RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 IRX6P78412 446 aaPredicted RBP7.66□□□□□ -1.18
CTNS-210ENST00000576979 ZNF326Q5BKZ1 582 aaKnown RBP7.66□□□□□ -1.18
CTNS-210ENST00000576979 CYP2U1Q7Z449 544 aa7.66□□□□□ -1.18
CTNS-210ENST00000576979 UHRF1BP1Q6BDS2 1440 aa7.66□□□□□ -1.18
CTNS-210ENST00000576979 A0A1B0GTH6 734 aa7.65□□□□□ -1.18
CTNS-210ENST00000576979 CHD1O14646 1710 aa7.65□□□□□ -1.18
CTNS-210ENST00000576979 IL2RAP01589 272 aa7.65□□□□□ -1.18
CTNS-210ENST00000576979 MSX1P28360 303 aa7.65□□□□□ -1.18
CTNS-210ENST00000576979 CENPCQ03188 943 aa7.65□□□□□ -1.18
CTNS-210ENST00000576979 ARID3AQ99856 593 aa7.65□□□□□ -1.18
CTNS-210ENST00000576979 POLR3GLQ9BT43 218 aa7.65□□□□□ -1.18
CTNS-210ENST00000576979 TRPM1Q7Z4N2 1603 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 UNC13BO14795 1591 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 MAST1Q9Y2H9 1570 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 ATP10BO94823 1461 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 SMG6Q86US8 1419 aaKnown RBP7.64□□□□□ -1.19
CTNS-210ENST00000576979 NUP155O75694 1391 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 FANCIQ9NVI1 1328 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 DYRK3O43781 588 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 TRAK2O60296 914 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 TSPY4P0CV99 314 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 TSPY10P0CW01 314 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 CCDC184Q52MB2 194 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 CNKSR1Q969H4 720 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 PLVAPQ9BX97 442 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 KLF15Q9UIH9 416 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 HCN2Q9UL51 889 aa7.64□□□□□ -1.19
CTNS-210ENST00000576979 LAMC1P11047 1609 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 EIF2AK4Q9P2K8 1649 aaKnown RBP7.63□□□□□ -1.19
CTNS-210ENST00000576979 SAMD9LQ8IVG5 1584 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 CCDC141Q6ZP82 1450 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 KIF15Q9NS87 1388 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 USP17L8P0C7I0 530 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 CSB-PGBD3P0DP91 1061 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 ARAFP10398 606 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 C4orf17Q53FE4 359 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 PGBD3Q8N328 593 aa7.63□□□□□ -1.19
CTNS-210ENST00000576979 DHX29Q7Z478 1369 aaKnown RBP7.62□□□□□ -1.19
CTNS-210ENST00000576979 KTN1Q86UP2 1357 aaKnown RBP7.62□□□□□ -1.19
CTNS-210ENST00000576979 PNMA1Q8ND90 353 aa7.62□□□□□ -1.19
CTNS-210ENST00000576979 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.62□□□□□ -1.19
CTNS-210ENST00000576979 CARD11Q9BXL7 1154 aa7.62□□□□□ -1.19
CTNS-210ENST00000576979 GPBP1L1Q9HC44 474 aaPredicted RBP7.62□□□□□ -1.19
CTNS-210ENST00000576979 PCDHB11Q9Y5F2 797 aa7.62□□□□□ -1.19
CTNS-210ENST00000576979 FAM135AQ9P2D6 1515 aa7.62□□□□□ -1.19
CTNS-210ENST00000576979 PTPRGP23470 1445 aa7.61□□□□□ -1.19
CTNS-210ENST00000576979 IQGAP3Q86VI3 1631 aa7.61□□□□□ -1.19
CTNS-210ENST00000576979 LBRQ14739 615 aaKnown RBP7.61□□□□□ -1.19
CTNS-210ENST00000576979 PRSS36Q5K4E3 855 aa7.61□□□□□ -1.19
CTNS-210ENST00000576979 FCHSD1Q86WN1 690 aa7.61□□□□□ -1.19
CTNS-210ENST00000576979 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
CTNS-210ENST00000576979 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
CTNS-210ENST00000576979 TRIM34Q9BYJ4 488 aa7.61□□□□□ -1.19
CTNS-210ENST00000576979 NUDCQ9Y266 331 aa7.61□□□□□ -1.19
CTNS-210ENST00000576979 HRH3Q9Y5N1 445 aa7.61□□□□□ -1.19
CTNS-210ENST00000576979 PLXNC1O60486 1568 aa7.61□□□□□ -1.19
CTNS-210ENST00000576979 FBXO45P0C2W1 286 aa7.6□□□□□ -1.19
CTNS-210ENST00000576979 SPATA31C1P0DKV0 1188 aa7.6□□□□□ -1.19
CTNS-210ENST00000576979 EFHC2Q5JST6 749 aa7.6□□□□□ -1.19
CTNS-210ENST00000576979 IL27Q8NEV9 243 aa7.6□□□□□ -1.19
CTNS-210ENST00000576979 FHDC1Q9C0D6 1143 aaPredicted RBP7.6□□□□□ -1.19
CTNS-210ENST00000576979 GOLGA2P5Q9HBQ8 144 aa7.6□□□□□ -1.19
CTNS-210ENST00000576979 PLEKHH2Q8IVE3 1493 aa7.6□□□□□ -1.19
CTNS-210ENST00000576979 BRD4O60885 1362 aaPredicted RBP7.59□□□□□ -1.19
CTNS-210ENST00000576979 ARHGAP5Q13017 1502 aa7.59□□□□□ -1.19
CTNS-210ENST00000576979 RALBP1Q15311 655 aa7.59□□□□□ -1.19
CTNS-210ENST00000576979 TMC1Q8TDI8 760 aa7.59□□□□□ -1.19
CTNS-210ENST00000576979 DNAAF2Q9NVR5 837 aaKnown RBP7.59□□□□□ -1.19
CTNS-210ENST00000576979 SHROOM2Q13796 1616 aa7.59□□□□□ -1.19
CTNS-210ENST00000576979 SYCP2Q9BX26 1530 aa7.58□□□□□ -1.2
CTNS-210ENST00000576979 MYBBP1AQ9BQG0 1328 aaKnown RBP7.58□□□□□ -1.2
CTNS-210ENST00000576979 ZBBXA8MT70 800 aa7.58□□□□□ -1.2
CTNS-210ENST00000576979 CNGB1Q14028 1251 aaPredicted RBP7.58□□□□□ -1.2
CTNS-210ENST00000576979 SKIV2LQ15477 1246 aaKnown RBP7.58□□□□□ -1.2
CTNS-210ENST00000576979 B4GALNT3Q6L9W6 998 aa7.58□□□□□ -1.2
CTNS-210ENST00000576979 TMEM214Q6NUQ4 689 aaKnown RBP7.58□□□□□ -1.2
CTNS-210ENST00000576979 KDM4CQ9H3R0 1056 aa7.58□□□□□ -1.2
CTNS-210ENST00000576979 CCDC144AA2RUR9 1427 aa7.58□□□□□ -1.2
CTNS-210ENST00000576979 TTC37Q6PGP7 1564 aa7.58□□□□□ -1.2
CTNS-210ENST00000576979 ZBTB7CA1YPR0 619 aa7.57□□□□□ -1.2
CTNS-210ENST00000576979 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
CTNS-210ENST00000576979 HNRNPMP52272 730 aaKnown RBP eCLIP7.57□□□□□ -1.2
CTNS-210ENST00000576979 GNASQ5JWF2 1037 aa7.57□□□□□ -1.2
CTNS-210ENST00000576979 DCAF11Q8TEB1 546 aa7.57□□□□□ -1.2
CTNS-210ENST00000576979 ZCCHC2Q9C0B9 1178 aaKnown RBP7.57□□□□□ -1.2
CTNS-210ENST00000576979 C1orf115Q9H7X2 142 aa7.57□□□□□ -1.2
CTNS-210ENST00000576979 RNF17Q9BXT8 1623 aaKnown RBP7.56□□□□□ -1.2
CTNS-210ENST00000576979 CEP152O94986 1710 aa7.56□□□□□ -1.2
CTNS-210ENST00000576979 PRAG1Q86YV5 1406 aa7.56□□□□□ -1.2
CTNS-210ENST00000576979 STAU1O95793 577 aaKnown RBP7.56□□□□□ -1.2
CTNS-210ENST00000576979 GNRH1P01148 92 aa7.56□□□□□ -1.2
CTNS-210ENST00000576979 CD33P20138 364 aa7.56□□□□□ -1.2
CTNS-210ENST00000576979 ADH6P28332 368 aa7.56□□□□□ -1.2
CTNS-210ENST00000576979 CCDC136Q96JN2 1154 aa7.56□□□□□ -1.2
CTNS-210ENST00000576979 CRISPLD1Q9H336 500 aa7.56□□□□□ -1.2
CTNS-210ENST00000576979 CCDC9Q9Y3X0 531 aaKnown RBP7.56□□□□□ -1.2
CTNS-210ENST00000576979 PRDM15P57071 1507 aaPredicted RBP7.56□□□□□ -1.2
CTNS-210ENST00000576979 DUOX2Q9NRD8 1548 aa7.56□□□□□ -1.2
CTNS-210ENST00000576979 ST20-MTHFSA0A0A6YYL1 179 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms