RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 MIER1Q8N108 512 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 TSR2Q969E8 191 aaKnown RBP10.05□□□□□ -0.8
SMG6-211ENST00000572369 CHMP4AQ9BY43 222 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 CARMIL3Q8ND23 1372 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 FAM177BA6PVY3 158 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 ANXA1P04083 346 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 LMNB1P20700 586 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 RASSF7Q02833 373 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 CLEC4GQ6UXB4 293 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 WDR63Q8IWG1 891 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 ZBTB3Q9H5J0 574 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 PIM2Q9P1W9 311 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 IL16Q14005 1332 aa10.04□□□□□ -0.8
SMG6-211ENST00000572369 GTF2E1P29083 439 aaPredicted RBP10.03□□□□□ -0.8
SMG6-211ENST00000572369 ST5P78524 1137 aa10.03□□□□□ -0.8
SMG6-211ENST00000572369 TTLL7Q6ZT98 887 aa10.03□□□□□ -0.8
SMG6-211ENST00000572369 C8orf58Q8NAV2 365 aa10.03□□□□□ -0.8
SMG6-211ENST00000572369 MYH16Q9H6N6 1097 aa10.03□□□□□ -0.8
SMG6-211ENST00000572369 DDX21Q9NR30 783 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMG6-211ENST00000572369 CHPF2Q9P2E5 772 aa10.03□□□□□ -0.8
SMG6-211ENST00000572369 DBF4Q9UBU7 674 aaPredicted RBP10.03□□□□□ -0.8
SMG6-211ENST00000572369 NIP7Q9Y221 180 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMG6-211ENST00000572369 MAP3K15Q6ZN16 1313 aa10.03□□□□□ -0.8
SMG6-211ENST00000572369 NRXN2Q9P2S2 1712 aa10.02□□□□□ -0.8
SMG6-211ENST00000572369 ERVV-1B6SEH8 477 aa10.02□□□□□ -0.81
SMG6-211ENST00000572369 GOLGA2Q08379 1002 aa10.02□□□□□ -0.81
SMG6-211ENST00000572369 HLFQ16534 295 aa10.02□□□□□ -0.81
SMG6-211ENST00000572369 PROSER3Q2NL68 480 aa10.02□□□□□ -0.81
SMG6-211ENST00000572369 CCDC30Q5VVM6 783 aa10.02□□□□□ -0.81
SMG6-211ENST00000572369 COPS6Q7L5N1 327 aa10.02□□□□□ -0.81
SMG6-211ENST00000572369 NBPF5PQ86XG9 351 aaPredicted RBP10.02□□□□□ -0.81
SMG6-211ENST00000572369 CNBD1Q8NA66 436 aa10.02□□□□□ -0.81
SMG6-211ENST00000572369 XAGE3Q8WTP9 111 aa10.02□□□□□ -0.81
SMG6-211ENST00000572369 HYPKQ9NX55 129 aa10.02□□□□□ -0.81
SMG6-211ENST00000572369 ANKRD36CQ5JPF3 1778 aa10.01□□□□□ -0.81
SMG6-211ENST00000572369 CASP8AP2Q9UKL3 1982 aa10.01□□□□□ -0.81
SMG6-211ENST00000572369 CA12O43570 354 aa10.01□□□□□ -0.81
SMG6-211ENST00000572369 ITGBL1O95965 494 aaPredicted RBP10.01□□□□□ -0.81
SMG6-211ENST00000572369 GPTP24298 496 aa10.01□□□□□ -0.81
SMG6-211ENST00000572369 PDIA6Q15084 440 aa10.01□□□□□ -0.81
SMG6-211ENST00000572369 TWISTNBQ3B726 338 aaPredicted RBP10.01□□□□□ -0.81
SMG6-211ENST00000572369 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
SMG6-211ENST00000572369 CCDC24Q8N4L8 307 aa10.01□□□□□ -0.81
SMG6-211ENST00000572369 STK31Q9BXU1 1019 aa10.01□□□□□ -0.81
SMG6-211ENST00000572369 FANCIQ9NVI1 1328 aa10.01□□□□□ -0.81
SMG6-211ENST00000572369 H0YIN7 160 aa10□□□□□ -0.81
SMG6-211ENST00000572369 RGL2O15211 777 aa10□□□□□ -0.81
SMG6-211ENST00000572369 CHRNA5P30532 468 aa10□□□□□ -0.81
SMG6-211ENST00000572369 PDE6BP35913 854 aa10□□□□□ -0.81
SMG6-211ENST00000572369 PRR5LQ6MZQ0 368 aa10□□□□□ -0.81
SMG6-211ENST00000572369 TPTE2Q6XPS3 522 aa10□□□□□ -0.81
SMG6-211ENST00000572369 GIGYF2Q6Y7W6 1299 aaKnown RBP10□□□□□ -0.81
SMG6-211ENST00000572369 LDHDQ86WU2 507 aa10□□□□□ -0.81
SMG6-211ENST00000572369 TSPYL6Q8N831 410 aa10□□□□□ -0.81
SMG6-211ENST00000572369 NYXQ9GZU5 481 aa10□□□□□ -0.81
SMG6-211ENST00000572369 ABT1Q9ULW3 272 aaKnown RBP10□□□□□ -0.81
SMG6-211ENST00000572369 CACNA1SQ13698 1873 aa10□□□□□ -0.81
SMG6-211ENST00000572369 TCERG1O14776 1098 aaKnown RBP9.99□□□□□ -0.81
SMG6-211ENST00000572369 EXOSC9Q06265 439 aaKnown RBP9.99□□□□□ -0.81
SMG6-211ENST00000572369 HSP90AB3PQ58FF7 597 aa9.99□□□□□ -0.81
SMG6-211ENST00000572369 RIC3Q7Z5B4 369 aa9.99□□□□□ -0.81
SMG6-211ENST00000572369 C2CD5Q86YS7 1000 aa9.99□□□□□ -0.81
SMG6-211ENST00000572369 MPNDQ8N594 471 aa9.99□□□□□ -0.81
SMG6-211ENST00000572369 CAPNS2Q96L46 248 aa9.99□□□□□ -0.81
SMG6-211ENST00000572369 GPR101Q96P66 508 aaPredicted RBP9.99□□□□□ -0.81
SMG6-211ENST00000572369 ANKRD31Q8N7Z5 1873 aa9.99□□□□□ -0.81
SMG6-211ENST00000572369 ARFGEF2Q9Y6D5 1785 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 COL6A3P12111 3177 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 DDX58O95786 925 aaKnown RBP9.98□□□□□ -0.81
SMG6-211ENST00000572369 ECE1P42892 770 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 ANKRD13DQ6ZTN6 518 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 LRP10Q7Z4F1 713 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 PPP1R42Q7Z4L9 355 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 PLBD2Q8NHP8 589 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 ZNF622Q969S3 477 aaKnown RBP eCLIP9.98□□□□□ -0.814e-6■■■■□ 24.2
SMG6-211ENST00000572369 BRIP1Q9BX63 1249 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 PHAXQ9H814 394 aaKnown RBP9.98□□□□□ -0.81
SMG6-211ENST00000572369 PDZRN3Q9UPQ7 1066 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 DLEC1Q9Y238 1755 aa9.98□□□□□ -0.81
SMG6-211ENST00000572369 CACNA1FO60840 1977 aa9.97□□□□□ -0.81
SMG6-211ENST00000572369 E9PSI1 815 aa9.97□□□□□ -0.81
SMG6-211ENST00000572369 MNX1P50219 401 aaPredicted RBP9.97□□□□□ -0.81
SMG6-211ENST00000572369 GRM1Q13255 1194 aa9.97□□□□□ -0.81
SMG6-211ENST00000572369 PARP10Q53GL7 1025 aa9.97□□□□□ -0.81
SMG6-211ENST00000572369 PAXIP1Q6ZW49 1069 aaPredicted RBP9.97□□□□□ -0.81
SMG6-211ENST00000572369 NUTM1Q86Y26 1132 aa9.97□□□□□ -0.81
SMG6-211ENST00000572369 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
SMG6-211ENST00000572369 SLC4A2P04920 1241 aa9.96□□□□□ -0.82
SMG6-211ENST00000572369 TCIRG1Q13488 830 aa9.96□□□□□ -0.82
SMG6-211ENST00000572369 SUSD4Q5VX71 490 aa9.96□□□□□ -0.82
SMG6-211ENST00000572369 CYP4F22Q6NT55 531 aa9.96□□□□□ -0.82
SMG6-211ENST00000572369 ZNF34Q8IZ26 560 aa9.96□□□□□ -0.82
SMG6-211ENST00000572369 TTLL6Q8N841 843 aa9.96□□□□□ -0.82
SMG6-211ENST00000572369 ZNF428Q96B54 188 aa9.96□□□□□ -0.82
SMG6-211ENST00000572369 UTP14AQ9BVJ6 771 aaKnown RBP9.96□□□□□ -0.82
SMG6-211ENST00000572369 COL11A2P13942 1736 aaPredicted RBP9.96□□□□□ -0.82
SMG6-211ENST00000572369 ATP5J2-PTCD1G3V325 749 aa9.95□□□□□ -0.82
SMG6-211ENST00000572369 VAMP4O75379 141 aa9.95□□□□□ -0.82
SMG6-211ENST00000572369 HNRNPUQ00839 825 aaKnown RBP eCLIP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms