RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 ITGBL1O95965 494 aaPredicted RBP19.42■□□□□ 0.7
TSR1-204ENST00000576112 ALDH1B1P30837 517 aa19.42■□□□□ 0.7
TSR1-204ENST00000576112 EPHX2P34913 555 aa19.42■□□□□ 0.7
TSR1-204ENST00000576112 SUSD4Q5VX71 490 aa19.42■□□□□ 0.7
TSR1-204ENST00000576112 HACL1Q9UJ83 578 aa19.42■□□□□ 0.7
TSR1-204ENST00000576112 NTSR2O95665 410 aa19.41■□□□□ 0.7
TSR1-204ENST00000576112 NEFMP07197 916 aa19.41■□□□□ 0.7
TSR1-204ENST00000576112 LRP10Q7Z4F1 713 aa19.41■□□□□ 0.7
TSR1-204ENST00000576112 PSMD1Q99460 953 aa19.41■□□□□ 0.7
TSR1-204ENST00000576112 ZNF34Q8IZ26 560 aa19.4■□□□□ 0.7
TSR1-204ENST00000576112 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
TSR1-204ENST00000576112 TAF1P21675 1872 aa19.39■□□□□ 0.7
TSR1-204ENST00000576112 HOXA10P31260 410 aaPredicted RBP19.39■□□□□ 0.69
TSR1-204ENST00000576112 RPGRQ92834 1020 aaKnown RBP19.39■□□□□ 0.69
TSR1-204ENST00000576112 ANXA1P04083 346 aa19.38■□□□□ 0.69
TSR1-204ENST00000576112 PDIA6Q15084 440 aa19.38■□□□□ 0.69
TSR1-204ENST00000576112 PROSER3Q2NL68 480 aa19.38■□□□□ 0.69
TSR1-204ENST00000576112 MAP1SQ66K74 1059 aaPredicted RBP19.38■□□□□ 0.69
TSR1-204ENST00000576112 GIGYF2Q6Y7W6 1299 aaKnown RBP19.38■□□□□ 0.69
TSR1-204ENST00000576112 GPC2Q8N158 579 aa19.38■□□□□ 0.69
TSR1-204ENST00000576112 TSPYL4Q9UJ04 414 aa19.38■□□□□ 0.69
TSR1-204ENST00000576112 CLEC11AQ9Y240 323 aa19.38■□□□□ 0.69
TSR1-204ENST00000576112 THSD7BQ9C0I4 1608 aa19.37■□□□□ 0.69
TSR1-204ENST00000576112 ERBB4Q15303 1308 aa19.37■□□□□ 0.69
TSR1-204ENST00000576112 TCERG1O14776 1098 aaKnown RBP19.37■□□□□ 0.69
TSR1-204ENST00000576112 PPEF1O14829 653 aaPredicted RBP19.37■□□□□ 0.69
TSR1-204ENST00000576112 FOXN1O15353 648 aa19.37■□□□□ 0.69
TSR1-204ENST00000576112 TRPM7Q96QT4 1865 aa19.37■□□□□ 0.69
TSR1-204ENST00000576112 TMEM88BA6NKF7 163 aa19.36■□□□□ 0.69
TSR1-204ENST00000576112 VEGFBP49765 207 aa19.36■□□□□ 0.69
TSR1-204ENST00000576112 GJA3Q9Y6H8 435 aa19.36■□□□□ 0.69
TSR1-204ENST00000576112 DDX60Q8IY21 1712 aaKnown RBP19.36■□□□□ 0.69
TSR1-204ENST00000576112 JDP2Q8WYK2 163 aa19.35■□□□□ 0.69
TSR1-204ENST00000576112 CRAMP1Q96RY5 1269 aa19.35■□□□□ 0.69
TSR1-204ENST00000576112 EIF2S2P20042 333 aaKnown RBP19.34■□□□□ 0.69
TSR1-204ENST00000576112 SCNN1DP51172 638 aa19.34■□□□□ 0.69
TSR1-204ENST00000576112 CC2D2BQ6DHV5 1058 aa19.34■□□□□ 0.69
TSR1-204ENST00000576112 PNMA8AQ86V59 439 aaPredicted RBP19.34■□□□□ 0.69
TSR1-204ENST00000576112 CNTROBQ8N137 903 aa19.34■□□□□ 0.69
TSR1-204ENST00000576112 RBM17Q96I25 401 aaKnown RBP19.34■□□□□ 0.69
TSR1-204ENST00000576112 LRRC37AA6NMS7 1700 aa19.34■□□□□ 0.69
TSR1-204ENST00000576112 DUOX1Q9NRD9 1551 aa19.33■□□□□ 0.69
TSR1-204ENST00000576112 EIF6P56537 245 aaKnown RBP19.33■□□□□ 0.68
TSR1-204ENST00000576112 FMR1Q06787 632 aaKnown RBP eCLIP19.33■□□□□ 0.68
TSR1-204ENST00000576112 LARGE2Q8N3Y3 721 aa19.33■□□□□ 0.68
TSR1-204ENST00000576112 COL4A1P02462 1669 aa19.33■□□□□ 0.68
TSR1-204ENST00000576112 ABCC4O15439 1325 aa19.32■□□□□ 0.68
TSR1-204ENST00000576112 EPS15P42566 896 aa19.32■□□□□ 0.68
TSR1-204ENST00000576112 RIPK4P57078 832 aa19.32■□□□□ 0.68
TSR1-204ENST00000576112 AOC3Q16853 763 aa19.32■□□□□ 0.68
TSR1-204ENST00000576112 PPP1R42Q7Z4L9 355 aa19.32■□□□□ 0.68
TSR1-204ENST00000576112 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
TSR1-204ENST00000576112 KRT24Q2M2I5 525 aa19.31■□□□□ 0.68
TSR1-204ENST00000576112 PARP10Q53GL7 1025 aa19.31■□□□□ 0.68
TSR1-204ENST00000576112 PNNQ9H307 717 aaKnown RBP19.31■□□□□ 0.68
TSR1-204ENST00000576112 RASSF10A6NK89 507 aa19.3■□□□□ 0.68
TSR1-204ENST00000576112 TMPOP42166 694 aaKnown RBP19.3■□□□□ 0.68
TSR1-204ENST00000576112 UTP14AQ9BVJ6 771 aaKnown RBP19.3■□□□□ 0.68
TSR1-204ENST00000576112 PPIP5K2O43314 1243 aa19.29■□□□□ 0.68
TSR1-204ENST00000576112 LMOD1P29536 600 aaPredicted RBP19.29■□□□□ 0.68
TSR1-204ENST00000576112 NIM1KQ8IY84 436 aa19.29■□□□□ 0.68
TSR1-204ENST00000576112 ZNF428Q96B54 188 aa19.29■□□□□ 0.68
TSR1-204ENST00000576112 ATP6V0A2Q9Y487 856 aa19.29■□□□□ 0.68
TSR1-204ENST00000576112 HCLS1P14317 486 aaPredicted RBP19.28■□□□□ 0.68
TSR1-204ENST00000576112 AIMP1Q12904 312 aaKnown RBP19.28■□□□□ 0.68
TSR1-204ENST00000576112 SLC10A5Q5PT55 438 aa19.28■□□□□ 0.68
TSR1-204ENST00000576112 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
TSR1-204ENST00000576112 CCDC146Q8IYE0 955 aa19.28■□□□□ 0.68
TSR1-204ENST00000576112 XAGE3Q8WTP9 111 aa19.28■□□□□ 0.68
TSR1-204ENST00000576112 NLRP3Q96P20 1036 aa19.28■□□□□ 0.68
TSR1-204ENST00000576112 DDX21Q9NR30 783 aaKnown RBP eCLIP19.28■□□□□ 0.68
TSR1-204ENST00000576112 TRAF5O00463 557 aa19.27■□□□□ 0.68
TSR1-204ENST00000576112 GRIPAP1Q4V328 841 aa19.27■□□□□ 0.68
TSR1-204ENST00000576112 COPS6Q7L5N1 327 aa19.27■□□□□ 0.68
TSR1-204ENST00000576112 WBP1LQ9NX94 342 aa19.27■□□□□ 0.68
TSR1-204ENST00000576112 ABT1Q9ULW3 272 aaKnown RBP19.27■□□□□ 0.68
TSR1-204ENST00000576112 DEFB115Q30KQ5 88 aa19.26■□□□□ 0.67
TSR1-204ENST00000576112 AIDAQ96BJ3 306 aa19.26■□□□□ 0.67
TSR1-204ENST00000576112 WDR33Q9C0J8 1336 aaKnown RBP19.25■□□□□ 0.67
TSR1-204ENST00000576112 CTCFP49711 727 aaPredicted RBP19.25■□□□□ 0.67
TSR1-204ENST00000576112 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
TSR1-204ENST00000576112 RTFDC1Q9BY42 306 aaPredicted RBP19.25■□□□□ 0.67
TSR1-204ENST00000576112 PRDM10Q9NQV6 1147 aa19.25■□□□□ 0.67
TSR1-204ENST00000576112 BABAM1Q9NWV8 329 aa19.25■□□□□ 0.67
TSR1-204ENST00000576112 GPRC5DQ9NZD1 345 aa19.25■□□□□ 0.67
TSR1-204ENST00000576112 LBX1P52954 281 aa19.24■□□□□ 0.67
TSR1-204ENST00000576112 CXCL9Q07325 125 aa19.24■□□□□ 0.67
TSR1-204ENST00000576112 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
TSR1-204ENST00000576112 RALBP1Q15311 655 aa19.24■□□□□ 0.67
TSR1-204ENST00000576112 CHPF2Q9P2E5 772 aa19.24■□□□□ 0.67
TSR1-204ENST00000576112 HSPA8P11142 646 aaKnown RBP19.23■□□□□ 0.67
TSR1-204ENST00000576112 CST9Q5W186 159 aa19.23■□□□□ 0.67
TSR1-204ENST00000576112 USP50Q70EL3 339 aaPredicted RBP19.23■□□□□ 0.67
TSR1-204ENST00000576112 TRIM35Q9UPQ4 493 aa19.23■□□□□ 0.67
TSR1-204ENST00000576112 CHL1O00533 1208 aa19.22■□□□□ 0.67
TSR1-204ENST00000576112 GMPSP49915 693 aaPredicted RBP19.22■□□□□ 0.67
TSR1-204ENST00000576112 TCIRG1Q13488 830 aa19.22■□□□□ 0.67
TSR1-204ENST00000576112 HSP90AB3PQ58FF7 597 aa19.22■□□□□ 0.67
TSR1-204ENST00000576112 DPP8Q6V1X1 898 aaPredicted RBP19.22■□□□□ 0.67
TSR1-204ENST00000576112 TRMT112Q9UI30 125 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms