaPredicted RBP17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 CHADLQ6NUI6 762 aa17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 SP8Q8IXZ3 490 aa17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 GPC2Q8N158 579 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms