RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 C8orf58Q8NAV2 365 aa14.73□□□□□ -0.05
RPAIN-214ENST00000574003 UTP14AQ9BVJ6 771 aaKnown RBP14.73□□□□□ -0.05
RPAIN-214ENST00000574003 IFT57Q9NWB7 429 aa14.73□□□□□ -0.05
RPAIN-214ENST00000574003 IBTKQ9P2D0 1353 aaPredicted RBP14.73□□□□□ -0.05
RPAIN-214ENST00000574003 LTBP3Q9NS15 1303 aa14.72□□□□□ -0.05
RPAIN-214ENST00000574003 POTECB2RU33 542 aa14.72□□□□□ -0.05
RPAIN-214ENST00000574003 ATP5J2-PTCD1G3V325 749 aa14.72□□□□□ -0.05
RPAIN-214ENST00000574003 HCLS1P14317 486 aaPredicted RBP14.72□□□□□ -0.05
RPAIN-214ENST00000574003 TCIRG1Q13488 830 aa14.72□□□□□ -0.05
RPAIN-214ENST00000574003 PARP10Q53GL7 1025 aa14.72□□□□□ -0.05
RPAIN-214ENST00000574003 PPP1R42Q7Z4L9 355 aa14.72□□□□□ -0.05
RPAIN-214ENST00000574003 C16orf71Q8IYS4 520 aaPredicted RBP14.72□□□□□ -0.05
RPAIN-214ENST00000574003 RPGRQ92834 1020 aaKnown RBP14.72□□□□□ -0.05
RPAIN-214ENST00000574003 TSR2Q969E8 191 aaKnown RBP14.72□□□□□ -0.05
RPAIN-214ENST00000574003 SALL2Q9Y467 1007 aaPredicted RBP14.72□□□□□ -0.05
RPAIN-214ENST00000574003 ANKRD36CQ5JPF3 1778 aa14.72□□□□□ -0.05
RPAIN-214ENST00000574003 ANP32CO43423 234 aa14.71□□□□□ -0.05
RPAIN-214ENST00000574003 DDNO94850 711 aaPredicted RBP14.71□□□□□ -0.05
RPAIN-214ENST00000574003 ALDH1B1P30837 517 aa14.71□□□□□ -0.05
RPAIN-214ENST00000574003 GNAI1P63096 354 aa14.71□□□□□ -0.05
RPAIN-214ENST00000574003 HTRA3P83110 453 aa14.71□□□□□ -0.05
RPAIN-214ENST00000574003 FKBP4Q02790 459 aaKnown RBP eCLIP14.71□□□□□ -0.05
RPAIN-214ENST00000574003 SOGA3Q5TF21 947 aa14.71□□□□□ -0.05
RPAIN-214ENST00000574003 TSPYL6Q8N831 410 aa14.71□□□□□ -0.05
RPAIN-214ENST00000574003 PHAXQ9H814 394 aaKnown RBP14.71□□□□□ -0.05
RPAIN-214ENST00000574003 ZC3H4Q9UPT8 1303 aaKnown RBP14.7□□□□□ -0.06
RPAIN-214ENST00000574003 HOXB7P09629 217 aa14.7□□□□□ -0.06
RPAIN-214ENST00000574003 PLBD2Q8NHP8 589 aa14.7□□□□□ -0.06
RPAIN-214ENST00000574003 RBM46Q8TBY0 533 aaKnown RBP14.7□□□□□ -0.06
RPAIN-214ENST00000574003 DBF4Q9UBU7 674 aaPredicted RBP14.7□□□□□ -0.06
RPAIN-214ENST00000574003 SNED1Q8TER0 1413 aa14.69□□□□□ -0.06
RPAIN-214ENST00000574003 HOXA10P31260 410 aaPredicted RBP14.69□□□□□ -0.06
RPAIN-214ENST00000574003 HSP90AB3PQ58FF7 597 aa14.69□□□□□ -0.06
RPAIN-214ENST00000574003 RTL5Q5HYW3 569 aaPredicted RBP14.69□□□□□ -0.06
RPAIN-214ENST00000574003 SLC10A5Q5PT55 438 aa14.69□□□□□ -0.06
RPAIN-214ENST00000574003 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
RPAIN-214ENST00000574003 RBM17Q96I25 401 aaKnown RBP14.69□□□□□ -0.06
RPAIN-214ENST00000574003 NLRP3Q96P20 1036 aa14.69□□□□□ -0.06
RPAIN-214ENST00000574003 TRMT112Q9UI30 125 aaKnown RBP14.69□□□□□ -0.06
RPAIN-214ENST00000574003 LAMB2P55268 1798 aa14.69□□□□□ -0.06
RPAIN-214ENST00000574003 TAF1P21675 1872 aa14.69□□□□□ -0.06
RPAIN-214ENST00000574003 ZNF541Q9H0D2 1346 aa14.68□□□□□ -0.06
RPAIN-214ENST00000574003 RIC1Q4ADV7 1423 aa14.68□□□□□ -0.06
RPAIN-214ENST00000574003 PPEF1O14829 653 aaPredicted RBP14.68□□□□□ -0.06
RPAIN-214ENST00000574003 VEGFAP15692 232 aaPredicted RBP14.68□□□□□ -0.06
RPAIN-214ENST00000574003 DPY19L2Q6NUT2 758 aa14.68□□□□□ -0.06
RPAIN-214ENST00000574003 WWC1Q8IX03 1113 aa14.68□□□□□ -0.06
RPAIN-214ENST00000574003 CRAMP1Q96RY5 1269 aa14.68□□□□□ -0.06
RPAIN-214ENST00000574003 ISCA1Q9BUE6 129 aa14.68□□□□□ -0.06
RPAIN-214ENST00000574003 COL4A5P29400 1685 aa14.68□□□□□ -0.06
RPAIN-214ENST00000574003 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
RPAIN-214ENST00000574003 POTEJP0CG39 1038 aa14.67□□□□□ -0.06
RPAIN-214ENST00000574003 IARSP41252 1262 aaKnown RBP14.67□□□□□ -0.06
RPAIN-214ENST00000574003 CALD1Q05682 793 aaKnown RBP14.67□□□□□ -0.06
RPAIN-214ENST00000574003 RTKN2Q8IZC4 609 aa14.67□□□□□ -0.06
RPAIN-214ENST00000574003 JARID2Q92833 1246 aaPredicted RBP14.67□□□□□ -0.06
RPAIN-214ENST00000574003 FAM89AQ96GI7 184 aa14.67□□□□□ -0.06
RPAIN-214ENST00000574003 HYPKQ9NX55 129 aa14.67□□□□□ -0.06
RPAIN-214ENST00000574003 ABCC4O15439 1325 aa14.66□□□□□ -0.06
RPAIN-214ENST00000574003 WDR90Q96KV7 1748 aa14.66□□□□□ -0.06
RPAIN-214ENST00000574003 SH3TC1Q8TE82 1336 aa14.66□□□□□ -0.06
RPAIN-214ENST00000574003 COL4A1P02462 1669 aa14.65□□□□□ -0.06
RPAIN-214ENST00000574003 RIC3Q7Z5B4 369 aa14.65□□□□□ -0.06
RPAIN-214ENST00000574003 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
RPAIN-214ENST00000574003 APLP1P51693 650 aa14.64□□□□□ -0.07
RPAIN-214ENST00000574003 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
RPAIN-214ENST00000574003 FSTL1Q12841 308 aa14.64□□□□□ -0.07
RPAIN-214ENST00000574003 FAM9BQ8IZU0 186 aa14.64□□□□□ -0.07
RPAIN-214ENST00000574003 SMC1BQ8NDV3 1235 aa14.64□□□□□ -0.07
RPAIN-214ENST00000574003 PSMD1Q99460 953 aa14.64□□□□□ -0.07
RPAIN-214ENST00000574003 MYD88Q99836 296 aa14.64□□□□□ -0.07
RPAIN-214ENST00000574003 CCDC27Q2M243 656 aa14.63□□□□□ -0.07
RPAIN-214ENST00000574003 G2E3Q7L622 706 aa14.63□□□□□ -0.07
RPAIN-214ENST00000574003 ATP6V0A2Q9Y487 856 aa14.63□□□□□ -0.07
RPAIN-214ENST00000574003 CCDC30Q5VVM6 783 aa14.62□□□□□ -0.07
RPAIN-214ENST00000574003 CC2D2BQ6DHV5 1058 aa14.62□□□□□ -0.07
RPAIN-214ENST00000574003 DDX46Q7L014 1031 aaKnown RBP14.62□□□□□ -0.07
RPAIN-214ENST00000574003 DNAJC5GQ8N7S2 189 aa14.62□□□□□ -0.07
RPAIN-214ENST00000574003 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
RPAIN-214ENST00000574003 RNF123Q5XPI4 1314 aa14.62□□□□□ -0.07
RPAIN-214ENST00000574003 FZD9O00144 591 aa14.61□□□□□ -0.07
RPAIN-214ENST00000574003 IRS4O14654 1257 aaPredicted RBP14.61□□□□□ -0.07
RPAIN-214ENST00000574003 GRAPQ13588 217 aa14.61□□□□□ -0.07
RPAIN-214ENST00000574003 AOC3Q16853 763 aa14.61□□□□□ -0.07
RPAIN-214ENST00000574003 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
RPAIN-214ENST00000574003 LARGE2Q8N3Y3 721 aa14.61□□□□□ -0.07
RPAIN-214ENST00000574003 GRAPLQ8TC17 118 aaPredicted RBP14.61□□□□□ -0.07
RPAIN-214ENST00000574003 CELF1Q92879 486 aaKnown RBP14.61□□□□□ -0.07
RPAIN-214ENST00000574003 GJA3Q9Y6H8 435 aa14.61□□□□□ -0.07
RPAIN-214ENST00000574003 FANCIQ9NVI1 1328 aa14.61□□□□□ -0.07
RPAIN-214ENST00000574003 PPIP5K2O43314 1243 aa14.6□□□□□ -0.07
RPAIN-214ENST00000574003 JDP2Q8WYK2 163 aa14.6□□□□□ -0.07
RPAIN-214ENST00000574003 CCDC85AQ96PX6 553 aaPredicted RBP14.6□□□□□ -0.07
RPAIN-214ENST00000574003 TAF1DQ9H5J8 278 aaPredicted RBP14.6□□□□□ -0.07
RPAIN-214ENST00000574003 MAP3K2Q9Y2U5 619 aa14.6□□□□□ -0.07
RPAIN-214ENST00000574003 BBOX1O75936 387 aa14.59□□□□□ -0.07
RPAIN-214ENST00000574003 TRIM28Q13263 835 aaKnown RBP14.59□□□□□ -0.07
RPAIN-214ENST00000574003 EAPPQ56P03 285 aaPredicted RBP14.59□□□□□ -0.07
RPAIN-214ENST00000574003 SP8Q8IXZ3 490 aa14.59□□□□□ -0.07
RPAIN-214ENST00000574003 MPNDQ8N594 471 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms