RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, human

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40B-210	ENST00000576148	RBM27	Q9P2N5	1060 aa	Known RBP	10.09	□□□□□ -0.79
RAB40B-210	ENST00000576148	AKAP11	Q9UKA4	1901 aa		10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	KLRG2	A4D1S0	409 aa	Predicted RBP	10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	FKTN	O75072	461 aa		10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	GRIPAP1	Q4V328	841 aa		10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	DLK2	Q6UY11	383 aa		10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	KRT26	Q7Z3Y9	468 aa		10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	VSIG10	Q8N0Z9	540 aa		10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	BCL2L13	Q9BXK5	485 aa		10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	ARFGEF2	Q9Y6D5	1785 aa		10.08	□□□□□ -0.8
RAB40B-210	ENST00000576148	CACNA1S	Q13698	1873 aa		10.07	□□□□□ -0.8
RAB40B-210	ENST00000576148	BCOR	Q6W2J9	1755 aa		10.07	□□□□□ -0.8
RAB40B-210	ENST00000576148	SCN11A	Q9UI33	1791 aa		10.07	□□□□□ -0.8
RAB40B-210	ENST00000576148	TRPM4	Q8TD43	1214 aa		10.07	□□□□□ -0.8
RAB40B-210	ENST00000576148	TMEM106C	Q9BVX2	250 aa		10.07	□□□□□ -0.8
RAB40B-210	ENST00000576148	CEP290	O15078	2479 aa		10.07	□□□□□ -0.8
RAB40B-210	ENST00000576148	CDHR2	Q9BYE9	1310 aa		10.07	□□□□□ -0.8
RAB40B-210	ENST00000576148	NPC1L1	Q9UHC9	1359 aa		10.06	□□□□□ -0.8
RAB40B-210	ENST00000576148		H7C1D1	291 aa		10.06	□□□□□ -0.8
RAB40B-210	ENST00000576148	CXCL9	Q07325	125 aa		10.06	□□□□□ -0.8
RAB40B-210	ENST00000576148	SLC39A6	Q13433	755 aa		10.06	□□□□□ -0.8
RAB40B-210	ENST00000576148	RASAL3	Q86YV0	1011 aa		10.06	□□□□□ -0.8
RAB40B-210	ENST00000576148	CARD11	Q9BXL7	1154 aa		10.06	□□□□□ -0.8
RAB40B-210	ENST00000576148	COL4A5	P29400	1685 aa		10.06	□□□□□ -0.8
RAB40B-210	ENST00000576148	PPIP5K2	O43314	1243 aa		10.05	□□□□□ -0.8
RAB40B-210	ENST00000576148	EIF4A2	Q14240	407 aa	Known RBP	10.05	□□□□□ -0.8
RAB40B-210	ENST00000576148	TPTE2	Q6XPS3	522 aa		10.05	□□□□□ -0.8
RAB40B-210	ENST00000576148	SLC52A2	Q9HAB3	445 aa		10.05	□□□□□ -0.8
RAB40B-210	ENST00000576148	PRDM6	Q9NQX0	595 aa		10.05	□□□□□ -0.8
RAB40B-210	ENST00000576148	CNOT7	Q9UIV1	285 aa	Known RBP	10.05	□□□□□ -0.8
RAB40B-210	ENST00000576148	ZNRF3	Q9ULT6	936 aa		10.05	□□□□□ -0.8
RAB40B-210	ENST00000576148	TRIM17	Q9Y577	477 aa		10.05	□□□□□ -0.8
RAB40B-210	ENST00000576148	CAMTA2	O94983	1202 aa		10.04	□□□□□ -0.8
RAB40B-210	ENST00000576148	ANKRD13D	Q6ZTN6	518 aa		10.04	□□□□□ -0.8
RAB40B-210	ENST00000576148	DCPS	Q96C86	337 aa	Known RBP	10.04	□□□□□ -0.8
RAB40B-210	ENST00000576148	IL6ST	P40189	918 aa	Predicted RBP	10.03	□□□□□ -0.8
RAB40B-210	ENST00000576148	TNIP1	Q15025	636 aa		10.03	□□□□□ -0.8
RAB40B-210	ENST00000576148	AOC3	Q16853	763 aa		10.03	□□□□□ -0.8
RAB40B-210	ENST00000576148	SNED1	Q8TER0	1413 aa		10.03	□□□□□ -0.8
RAB40B-210	ENST00000576148	ARMC5	Q96C12	935 aa		10.03	□□□□□ -0.8
RAB40B-210	ENST00000576148	VPS33B	Q9H267	617 aa		10.03	□□□□□ -0.8
RAB40B-210	ENST00000576148	KIAA0100	Q14667	2235 aa	Known RBP	10.02	□□□□□ -0.81
RAB40B-210	ENST00000576148	ADM5	C9JUS6	153 aa		10.02	□□□□□ -0.81
RAB40B-210	ENST00000576148	SLC24A1	O60721	1099 aa		10.02	□□□□□ -0.81
RAB40B-210	ENST00000576148	TM4SF4	P48230	202 aa		10.02	□□□□□ -0.81
RAB40B-210	ENST00000576148	OTOP1	Q7RTM1	612 aa		10.02	□□□□□ -0.81
RAB40B-210	ENST00000576148	MPND	Q8N594	471 aa		10.02	□□□□□ -0.81
RAB40B-210	ENST00000576148	TMX4	Q9H1E5	349 aa	Predicted RBP	10.02	□□□□□ -0.81
RAB40B-210	ENST00000576148	RANBP2	P49792	3224 aa	Known RBP	10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	GTF2E1	P29083	439 aa	Predicted RBP	10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	CLEC4G	Q6UXB4	293 aa		10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	DZIP3	Q86Y13	1208 aa	Known RBP	10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	SULF1	Q8IWU6	871 aa		10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	MICALL2	Q8IY33	904 aa		10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	DPF3	Q92784	378 aa		10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	POLK	Q9UBT6	870 aa		10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	ZNF652	Q9Y2D9	606 aa		10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	STXBP5L	Q9Y2K9	1186 aa		10.01	□□□□□ -0.81
RAB40B-210	ENST00000576148	SHTN1	A0MZ66	631 aa		10	□□□□□ -0.81
RAB40B-210	ENST00000576148	RAD17	O75943	681 aa		10	□□□□□ -0.81
RAB40B-210	ENST00000576148	FKBP1B	P68106	108 aa		10	□□□□□ -0.81
RAB40B-210	ENST00000576148	SLC4A8	Q2Y0W8	1093 aa		10	□□□□□ -0.81
RAB40B-210	ENST00000576148	SAMD7	Q7Z3H4	446 aa		10	□□□□□ -0.81
RAB40B-210	ENST00000576148	TTC5	Q8N0Z6	440 aa		10	□□□□□ -0.81
RAB40B-210	ENST00000576148	CFHR5	Q9BXR6	569 aa		10	□□□□□ -0.81
RAB40B-210	ENST00000576148	PRO3102	Q9H379	93 aa		10	□□□□□ -0.81
RAB40B-210	ENST00000576148	PTPN22	Q9Y2R2	807 aa		10	□□□□□ -0.81
RAB40B-210	ENST00000576148	ANKRD26	Q9UPS8	1709 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	PAPPA2	Q9BXP8	1791 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148		A0A1W2PPC1	479 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	FAM177B	A6PVY3	158 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	SOX1	O00570	391 aa	Predicted RBP	9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	TCERG1	O14776	1098 aa	Known RBP	9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	COL9A1	P20849	921 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	TNNT2	P45379	298 aa	Predicted RBP	9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	SREBF2	Q12772	1141 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	SUPT20H	Q8NEM7	779 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	RPGR	Q92834	1020 aa	Known RBP	9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	LRCH3	Q96II8	777 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	R3HDML	Q9H3Y0	253 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	LGR6	Q9HBX8	967 aa		9.99	□□□□□ -0.81
RAB40B-210	ENST00000576148	A1BG	P04217	495 aa		9.98	□□□□□ -0.81
RAB40B-210	ENST00000576148	CRY2	Q49AN0	593 aa		9.98	□□□□□ -0.81
RAB40B-210	ENST00000576148	RBM26	Q5T8P6	1007 aa	Known RBP	9.98	□□□□□ -0.81
RAB40B-210	ENST00000576148	DEFB123	Q8N688	67 aa		9.98	□□□□□ -0.81
RAB40B-210	ENST00000576148	CDCA5	Q96FF9	252 aa		9.98	□□□□□ -0.81
RAB40B-210	ENST00000576148	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9.98	□□□□□ -0.81
RAB40B-210	ENST00000576148	SCN7A	Q01118	1682 aa		9.98	□□□□□ -0.81
RAB40B-210	ENST00000576148	PPEF1	O14829	653 aa	Predicted RBP	9.97	□□□□□ -0.81
RAB40B-210	ENST00000576148	RNMT	O43148	476 aa	Known RBP	9.97	□□□□□ -0.81
RAB40B-210	ENST00000576148	ALDH1A1	P00352	501 aa		9.97	□□□□□ -0.81
RAB40B-210	ENST00000576148	NBPF11	Q86T75	865 aa		9.97	□□□□□ -0.81
RAB40B-210	ENST00000576148	DPF2	Q92785	391 aa		9.97	□□□□□ -0.81
RAB40B-210	ENST00000576148	BRCA2	P51587	3418 aa		9.97	□□□□□ -0.81
RAB40B-210	ENST00000576148	HTT	P42858	3142 aa		9.96	□□□□□ -0.81
RAB40B-210	ENST00000576148	RBBP6	Q7Z6E9	1792 aa	Known RBP	9.96	□□□□□ -0.81

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