RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
RAB40B-210ENST00000576148 AKAP11Q9UKA4 1901 aa10.08□□□□□ -0.8
RAB40B-210ENST00000576148 KLRG2A4D1S0 409 aaPredicted RBP10.08□□□□□ -0.8
RAB40B-210ENST00000576148 FKTNO75072 461 aa10.08□□□□□ -0.8
RAB40B-210ENST00000576148 GRIPAP1Q4V328 841 aa10.08□□□□□ -0.8
RAB40B-210ENST00000576148 DLK2Q6UY11 383 aa10.08□□□□□ -0.8
RAB40B-210ENST00000576148 KRT26Q7Z3Y9 468 aa10.08□□□□□ -0.8
RAB40B-210ENST00000576148 VSIG10Q8N0Z9 540 aa10.08□□□□□ -0.8
RAB40B-210ENST00000576148 BCL2L13Q9BXK5 485 aa10.08□□□□□ -0.8
RAB40B-210ENST00000576148 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
RAB40B-210ENST00000576148 ARFGEF2Q9Y6D5 1785 aa10.08□□□□□ -0.8
RAB40B-210ENST00000576148 CACNA1SQ13698 1873 aa10.07□□□□□ -0.8
RAB40B-210ENST00000576148 BCORQ6W2J9 1755 aa10.07□□□□□ -0.8
RAB40B-210ENST00000576148 SCN11AQ9UI33 1791 aa10.07□□□□□ -0.8
RAB40B-210ENST00000576148 TRPM4Q8TD43 1214 aa10.07□□□□□ -0.8
RAB40B-210ENST00000576148 TMEM106CQ9BVX2 250 aa10.07□□□□□ -0.8
RAB40B-210ENST00000576148 CEP290O15078 2479 aa10.07□□□□□ -0.8
RAB40B-210ENST00000576148 CDHR2Q9BYE9 1310 aa10.07□□□□□ -0.8
RAB40B-210ENST00000576148 NPC1L1Q9UHC9 1359 aa10.06□□□□□ -0.8
RAB40B-210ENST00000576148 H7C1D1 291 aa10.06□□□□□ -0.8
RAB40B-210ENST00000576148 CXCL9Q07325 125 aa10.06□□□□□ -0.8
RAB40B-210ENST00000576148 SLC39A6Q13433 755 aa10.06□□□□□ -0.8
RAB40B-210ENST00000576148 RASAL3Q86YV0 1011 aa10.06□□□□□ -0.8
RAB40B-210ENST00000576148 CARD11Q9BXL7 1154 aa10.06□□□□□ -0.8
RAB40B-210ENST00000576148 COL4A5P29400 1685 aa10.06□□□□□ -0.8
RAB40B-210ENST00000576148 PPIP5K2O43314 1243 aa10.05□□□□□ -0.8
RAB40B-210ENST00000576148 EIF4A2Q14240 407 aaKnown RBP10.05□□□□□ -0.8
RAB40B-210ENST00000576148 TPTE2Q6XPS3 522 aa10.05□□□□□ -0.8
RAB40B-210ENST00000576148 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
RAB40B-210ENST00000576148 PRDM6Q9NQX0 595 aa10.05□□□□□ -0.8
RAB40B-210ENST00000576148 CNOT7Q9UIV1 285 aaKnown RBP10.05□□□□□ -0.8
RAB40B-210ENST00000576148 ZNRF3Q9ULT6 936 aa10.05□□□□□ -0.8
RAB40B-210ENST00000576148 TRIM17Q9Y577 477 aa10.05□□□□□ -0.8
RAB40B-210ENST00000576148 CAMTA2O94983 1202 aa10.04□□□□□ -0.8
RAB40B-210ENST00000576148 ANKRD13DQ6ZTN6 518 aa10.04□□□□□ -0.8
RAB40B-210ENST00000576148 DCPSQ96C86 337 aaKnown RBP10.04□□□□□ -0.8
RAB40B-210ENST00000576148 IL6STP40189 918 aaPredicted RBP10.03□□□□□ -0.8
RAB40B-210ENST00000576148 TNIP1Q15025 636 aa10.03□□□□□ -0.8
RAB40B-210ENST00000576148 AOC3Q16853 763 aa10.03□□□□□ -0.8
RAB40B-210ENST00000576148 SNED1Q8TER0 1413 aa10.03□□□□□ -0.8
RAB40B-210ENST00000576148 ARMC5Q96C12 935 aa10.03□□□□□ -0.8
RAB40B-210ENST00000576148 VPS33BQ9H267 617 aa10.03□□□□□ -0.8
RAB40B-210ENST00000576148 KIAA0100Q14667 2235 aaKnown RBP10.02□□□□□ -0.81
RAB40B-210ENST00000576148 ADM5C9JUS6 153 aa10.02□□□□□ -0.81
RAB40B-210ENST00000576148 SLC24A1O60721 1099 aa10.02□□□□□ -0.81
RAB40B-210ENST00000576148 TM4SF4P48230 202 aa10.02□□□□□ -0.81
RAB40B-210ENST00000576148 OTOP1Q7RTM1 612 aa10.02□□□□□ -0.81
RAB40B-210ENST00000576148 MPNDQ8N594 471 aa10.02□□□□□ -0.81
RAB40B-210ENST00000576148 TMX4Q9H1E5 349 aaPredicted RBP10.02□□□□□ -0.81
RAB40B-210ENST00000576148 RANBP2P49792 3224 aaKnown RBP10.01□□□□□ -0.81
RAB40B-210ENST00000576148 GTF2E1P29083 439 aaPredicted RBP10.01□□□□□ -0.81
RAB40B-210ENST00000576148 CLEC4GQ6UXB4 293 aa10.01□□□□□ -0.81
RAB40B-210ENST00000576148 DZIP3Q86Y13 1208 aaKnown RBP10.01□□□□□ -0.81
RAB40B-210ENST00000576148 SULF1Q8IWU6 871 aa10.01□□□□□ -0.81
RAB40B-210ENST00000576148 MICALL2Q8IY33 904 aa10.01□□□□□ -0.81
RAB40B-210ENST00000576148 DPF3Q92784 378 aa10.01□□□□□ -0.81
RAB40B-210ENST00000576148 TEX13AQ9BXU3 409 aaPredicted RBP10.01□□□□□ -0.81
RAB40B-210ENST00000576148 POLKQ9UBT6 870 aa10.01□□□□□ -0.81
RAB40B-210ENST00000576148 ZNF652Q9Y2D9 606 aa10.01□□□□□ -0.81
RAB40B-210ENST00000576148 STXBP5LQ9Y2K9 1186 aa10.01□□□□□ -0.81
RAB40B-210ENST00000576148 SHTN1A0MZ66 631 aa10□□□□□ -0.81
RAB40B-210ENST00000576148 RAD17O75943 681 aa10□□□□□ -0.81
RAB40B-210ENST00000576148 FKBP1BP68106 108 aa10□□□□□ -0.81
RAB40B-210ENST00000576148 SLC4A8Q2Y0W8 1093 aa10□□□□□ -0.81
RAB40B-210ENST00000576148 SAMD7Q7Z3H4 446 aa10□□□□□ -0.81
RAB40B-210ENST00000576148 TTC5Q8N0Z6 440 aa10□□□□□ -0.81
RAB40B-210ENST00000576148 CFHR5Q9BXR6 569 aa10□□□□□ -0.81
RAB40B-210ENST00000576148 PRO3102Q9H379 93 aa10□□□□□ -0.81
RAB40B-210ENST00000576148 PTPN22Q9Y2R2 807 aa10□□□□□ -0.81
RAB40B-210ENST00000576148 ANKRD26Q9UPS8 1709 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 PAPPA2Q9BXP8 1791 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 A0A1W2PPC1 479 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 FAM177BA6PVY3 158 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 SOX1O00570 391 aaPredicted RBP9.99□□□□□ -0.81
RAB40B-210ENST00000576148 TCERG1O14776 1098 aaKnown RBP9.99□□□□□ -0.81
RAB40B-210ENST00000576148 COL9A1P20849 921 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 TNNT2P45379 298 aaPredicted RBP9.99□□□□□ -0.81
RAB40B-210ENST00000576148 SREBF2Q12772 1141 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 TBC1D10BQ4KMP7 808 aaPredicted RBP9.99□□□□□ -0.81
RAB40B-210ENST00000576148 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.99□□□□□ -0.81
RAB40B-210ENST00000576148 SUPT20HQ8NEM7 779 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 RPGRQ92834 1020 aaKnown RBP9.99□□□□□ -0.81
RAB40B-210ENST00000576148 LRCH3Q96II8 777 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 R3HDMLQ9H3Y0 253 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 LGR6Q9HBX8 967 aa9.99□□□□□ -0.81
RAB40B-210ENST00000576148 A1BGP04217 495 aa9.98□□□□□ -0.81
RAB40B-210ENST00000576148 CRY2Q49AN0 593 aa9.98□□□□□ -0.81
RAB40B-210ENST00000576148 RBM26Q5T8P6 1007 aaKnown RBP9.98□□□□□ -0.81
RAB40B-210ENST00000576148 DEFB123Q8N688 67 aa9.98□□□□□ -0.81
RAB40B-210ENST00000576148 CDCA5Q96FF9 252 aa9.98□□□□□ -0.81
RAB40B-210ENST00000576148 NIP7Q9Y221 180 aaKnown RBP eCLIP9.98□□□□□ -0.81
RAB40B-210ENST00000576148 SCN7AQ01118 1682 aa9.98□□□□□ -0.81
RAB40B-210ENST00000576148 PPEF1O14829 653 aaPredicted RBP9.97□□□□□ -0.81
RAB40B-210ENST00000576148 RNMTO43148 476 aaKnown RBP9.97□□□□□ -0.81
RAB40B-210ENST00000576148 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
RAB40B-210ENST00000576148 NBPF11Q86T75 865 aa9.97□□□□□ -0.81
RAB40B-210ENST00000576148 DPF2Q92785 391 aa9.97□□□□□ -0.81
RAB40B-210ENST00000576148 BRCA2P51587 3418 aa9.97□□□□□ -0.81
RAB40B-210ENST00000576148 HTTP42858 3142 aa9.96□□□□□ -0.81
RAB40B-210ENST00000576148 RBBP6Q7Z6E9 1792 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms